Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313534

Identifier: 158313534

GI number: 158313534

Start: 2030861

End: 2031523

Strand: Direct

Name: 158313534

Synonym: Franean1_1698

Alternate gene names: NA

Gene position: 2030861-2031523 (Clockwise)

Preceding gene: 158313533

Following gene: 158313535

Centisome position: 22.61

GC content: 76.32

Gene sequence:

>663_bases
GTGGTGGTCGCCGCCACCGTGGCGGCCGCGGTCTGCGCCGCGCTGCCGATCCCGCTGCTGCCCCGGGTCGTCGACTCCTT
CGATCCAGTGGACGGCCGTTTGCCGCGCCGGGCGACCCCCGCGCCGGCCGTGCTCGGCGCCGTCACCGCCGTCCTGATCG
CCGCCGTCGCCGCGTCGACCTACCCGCACCCGGGACGTCTGCCCGCGTACCTGTACCTGACGGTCGTCGGGGTCGTGCTT
GCCGCCGTGGACCTGCGGGTGCACCGCCTGCCGGACGTGATCGTGCTGCCCTCGTACGCCGTGCTGGCCGCGCTGCTCGC
CGTGCCCGCGTTGGCCGAGGGCGCGCCCAACCGCTGGCCGCGGGCGCTGCTCGCCGGCGCCGTGGCCTGGCTGTTGTACG
CGGGCCTGCGCCTGCTGCCGGGGGCCGGGCTGGGGCGGGGGGACGTGAAGCTCGCCGGGCTGCTCGGCGTGGCGACGGGC
TGGCTGGGCTGGTCGGCCGTCGTGGTGTGGCTGGTCGCGACGACCATGATCTCCGGTGCGGTGGTCCTCGTGCTGCTGGC
GCTGCGCCGTGTGTCCCGCCGTGATCCGATCGCCTACGGCCCGTTTCTGCTGTTCGGGGCGCTGATCGCGGTGCTCGGCG
TGGGCTGGGAGCCGGCCGGCTGA

Upstream 100 bases:

>100_bases
GCCACGCGGCGCTGTCGGCCCGCGTCGCGAGCCGGATCGGATGAGCCCGGCGGTCGGATGAGCACGATGGTCAGGTGAAC
AGGGTGGTCAGGTGAACACG

Downstream 100 bases:

>100_bases
GCGATCTCCGGCCCGCGACGGGGGCTCGTACCGGACCGGCCGTGAAAGACTGGCAGGCATGGTGCGTTGGTTGACAGCGG
GGGAGTCACACGGCCCCGCA

Product: peptidase A24A prepilin type IV

Products: NA

Alternate protein names: Integral Membrane Peptidase

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MVVAATVAAAVCAALPIPLLPRVVDSFDPVDGRLPRRATPAPAVLGAVTAVLIAAVAASTYPHPGRLPAYLYLTVVGVVL
AAVDLRVHRLPDVIVLPSYAVLAALLAVPALAEGAPNRWPRALLAGAVAWLLYAGLRLLPGAGLGRGDVKLAGLLGVATG
WLGWSAVVVWLVATTMISGAVVLVLLALRRVSRRDPIAYGPFLLFGALIAVLGVGWEPAG

Sequences:

>Translated_220_residues
MVVAATVAAAVCAALPIPLLPRVVDSFDPVDGRLPRRATPAPAVLGAVTAVLIAAVAASTYPHPGRLPAYLYLTVVGVVL
AAVDLRVHRLPDVIVLPSYAVLAALLAVPALAEGAPNRWPRALLAGAVAWLLYAGLRLLPGAGLGRGDVKLAGLLGVATG
WLGWSAVVVWLVATTMISGAVVLVLLALRRVSRRDPIAYGPFLLFGALIAVLGVGWEPAG
>Mature_220_residues
MVVAATVAAAVCAALPIPLLPRVVDSFDPVDGRLPRRATPAPAVLGAVTAVLIAAVAASTYPHPGRLPAYLYLTVVGVVL
AAVDLRVHRLPDVIVLPSYAVLAALLAVPALAEGAPNRWPRALLAGAVAWLLYAGLRLLPGAGLGRGDVKLAGLLGVATG
WLGWSAVVVWLVATTMISGAVVLVLLALRRVSRRDPIAYGPFLLFGALIAVLGVGWEPAG

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43; 2.1.1.-

Molecular weight: Translated: 22554; Mature: 22554

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAATVAAAVCAALPIPLLPRVVDSFDPVDGRLPRRATPAPAVLGAVTAVLIAAVAAST
CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
YPHPGRLPAYLYLTVVGVVLAAVDLRVHRLPDVIVLPSYAVLAALLAVPALAEGAPNRWP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCCCCHH
RALLAGAVAWLLYAGLRLLPGAGLGRGDVKLAGLLGVATGWLGWSAVVVWLVATTMISGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVLLALRRVSRRDPIAYGPFLLFGALIAVLGVGWEPAG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVVAATVAAAVCAALPIPLLPRVVDSFDPVDGRLPRRATPAPAVLGAVTAVLIAAVAAST
CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
YPHPGRLPAYLYLTVVGVVLAAVDLRVHRLPDVIVLPSYAVLAALLAVPALAEGAPNRWP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCCCCHH
RALLAGAVAWLLYAGLRLLPGAGLGRGDVKLAGLLGVATGWLGWSAVVVWLVATTMISGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVLLALRRVSRRDPIAYGPFLLFGALIAVLGVGWEPAG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA