| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313271
Identifier: 158313271
GI number: 158313271
Start: 1726936
End: 1727238
Strand: Direct
Name: 158313271
Synonym: Franean1_1431
Alternate gene names: NA
Gene position: 1726936-1727238 (Clockwise)
Preceding gene: 158313265
Following gene: 158313274
Centisome position: 19.23
GC content: 66.01
Gene sequence:
>303_bases ATGGTCAGGTTGCCGCTCACTCCGGCAGAGGTCGAGCGCGGGCAACGCCTCGGCGCCCTCCTGCGTCGGGCCAGGGGGGA GCGCTCGATGCTCGATACCGCGCTGGATGCAGGTGTCTCACCAGAAACCCTTCGGAAGATCGAGTCTGGTCGCGTAGCCA CCCCTGCCTTCCCGACCATCGCGGCGATCGCCGATGTCCTCAGCCTTTCCCTCGACGAAGTGTGGGCCGAGATCAACCAG CCTGACGGCGAGGTCGAACCCACAAGATCAGGTCGCAACGCACGCGAGCGGTTGGCCTCGTGA
Upstream 100 bases:
>100_bases GAGCCAGCTTGGCCGGGCTCAGGATCTCGATCATGCGGCGCCCTTCTCATGCTACCAATAACTATACCGGCCATATTATA CCGGTACTATAATCGGAGTC
Downstream 100 bases:
>100_bases GTCTCGAGCCCGGCGAAGCGGTGCCAGTCGTCCGCGATCGGGTCCGTGGCGCCTGACGTGGTCACCGGTATGCGCCGGCG GGGATGGCGAGCGTGCGGGA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MVRLPLTPAEVERGQRLGALLRRARGERSMLDTALDAGVSPETLRKIESGRVATPAFPTIAAIADVLSLSLDEVWAEINQ PDGEVEPTRSGRNARERLAS
Sequences:
>Translated_100_residues MVRLPLTPAEVERGQRLGALLRRARGERSMLDTALDAGVSPETLRKIESGRVATPAFPTIAAIADVLSLSLDEVWAEINQ PDGEVEPTRSGRNARERLAS >Mature_100_residues MVRLPLTPAEVERGQRLGALLRRARGERSMLDTALDAGVSPETLRKIESGRVATPAFPTIAAIADVLSLSLDEVWAEINQ PDGEVEPTRSGRNARERLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10847; Mature: 10847
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLPLTPAEVERGQRLGALLRRARGERSMLDTALDAGVSPETLRKIESGRVATPAFPTI CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH AAIADVLSLSLDEVWAEINQPDGEVEPTRSGRNARERLAS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MVRLPLTPAEVERGQRLGALLRRARGERSMLDTALDAGVSPETLRKIESGRVATPAFPTI CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH AAIADVLSLSLDEVWAEINQPDGEVEPTRSGRNARERLAS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA