| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313834
Identifier: 158313834
GI number: 158313834
Start: 2402593
End: 2405163
Strand: Direct
Name: 158313834
Synonym: Franean1_1999
Alternate gene names: NA
Gene position: 2402593-2405163 (Clockwise)
Preceding gene: 158313830
Following gene: 158313836
Centisome position: 26.75
GC content: 76.9
Gene sequence:
>2571_bases ATGGCCGGACGGCGGGCGGCGGCCCTGCGGAAACCGCGCGGGTCGGCCGACAGCTACCTCGACTTCGTCCAGGGCCTGGA CGAAGCGGCCCTCACCGCCGTCCTGCGGGCCCGCCAGGACGTCCTCGAGGACCCGCCGCGCGGAGTCGGTGAGCTCGTGC GCCGGCTCGGGGACGCGGACTCGATGCTCGCCGCCGTCAACGACCTGGACCGCGACGGGCTCCTGCTGTGCGACGCGGTC ATGATGCTGGGCCCACCCGTCCCGCTGGACCGGCTGGTGATCCTGCTCGGCGGGTCCAGGGACGGGATCCGCGCGGCGCT GCGCCCGGTCACCCGGCGGGCGCTGCTCTGGGAGAGCGACGGCGTCGTCCACGCCTTCGAGCCGTTCCGGCGGCTGTGGG ACGACGAGGTCGCGGTGTGGCACCCGGCCGCGGAGCTCATCCCGGCCATCTCCGTCACCGACCTGCGCCGTGCCGCCCGC GGGCTCGTTCCCGGGGCCCGGGTCACCTCGTCCACGACCTGGGAGCGGTCCGCCCGCGTCGTCGGGGAGCTGATGGCCGA CCCGGACGGCGTCGTCGCCGCGGTGCAACGGCTGCCCCGGCCGGCCCGCGACCTGCTGGCCGAACTGGTCCGCGACCCGA CGGGTCTGGCGACCGGCGACGAGCCCGACGACGCCCTCGGTACAGGTACAGGTGCCTTCGGTACGAACGGCTTCGATGGC GGGGCCCGTGGGCGGCTCCCGGCCGGGTCGAACCCGGAGGAAGCGGCCGGGATACTCGTCGAGTCCGGGCTGCTCCTGCT CGTCGACGGTGAGATCGAGGTGCCCCGGGAGGTCGTGACTGTCCTGTGGGCGGCAGACCCGGAGGTCCGGCTGACCGGGC CGCCGAGCCTCGGCCCGGCGGGCGCGGACCGCGCGGACGAGACGTTCGCCGCCGGGATCCAGGCCGCCGCCGGGCACGCC CTGCGGTCGGTGGCGTCGCTGCTCGCCGAGGCGGAGCGGGCGCCGCTCGCCGCGCTGAAGAAGGGCGGCATCGGCACCCG GGAACGCGCCCGGCTGGCCCGGACCCTCGCGCTCACGGAGGATGAGCTCCCGCTCTGGATCGACGTCGCCCACGCCGCGG GGCTGCTGGCCCGCGAGGAGGGCGGCTACGCGCCGACCGGCGAGTACCCCGGCTGGCGCGGGTCGGACGTCGGACGTCGC TGGGCGGTGCTCGCCCTGGCCTGGTTCCTCCTCGACCAGTCCCCGACACACCGTGAGATCGACAGCGGCCGGGACCAGCC GCCGCCGCTCCCGCTCGCCTCCGGCGCGGGCCGGGTGCGCCGGACGCTGCTCACCACGGCCAGCCCCGGCCGGTCGCTGG CCGCCGCGGGCAGCCACCTCGAGTGGTTCCTGCCGCTGCACGGCTACGACCGGCCCCAGCTGGCGAACAAGCGCCGGGCC GCCGTCCGGGAGGCCGAGCTGCTCGGCGTCGCCGCCGGGGACACCGTCTCCGATCTCGGTGTCGCGGTCTGCGAGGTCCT CGCGGCGGCGCCGCTCGACCCGACCGGGCAGATGCGGGCCCACCAGTACGGCTCCCCGACGCCCACGCTGGCCGGGTTCG TCACCGGAACCCTCGGGCCGCTGGTGGACGAGCTGGCCCGCCGGTGCGGCCCCGCCCTGCCGCGCGACGCTTCCACCATG ATCCTGCAGTCCGATCTGACCGCGACCGTGGCCGGCCAGCCCAACCACGCGATCGCCCGCCTGCTCGCCGACGCGGCCGT GTCGGAGTCGCGCGGCGCCGCCGGGACGTGGCGGTTCACCTCCGCGAGCATCCGCGGCGCGCTGGACGTCGGCTGGAGCG CGCAGGAGCTGCTCGACGAGCTGCGCGCCGGCGCGGCGCACGAGGTGCCTCAAGGGCTCGAGTACCTCGTGGCGGACGTC GCCCGCCGCCACGGCCACATCCGCGCGCGGGCGGTGCGGGCCGCGGTCGTCGCGGACGAGGCGACGATCAACGAGATCCT GGCGACCCGGGCGCTGCGGTCGCTGGACCTGCGGCGACTGGCACCGACCGTCGCGGCGTGCGGCGCGGACGCCGAGGACG TGGCCGAACGCCTGCGCGCCGCGGGCATGGCTCCGGTGGTCGAGGACGAGCACGGCACCGTCGTCATCCGCCGGCGGTCG GGCGGCCAGCCGGCCTCGGGTCGCGACGCAGCCGCGGGGGCGGCTTCGGAGCGTGGCAGCGCGGGGAGTGCGGGCGAGTC CGGAACGTGGGCGGCTCCGGCGGATGTGGCGCGGCGCATCCTCGCGAACCGGGCCGGCGCCGGCGACGCCGCCCGGGCCG ACCCGCGCGTCGTACGCCAGCTCGGCCGGCTGAACCCGCGGCTCACCCTCGCCGAGCGCCAGCTCCTCGCCGCCGCGCTC AACCACGGCGAGATCGTGACGATCATCTACCGGGACCGGTTCGAACGGCGGACCAGCCGTCTGATCGCCCCGGTGGAGCT GCTCGGCGGGCGTCTCGACTCCTGGTGCCACCTCCGCGAGGCGCGGCGCGAGTTCGCCGTCGCCCGCATCGAGGGGGTCA CACCCGGCTGA
Upstream 100 bases:
>100_bases TGTCCGACGAGCCGGTCGCCGACACATCTGACGGTCGTGGCGGGGCGAGTGCGACGCGCCGCACCCGGCATGGTCGAACC GACGACGACGGGAGCGTCAC
Downstream 100 bases:
>100_bases GCGGGTCAGGGGCGGTGGCGCAGGCTTCCCGCCGGGCGCCCGCCGGCCTCGTCCTCGGACTGGTAGTCGAGGGCGCCGTC CGCCGCGAGGCGCAGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MAGRRAAALRKPRGSADSYLDFVQGLDEAALTAVLRARQDVLEDPPRGVGELVRRLGDADSMLAAVNDLDRDGLLLCDAV MMLGPPVPLDRLVILLGGSRDGIRAALRPVTRRALLWESDGVVHAFEPFRRLWDDEVAVWHPAAELIPAISVTDLRRAAR GLVPGARVTSSTTWERSARVVGELMADPDGVVAAVQRLPRPARDLLAELVRDPTGLATGDEPDDALGTGTGAFGTNGFDG GARGRLPAGSNPEEAAGILVESGLLLLVDGEIEVPREVVTVLWAADPEVRLTGPPSLGPAGADRADETFAAGIQAAAGHA LRSVASLLAEAERAPLAALKKGGIGTRERARLARTLALTEDELPLWIDVAHAAGLLAREEGGYAPTGEYPGWRGSDVGRR WAVLALAWFLLDQSPTHREIDSGRDQPPPLPLASGAGRVRRTLLTTASPGRSLAAAGSHLEWFLPLHGYDRPQLANKRRA AVREAELLGVAAGDTVSDLGVAVCEVLAAAPLDPTGQMRAHQYGSPTPTLAGFVTGTLGPLVDELARRCGPALPRDASTM ILQSDLTATVAGQPNHAIARLLADAAVSESRGAAGTWRFTSASIRGALDVGWSAQELLDELRAGAAHEVPQGLEYLVADV ARRHGHIRARAVRAAVVADEATINEILATRALRSLDLRRLAPTVAACGADAEDVAERLRAAGMAPVVEDEHGTVVIRRRS GGQPASGRDAAAGAASERGSAGSAGESGTWAAPADVARRILANRAGAGDAARADPRVVRQLGRLNPRLTLAERQLLAAAL NHGEIVTIIYRDRFERRTSRLIAPVELLGGRLDSWCHLREARREFAVARIEGVTPG
Sequences:
>Translated_856_residues MAGRRAAALRKPRGSADSYLDFVQGLDEAALTAVLRARQDVLEDPPRGVGELVRRLGDADSMLAAVNDLDRDGLLLCDAV MMLGPPVPLDRLVILLGGSRDGIRAALRPVTRRALLWESDGVVHAFEPFRRLWDDEVAVWHPAAELIPAISVTDLRRAAR GLVPGARVTSSTTWERSARVVGELMADPDGVVAAVQRLPRPARDLLAELVRDPTGLATGDEPDDALGTGTGAFGTNGFDG GARGRLPAGSNPEEAAGILVESGLLLLVDGEIEVPREVVTVLWAADPEVRLTGPPSLGPAGADRADETFAAGIQAAAGHA LRSVASLLAEAERAPLAALKKGGIGTRERARLARTLALTEDELPLWIDVAHAAGLLAREEGGYAPTGEYPGWRGSDVGRR WAVLALAWFLLDQSPTHREIDSGRDQPPPLPLASGAGRVRRTLLTTASPGRSLAAAGSHLEWFLPLHGYDRPQLANKRRA AVREAELLGVAAGDTVSDLGVAVCEVLAAAPLDPTGQMRAHQYGSPTPTLAGFVTGTLGPLVDELARRCGPALPRDASTM ILQSDLTATVAGQPNHAIARLLADAAVSESRGAAGTWRFTSASIRGALDVGWSAQELLDELRAGAAHEVPQGLEYLVADV ARRHGHIRARAVRAAVVADEATINEILATRALRSLDLRRLAPTVAACGADAEDVAERLRAAGMAPVVEDEHGTVVIRRRS GGQPASGRDAAAGAASERGSAGSAGESGTWAAPADVARRILANRAGAGDAARADPRVVRQLGRLNPRLTLAERQLLAAAL NHGEIVTIIYRDRFERRTSRLIAPVELLGGRLDSWCHLREARREFAVARIEGVTPG >Mature_855_residues AGRRAAALRKPRGSADSYLDFVQGLDEAALTAVLRARQDVLEDPPRGVGELVRRLGDADSMLAAVNDLDRDGLLLCDAVM MLGPPVPLDRLVILLGGSRDGIRAALRPVTRRALLWESDGVVHAFEPFRRLWDDEVAVWHPAAELIPAISVTDLRRAARG LVPGARVTSSTTWERSARVVGELMADPDGVVAAVQRLPRPARDLLAELVRDPTGLATGDEPDDALGTGTGAFGTNGFDGG ARGRLPAGSNPEEAAGILVESGLLLLVDGEIEVPREVVTVLWAADPEVRLTGPPSLGPAGADRADETFAAGIQAAAGHAL RSVASLLAEAERAPLAALKKGGIGTRERARLARTLALTEDELPLWIDVAHAAGLLAREEGGYAPTGEYPGWRGSDVGRRW AVLALAWFLLDQSPTHREIDSGRDQPPPLPLASGAGRVRRTLLTTASPGRSLAAAGSHLEWFLPLHGYDRPQLANKRRAA VREAELLGVAAGDTVSDLGVAVCEVLAAAPLDPTGQMRAHQYGSPTPTLAGFVTGTLGPLVDELARRCGPALPRDASTMI LQSDLTATVAGQPNHAIARLLADAAVSESRGAAGTWRFTSASIRGALDVGWSAQELLDELRAGAAHEVPQGLEYLVADVA RRHGHIRARAVRAAVVADEATINEILATRALRSLDLRRLAPTVAACGADAEDVAERLRAAGMAPVVEDEHGTVVIRRRSG GQPASGRDAAAGAASERGSAGSAGESGTWAAPADVARRILANRAGAGDAARADPRVVRQLGRLNPRLTLAERQLLAAALN HGEIVTIIYRDRFERRTSRLIAPVELLGGRLDSWCHLREARREFAVARIEGVTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90261; Mature: 90130
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRRAAALRKPRGSADSYLDFVQGLDEAALTAVLRARQDVLEDPPRGVGELVRRLGDAD CCCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH SMLAAVNDLDRDGLLLCDAVMMLGPPVPLDRLVILLGGSRDGIRAALRPVTRRALLWESD HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHEECCC GVVHAFEPFRRLWDDEVAVWHPAAELIPAISVTDLRRAARGLVPGARVTSSTTWERSARV CCEEHHHHHHHHCCCCCEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VGELMADPDGVVAAVQRLPRPARDLLAELVRDPTGLATGDEPDDALGTGTGAFGTNGFDG HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC GARGRLPAGSNPEEAAGILVESGLLLLVDGEIEVPREVVTVLWAADPEVRLTGPPSLGPA CCCCCCCCCCCHHHHHHEEEECCEEEEECCCCCCCHHHHHHHCCCCCCEEECCCCCCCCC GADRADETFAAGIQAAAGHALRSVASLLAEAERAPLAALKKGGIGTRERARLARTLALTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCC DELPLWIDVAHAAGLLAREEGGYAPTGEYPGWRGSDVGRRWAVLALAWFLLDQSPTHREI CCCCEEEEHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH DSGRDQPPPLPLASGAGRVRRTLLTTASPGRSLAAAGSHLEWFLPLHGYDRPQLANKRRA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHH AVREAELLGVAAGDTVSDLGVAVCEVLAAAPLDPTGQMRAHQYGSPTPTLAGFVTGTLGP HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH LVDELARRCGPALPRDASTMILQSDLTATVAGQPNHAIARLLADAAVSESRGAAGTWRFT HHHHHHHHHCCCCCCCCHHEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEE SASIRGALDVGWSAQELLDELRAGAAHEVPQGLEYLVADVARRHGHIRARAVRAAVVADE CHHHCCHHCCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATINEILATRALRSLDLRRLAPTVAACGADAEDVAERLRAAGMAPVVEDEHGTVVIRRRS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCEEEEEECC GGQPASGRDAAAGAASERGSAGSAGESGTWAAPADVARRILANRAGAGDAARADPRVVRQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH LGRLNPRLTLAERQLLAAALNHGEIVTIIYRDRFERRTSRLIAPVELLGGRLDSWCHLRE HHCCCCCEEHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH ARREFAVARIEGVTPG HHHHHHHHHCCCCCCC >Mature Secondary Structure AGRRAAALRKPRGSADSYLDFVQGLDEAALTAVLRARQDVLEDPPRGVGELVRRLGDAD CCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH SMLAAVNDLDRDGLLLCDAVMMLGPPVPLDRLVILLGGSRDGIRAALRPVTRRALLWESD HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHEECCC GVVHAFEPFRRLWDDEVAVWHPAAELIPAISVTDLRRAARGLVPGARVTSSTTWERSARV CCEEHHHHHHHHCCCCCEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VGELMADPDGVVAAVQRLPRPARDLLAELVRDPTGLATGDEPDDALGTGTGAFGTNGFDG HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC GARGRLPAGSNPEEAAGILVESGLLLLVDGEIEVPREVVTVLWAADPEVRLTGPPSLGPA CCCCCCCCCCCHHHHHHEEEECCEEEEECCCCCCCHHHHHHHCCCCCCEEECCCCCCCCC GADRADETFAAGIQAAAGHALRSVASLLAEAERAPLAALKKGGIGTRERARLARTLALTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCC DELPLWIDVAHAAGLLAREEGGYAPTGEYPGWRGSDVGRRWAVLALAWFLLDQSPTHREI CCCCEEEEHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH DSGRDQPPPLPLASGAGRVRRTLLTTASPGRSLAAAGSHLEWFLPLHGYDRPQLANKRRA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHH AVREAELLGVAAGDTVSDLGVAVCEVLAAAPLDPTGQMRAHQYGSPTPTLAGFVTGTLGP HHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH LVDELARRCGPALPRDASTMILQSDLTATVAGQPNHAIARLLADAAVSESRGAAGTWRFT HHHHHHHHHCCCCCCCCHHEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEE SASIRGALDVGWSAQELLDELRAGAAHEVPQGLEYLVADVARRHGHIRARAVRAAVVADE CHHHCCHHCCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATINEILATRALRSLDLRRLAPTVAACGADAEDVAERLRAAGMAPVVEDEHGTVVIRRRS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCEEEEEECC GGQPASGRDAAAGAASERGSAGSAGESGTWAAPADVARRILANRAGAGDAARADPRVVRQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH LGRLNPRLTLAERQLLAAALNHGEIVTIIYRDRFERRTSRLIAPVELLGGRLDSWCHLRE HHCCCCCEEHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH ARREFAVARIEGVTPG HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA