| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313343
Identifier: 158313343
GI number: 158313343
Start: 1808085
End: 1808657
Strand: Direct
Name: 158313343
Synonym: Franean1_1505
Alternate gene names: NA
Gene position: 1808085-1808657 (Clockwise)
Preceding gene: 158313342
Following gene: 158313345
Centisome position: 20.13
GC content: 69.28
Gene sequence:
>573_bases ATGCGTCTCGGTATCGCTCATCACTTCGGCTGGGCTGTGGCCGTCACGGCTGAGTCGGACCACAAGGTCGTGGACCGCCG GAGGATCGAGTTGATCGAGCCCGGCCTGCCGACGGCGCCGATCCACCACGAGGGCGGCCCGCACCTGCTCCACCGGTCGG CGGACCCGCTGGACGACGATGCCCTCGCGGTGCTGGTGGCGGACGTTCGGGCCTCGGTGGTCCGGGCAACCTCGGTCGCA CTGGACGAGCTCGCGGCCGGGTTGTCCGAGCCGATCGTCTCGATGTCGCTGCGGGCCTGGCCGGCCGACTTCCCGCGAGA CATCGCCACTCAACGTCGTGTGCCGTACGAGAGCCGCGCCGACTCGGTGATGTACTGCCAGGTGCTGGCCGAACTCGCTC GCGACCGTGGTTGGGCGGTCCACCTTTATACCGCCAAGGACGTCGAGGCCGAAGCGGTCCGCATCCTGGGTGAGCGAGCG AAGGAGGTCCTTCACGGCTCGCGGGCTGTGTGGGGAGCACCGTGGTCCAAGGACCATCGGGCGGCACTCGCGGCAACGAT CGTGGCCACCTGA
Upstream 100 bases:
>100_bases CTGCTCGACGCCGGGCGCCCTTGCTGGCGGTCGGTTCGGGGGCGCGCCGCCCGGTCGGCCTCGTTGTCGAGAAGCTGGAG GGTCAGTCACAATCCGTGGA
Downstream 100 bases:
>100_bases CTTCGTTCCCGGCGGCAGTTCAGTGTGCCGGCCGTCACTACCGCTTTGTCTTGCCGGCTGCGTTTTCCTTTGGCGGGGCC GGAGTCACCGGGGCCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRLGIAHHFGWAVAVTAESDHKVVDRRRIELIEPGLPTAPIHHEGGPHLLHRSADPLDDDALAVLVADVRASVVRATSVA LDELAAGLSEPIVSMSLRAWPADFPRDIATQRRVPYESRADSVMYCQVLAELARDRGWAVHLYTAKDVEAEAVRILGERA KEVLHGSRAVWGAPWSKDHRAALAATIVAT
Sequences:
>Translated_190_residues MRLGIAHHFGWAVAVTAESDHKVVDRRRIELIEPGLPTAPIHHEGGPHLLHRSADPLDDDALAVLVADVRASVVRATSVA LDELAAGLSEPIVSMSLRAWPADFPRDIATQRRVPYESRADSVMYCQVLAELARDRGWAVHLYTAKDVEAEAVRILGERA KEVLHGSRAVWGAPWSKDHRAALAATIVAT >Mature_190_residues MRLGIAHHFGWAVAVTAESDHKVVDRRRIELIEPGLPTAPIHHEGGPHLLHRSADPLDDDALAVLVADVRASVVRATSVA LDELAAGLSEPIVSMSLRAWPADFPRDIATQRRVPYESRADSVMYCQVLAELARDRGWAVHLYTAKDVEAEAVRILGERA KEVLHGSRAVWGAPWSKDHRAALAATIVAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20749; Mature: 20749
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGIAHHFGWAVAVTAESDHKVVDRRRIELIEPGLPTAPIHHEGGPHLLHRSADPLDDD CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCH ALAVLVADVRASVVRATSVALDELAAGLSEPIVSMSLRAWPADFPRDIATQRRVPYESRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC DSVMYCQVLAELARDRGWAVHLYTAKDVEAEAVRILGERAKEVLHGSRAVWGAPWSKDHR CHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH AALAATIVAT HHHHEEEECC >Mature Secondary Structure MRLGIAHHFGWAVAVTAESDHKVVDRRRIELIEPGLPTAPIHHEGGPHLLHRSADPLDDD CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCH ALAVLVADVRASVVRATSVALDELAAGLSEPIVSMSLRAWPADFPRDIATQRRVPYESRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC DSVMYCQVLAELARDRGWAVHLYTAKDVEAEAVRILGERAKEVLHGSRAVWGAPWSKDHR CHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH AALAATIVAT HHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA