| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313265
Identifier: 158313265
GI number: 158313265
Start: 1719727
End: 1720149
Strand: Direct
Name: 158313265
Synonym: Franean1_1425
Alternate gene names: NA
Gene position: 1719727-1720149 (Clockwise)
Preceding gene: 158313262
Following gene: 158313271
Centisome position: 19.15
GC content: 66.19
Gene sequence:
>423_bases ATGGCCCGTTTGTCCGAGCAACTGGCCTACCTCTCGAGGCGTGCCAAGGCAGCTGAGGATGCTGCGGATGTTGCCGAGAC CGAGACTCGTGAGGAGCTGGCGGCCAAAGTCGAGCAGGCTCGTGCCAACGCCGAGCAGCATGCGAGCGAGCTTCGTGAGA AGGCCACGGACGTGACCCAGGAGGCTTCCAGTCGATGGAGCGAGATCCAGGAGCGCTGGAAGGACCACGTGAGCAAGGTG CGTGCTGAGGTCCAACAGAAGCAGACCGAGCGCGACGCCCAGCGTGCCGAGCGGCGCGCGGAGTACGCGGAGGACGACGC CGTCTGCGCGATCTCTTTCGCTATCGCCGCTGTGGAAGAAGCCGAGTACGCCGTCCTGGACGCCACCTTGGCTCGCGCCG ACGCTGCGGCCGTCAGCACCTGA
Upstream 100 bases:
>100_bases TGATGGTCGCCGTCGTTGGGGTGGACCTGCGCCAGCCAGGAATCCGCGCTAGCGTGACTGTCATGTGATTGTGCAGGAAG ACGACGGAAGGGTGAGAATT
Downstream 100 bases:
>100_bases TCCCCATCTCATTGCCCCGGGTTCGGTTGGTGACGCCCTGCTCGGCTTTTGCGCGCGGGCGTGGCTCGGCCTGTACGACC TGGCAGACATCCCGCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MARLSEQLAYLSRRAKAAEDAADVAETETREELAAKVEQARANAEQHASELREKATDVTQEASSRWSEIQERWKDHVSKV RAEVQQKQTERDAQRAERRAEYAEDDAVCAISFAIAAVEEAEYAVLDATLARADAAAVST
Sequences:
>Translated_140_residues MARLSEQLAYLSRRAKAAEDAADVAETETREELAAKVEQARANAEQHASELREKATDVTQEASSRWSEIQERWKDHVSKV RAEVQQKQTERDAQRAERRAEYAEDDAVCAISFAIAAVEEAEYAVLDATLARADAAAVST >Mature_139_residues ARLSEQLAYLSRRAKAAEDAADVAETETREELAAKVEQARANAEQHASELREKATDVTQEASSRWSEIQERWKDHVSKVR AEVQQKQTERDAQRAERRAEYAEDDAVCAISFAIAAVEEAEYAVLDATLARADAAAVST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15537; Mature: 15406
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLSEQLAYLSRRAKAAEDAADVAETETREELAAKVEQARANAEQHASELREKATDVTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EASSRWSEIQERWKDHVSKVRAEVQQKQTERDAQRAERRAEYAEDDAVCAISFAIAAVEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AEYAVLDATLARADAAAVST HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARLSEQLAYLSRRAKAAEDAADVAETETREELAAKVEQARANAEQHASELREKATDVTQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EASSRWSEIQERWKDHVSKVRAEVQQKQTERDAQRAERRAEYAEDDAVCAISFAIAAVEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AEYAVLDATLARADAAAVST HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA