| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hisH [H]
Identifier: 158313754
GI number: 158313754
Start: 2300392
End: 2301006
Strand: Direct
Name: hisH [H]
Synonym: Franean1_1919
Alternate gene names: 158313754
Gene position: 2300392-2301006 (Clockwise)
Preceding gene: 158313753
Following gene: 158313758
Centisome position: 25.61
GC content: 73.66
Gene sequence:
>615_bases TTGAGCGGCCCGCGGCCGGACGTCGTCGTCCTCGACTACGGCTCGGGGAACCTGCGTTCGGCCGAGCGGGCGCTCGCCCG GGTCGGTGCCGAGGTGACGGTGACGGCGGATCTCGACGCCGCCCGGGCCGCCGACGGGCTCGTCGTCCCCGGGGTCGGCG CCTTCGCGGCGTGCATGGCGGGTGTGGATGCGGTCGGCGGCGGCGAGGTCGTGCGTGAGCGGCTGGCTGCCGGCCGACCG GTCCTCGGGATCTGCGTGGGCATGCAGATCCTCTACCAGCTCGGCGACGAGCATGGTGTACGGACGGAGGGCCTCGGCGT GCTCGAGGGGAGTGTGCGCCGGCTGACGGCGCCGGTCCTGCCGCACATGGGCTGGAACGTCGTCACGCCCCCACCGGAGT CGGTCCTGTTCGAGGGCGTCGACGCGGAGACGCGTTTCTACTTCGTGCACTCTTACGCGGCGGCGGCGCGGGCGGGTGAC ACCGTCGCCGAACACGGCGAGGCGTTCGCCGCCGCGGTCGAGCGTGGACCGCTCGCGGCCACCCAGTTCCATCCGGAGAA GTCCGGCGACGCCGGTGCCCACGTCCTGCGGAACTGGCTGCGCACCCTGAGCTGA
Upstream 100 bases:
>100_bases ACGTCGTCGAGGCGCAGTTCAAGTCGGTGGCCCGGGCCATGCGCGACGCTGTGGCGCTCGACGCGCGGGTCGCCGGCGTG CCGTCCACCAAGGGCGTGCT
Downstream 100 bases:
>100_bases CCACCTGCAGCGGCCAGCCGCCGAGCCGCCGCAGCCGCCGCCGCCACAGGCGCAGGCGTCGGCTCCGGCCCTGTTGATCA GGGGGCGTCGGGGGCGAGTC
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSGPRPDVVVLDYGSGNLRSAERALARVGAEVTVTADLDAARAADGLVVPGVGAFAACMAGVDAVGGGEVVRERLAAGRP VLGICVGMQILYQLGDEHGVRTEGLGVLEGSVRRLTAPVLPHMGWNVVTPPPESVLFEGVDAETRFYFVHSYAAAARAGD TVAEHGEAFAAAVERGPLAATQFHPEKSGDAGAHVLRNWLRTLS
Sequences:
>Translated_204_residues MSGPRPDVVVLDYGSGNLRSAERALARVGAEVTVTADLDAARAADGLVVPGVGAFAACMAGVDAVGGGEVVRERLAAGRP VLGICVGMQILYQLGDEHGVRTEGLGVLEGSVRRLTAPVLPHMGWNVVTPPPESVLFEGVDAETRFYFVHSYAAAARAGD TVAEHGEAFAAAVERGPLAATQFHPEKSGDAGAHVLRNWLRTLS >Mature_203_residues SGPRPDVVVLDYGSGNLRSAERALARVGAEVTVTADLDAARAADGLVVPGVGAFAACMAGVDAVGGGEVVRERLAAGRPV LGICVGMQILYQLGDEHGVRTEGLGVLEGSVRRLTAPVLPHMGWNVVTPPPESVLFEGVDAETRFYFVHSYAAAARAGDT VAEHGEAFAAAVERGPLAATQFHPEKSGDAGAHVLRNWLRTLS
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=199, Percent_Identity=43.7185929648241, Blast_Score=139, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6319725, Length=216, Percent_Identity=34.7222222222222, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 21165; Mature: 21034
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPRPDVVVLDYGSGNLRSAERALARVGAEVTVTADLDAARAADGLVVPGVGAFAACMA CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCCCEEECCHHHHHHHHH GVDAVGGGEVVRERLAAGRPVLGICVGMQILYQLGDEHGVRTEGLGVLEGSVRRLTAPVL CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH PHMGWNVVTPPPESVLFEGVDAETRFYFVHSYAAAARAGDTVAEHGEAFAAAVERGPLAA CCCCCCCCCCCCHHHEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE TQFHPEKSGDAGAHVLRNWLRTLS EECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SGPRPDVVVLDYGSGNLRSAERALARVGAEVTVTADLDAARAADGLVVPGVGAFAACMA CCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCCCEEECCHHHHHHHHH GVDAVGGGEVVRERLAAGRPVLGICVGMQILYQLGDEHGVRTEGLGVLEGSVRRLTAPVL CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH PHMGWNVVTPPPESVLFEGVDAETRFYFVHSYAAAARAGDTVAEHGEAFAAAVERGPLAA CCCCCCCCCCCCHHHEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE TQFHPEKSGDAGAHVLRNWLRTLS EECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA