| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313342
Identifier: 158313342
GI number: 158313342
Start: 1807440
End: 1807823
Strand: Direct
Name: 158313342
Synonym: Franean1_1504
Alternate gene names: NA
Gene position: 1807440-1807823 (Clockwise)
Preceding gene: 158313341
Following gene: 158313343
Centisome position: 20.12
GC content: 60.68
Gene sequence:
>384_bases ATGGATTACCCACTTCTGTCGGCCTTCTGGACGATGCTGCTGTTCTTCGGGTTTCTCCTCTGGCTGTACGTGCTCTTCAT CGTTGTATCGGATGTCTTTCGCAGTCGCGACCTCTCTGGCTGGGGGAAGGCCGGTTGGTTGACGGCCGTCATCATCCTTC CGCTTCTGGGTGTTCTGGCGTACACCATATTCCGTGGCGACTCGATGGGTGAGCGGGCGTTTGAGGACGCACGACGGCAG CAAGCCTTGCACGAGGCATTTCGGCCGTCCGCGGTGCAGTCTCAGGGGGTCGCCGACGAAATGGCGAAGCTGGTCGCTCT CCGGAGGAATGGCGAGATCAGCGAGGAGGATTTCCAGCAGGCGAAGTCCCGGGTCCTGGCCTGA
Upstream 100 bases:
>100_bases GCAGGCCGACGAGCAAACCGTGTGGTTGCGCGAGGTTCAGGTAGGTCTCCAACGAGACGTCGTTGACAAATTGCTGTTGA CGTACGTAAGGGGGCTCCTC
Downstream 100 bases:
>100_bases GTTTCTCAAATGACGCCGAGCGCGCGTCCGGCGGCGACGGAATCCTGGCGGGAGGCTACGCTCGCGGACTCGTCGGCGTC GAGATTCCCGTGGATGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA
Sequences:
>Translated_127_residues MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA >Mature_127_residues MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14406; Mature: 14406
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH YTIFRGDSMGERAFEDARRQQALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH AKSRVLA HHHHCCC >Mature Secondary Structure MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH YTIFRGDSMGERAFEDARRQQALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH AKSRVLA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA