| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is bmr3 [H]
Identifier: 158313345
GI number: 158313345
Start: 1809518
End: 1810891
Strand: Direct
Name: bmr3 [H]
Synonym: Franean1_1507
Alternate gene names: 158313345
Gene position: 1809518-1810891 (Clockwise)
Preceding gene: 158313343
Following gene: 158313346
Centisome position: 20.15
GC content: 72.71
Gene sequence:
>1374_bases GTGTCCCACCCCCTTGCCGGACCCGCCGATCTTGCCAGTGACGCCGATCCTGCCAGTGACGCCGACGCCGACGCCGACGC CGACGCCGACGCCGTCACGGCACCGCGGGCGGGTGCCGTCGTGGCGGTTCTGGCGTTCGCCGGGATCGTGGTCGCGTCGA TGCAGAGCCTGGTGATCCCGCTGCTCCCCGAGCTGCCCGGGCTGGTGCACGCGTCGGCGTCCGGGACGGCTTGGGCGATC ACCGCGACGCTGCTCGCCTCCGCCATCGCCACTCCGGTGGCGGGCCGGCTCGGGGACATGTACGGCAAGCGGCGCATGCT GCTGGCCAGCCTCGGCCTGTTGGTGGTCGGCTCGGCCGCCGCCGGCCTGTCCACCACCCTGACCCCCCTGGTCATCGGGC GGACACTGCAGGGTCTGTCAGCCGGTGTCATCCCGCTGGGGATCAGCATCATGCGCGACGAGCTGCCGCCCGAGCGCCTC GGTTCGGCGACCGCGACGATGAGCTCCTCGCTCGGTGTTGGCGGCGCCCTGGGCCTGCCCGCGGCGGCCCTGATCGCCGA CCACACCGACTGGCACCTGCTGTTCTGGATCTCGGCGGGGCTGGGCGTCGTCGCCACGGCACTCGTGCTGCGGCTGGTGC CGGAATCCCGAGCCCGCACCGGCGGGCGCGTCGACCTGGTCGGTGCGGCAGGGTTGTCGGCCGTGCTCGTGTGCCTGCTG CTGGCGATCTCCCAGGGGGCCGACTGGGGCTGGGCCAGCGGCCGCACCCTCGGCCTGTTCGTCGCAGGCGTCGCGGTCCT GCTGGCGTGGGGGCGCTGGGAGCTGCGCGCGCGGCAGCCGCTGGTGGACCTGCGCACCAGCGCGCGACGTCAGGTGCTGG TCACCAACCTCGCCTCGGTCATGTTCGGTGTCGCCACGATGCCGGTCCGGCTGGTGCAGCCCCAGATACTGCAGCTGCCC GCCGCCACCGGCTACGGGCTGGGGAAGTCGCTTCTGGTCACCGGCCTGGTCCTGACCCCCACGGGCCTGGTGATGATGGC CGTCTCACCGCTGTCCGCGCGTATCTCCGCCGCCAGGGGACCGAAGACGACCCTGATGGCCGGAGCCGTCGTGATCGCCG CCGGCTATGCGCTGGGCATCGGGCTGATGTCCGCCATCTGGCAGCTCATGATGGTCACCAGCGTCATCGGCGCCGGGATC GGGCTCGCCTACGGCGCCATGCCGGCGCTCATCATGGCGGCGGTTCCGATCTCCGAGACCGGCGCCGCCAACAGCCTCAA CAGCCTCATGCGGACCATCGGCGCGGCTCTGCTCGCCCTGGCCATCGCCACGCTCGTACCCCGCCGTCGCCCGCTTGTGC ATGCCGACGCATGA
Upstream 100 bases:
>100_bases GATTTGTCGCTTCTGTCTGCAAATTTAGTCATCTGATTTAATCCGGTAAATCGCATGAATTAACTGATCTTGCGCTGCTC TCCCGGTCGGAGGCTCGTCT
Downstream 100 bases:
>100_bases CGATCCAACATTCCTGATCTTTACCTAAAGAACCCTATAGTGAGGCGTGTTAAGCTGCGTTTGTGGAACGTCTCTACTCG GTTGATCAAGTTGCCGACCT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Multidrug-efflux transporter 3 [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSHPLAGPADLASDADPASDADADADADADAVTAPRAGAVVAVLAFAGIVVASMQSLVIPLLPELPGLVHASASGTAWAI TATLLASAIATPVAGRLGDMYGKRRMLLASLGLLVVGSAAAGLSTTLTPLVIGRTLQGLSAGVIPLGISIMRDELPPERL GSATATMSSSLGVGGALGLPAAALIADHTDWHLLFWISAGLGVVATALVLRLVPESRARTGGRVDLVGAAGLSAVLVCLL LAISQGADWGWASGRTLGLFVAGVAVLLAWGRWELRARQPLVDLRTSARRQVLVTNLASVMFGVATMPVRLVQPQILQLP AATGYGLGKSLLVTGLVLTPTGLVMMAVSPLSARISAARGPKTTLMAGAVVIAAGYALGIGLMSAIWQLMMVTSVIGAGI GLAYGAMPALIMAAVPISETGAANSLNSLMRTIGAALLALAIATLVPRRRPLVHADA
Sequences:
>Translated_457_residues MSHPLAGPADLASDADPASDADADADADADAVTAPRAGAVVAVLAFAGIVVASMQSLVIPLLPELPGLVHASASGTAWAI TATLLASAIATPVAGRLGDMYGKRRMLLASLGLLVVGSAAAGLSTTLTPLVIGRTLQGLSAGVIPLGISIMRDELPPERL GSATATMSSSLGVGGALGLPAAALIADHTDWHLLFWISAGLGVVATALVLRLVPESRARTGGRVDLVGAAGLSAVLVCLL LAISQGADWGWASGRTLGLFVAGVAVLLAWGRWELRARQPLVDLRTSARRQVLVTNLASVMFGVATMPVRLVQPQILQLP AATGYGLGKSLLVTGLVLTPTGLVMMAVSPLSARISAARGPKTTLMAGAVVIAAGYALGIGLMSAIWQLMMVTSVIGAGI GLAYGAMPALIMAAVPISETGAANSLNSLMRTIGAALLALAIATLVPRRRPLVHADA >Mature_456_residues SHPLAGPADLASDADPASDADADADADADAVTAPRAGAVVAVLAFAGIVVASMQSLVIPLLPELPGLVHASASGTAWAIT ATLLASAIATPVAGRLGDMYGKRRMLLASLGLLVVGSAAAGLSTTLTPLVIGRTLQGLSAGVIPLGISIMRDELPPERLG SATATMSSSLGVGGALGLPAAALIADHTDWHLLFWISAGLGVVATALVLRLVPESRARTGGRVDLVGAAGLSAVLVCLLL AISQGADWGWASGRTLGLFVAGVAVLLAWGRWELRARQPLVDLRTSARRQVLVTNLASVMFGVATMPVRLVQPQILQLPA ATGYGLGKSLLVTGLVLTPTGLVMMAVSPLSARISAARGPKTTLMAGAVVIAAGYALGIGLMSAIWQLMMVTSVIGAGIG LAYGAMPALIMAAVPISETGAANSLNSLMRTIGAALLALAIATLVPRRRPLVHADA
Specific function: Confers resistance to puromycin, tosufloxacin and norfloxacin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1788710, Length=404, Percent_Identity=25.4950495049505, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789042, Length=408, Percent_Identity=24.2647058823529, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87081983, Length=437, Percent_Identity=27.2311212814645, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790195, Length=373, Percent_Identity=24.9329758713137, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46012; Mature: 45881
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPLAGPADLASDADPASDADADADADADAVTAPRAGAVVAVLAFAGIVVASMQSLVIP CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLPELPGLVHASASGTAWAITATLLASAIATPVAGRLGDMYGKRRMLLASLGLLVVGSAA HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AGLSTTLTPLVIGRTLQGLSAGVIPLGISIMRDELPPERLGSATATMSSSLGVGGALGLP CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCHHHCC AAALIADHTDWHLLFWISAGLGVVATALVLRLVPESRARTGGRVDLVGAAGLSAVLVCLL HHHHHHCCCCCEEEHHHHCCHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH LAISQGADWGWASGRTLGLFVAGVAVLLAWGRWELRARQPLVDLRTSARRQVLVTNLASV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH MFGVATMPVRLVQPQILQLPAATGYGLGKSLLVTGLVLTPTGLVMMAVSPLSARISAARG HHHHHHCCHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCC PKTTLMAGAVVIAAGYALGIGLMSAIWQLMMVTSVIGAGIGLAYGAMPALIMAAVPISET CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAANSLNSLMRTIGAALLALAIATLVPRRRPLVHADA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SHPLAGPADLASDADPASDADADADADADAVTAPRAGAVVAVLAFAGIVVASMQSLVIP CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLPELPGLVHASASGTAWAITATLLASAIATPVAGRLGDMYGKRRMLLASLGLLVVGSAA HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AGLSTTLTPLVIGRTLQGLSAGVIPLGISIMRDELPPERLGSATATMSSSLGVGGALGLP CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCHHHCC AAALIADHTDWHLLFWISAGLGVVATALVLRLVPESRARTGGRVDLVGAAGLSAVLVCLL HHHHHHCCCCCEEEHHHHCCHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH LAISQGADWGWASGRTLGLFVAGVAVLLAWGRWELRARQPLVDLRTSARRQVLVTNLASV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH MFGVATMPVRLVQPQILQLPAATGYGLGKSLLVTGLVLTPTGLVMMAVSPLSARISAARG HHHHHHCCHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCC PKTTLMAGAVVIAAGYALGIGLMSAIWQLMMVTSVIGAGIGLAYGAMPALIMAAVPISET CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAANSLNSLMRTIGAALLALAIATLVPRRRPLVHADA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9023234; 9384377 [H]