| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tfxG [H]
Identifier: 158313262
GI number: 158313262
Start: 1715758
End: 1716522
Strand: Direct
Name: tfxG [H]
Synonym: Franean1_1421
Alternate gene names: 158313262
Gene position: 1715758-1716522 (Clockwise)
Preceding gene: 158313261
Following gene: 158313265
Centisome position: 19.1
GC content: 69.28
Gene sequence:
>765_bases GTGCCCCTGTCAGGCGGTTGGGTGAACACCGTCGTCCGCAGCGGCGACACGGTGCACAGACCCCTGCCGCAGCGCGCCGA CTTCGTGCACGAGCCGCTCGCCTTCCTGGCGCGGCGTGGCTGGGGTGGCGCGCCGCGATTCCTCGGTGTCGACGAGCGTG GCCGGGAGGTCCTCAGCTTCCTGCCCGGACATGTCGCCTGGGAGCCTGAGCAGCCTGCCGCCGTTACGTCCGATGAGAGC CTCGTCGGGGTCGCCGAGCTGGTTCGCGGGTTTCACGATCTGACTGCGGGCACGCCACTGGCCGCTGGGAGCGAGGTTGT CTGTCACAACGACTTGGCGCCGAAGAACACCGTCTACCGCGACCTCGGCGATGGGCTACGCCCTGTCGCCTTCCTCGACT GGGATCTGGCCTCGCCCGGGGAACGGATCCATGACGTCGCGCACGTCTGCTGGCAGTTCCTCGGCCTCGGCCCCGCTGCG ACCGACATGGACGAGGCGGCCCGGAGGATCCGGCTGATCCGTGACGCCTACGGCCTGCACCGGCGTGCGCCACTGATCGA GACGATCCTGTGGTGGCAAGATCGTTGCTGGCGTGGCATTCAGTCAGAAGCGCTGGCGGGCGACCCGGCAGCGGTGCGCC TACGCGACGCTGGCGCCATGGAGGATGTCCGTGCCGCCTACCAGTGGGTGGCCGACAACCACGGCCGGCTCGGCGACCAA AGTGGATCTTCCGGGCAGGCCCATGGCTGGCGTCGCAGATCTTAG
Upstream 100 bases:
>100_bases ACTTTACCCCCATGATTCTTTGGACCGCCTGCCGCGGCCTGCCAGTGCCCGCGTCGTGGACGGCTTCGGCCGCGGACGCA GCCGAGCCGACGTGATGGAT
Downstream 100 bases:
>100_bases CAGCAGCGGGGAGGGGCTCGGAGCCACCCCAGAGCCCGATTCCAGGTGTTCGTCCGGACCCCCGCTAGGCTGCTAGAGCC CAGGTCAGGGGCGGTATTCG
Product: putative trifolitoxin immunity protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MPLSGGWVNTVVRSGDTVHRPLPQRADFVHEPLAFLARRGWGGAPRFLGVDERGREVLSFLPGHVAWEPEQPAAVTSDES LVGVAELVRGFHDLTAGTPLAAGSEVVCHNDLAPKNTVYRDLGDGLRPVAFLDWDLASPGERIHDVAHVCWQFLGLGPAA TDMDEAARRIRLIRDAYGLHRRAPLIETILWWQDRCWRGIQSEALAGDPAAVRLRDAGAMEDVRAAYQWVADNHGRLGDQ SGSSGQAHGWRRRS
Sequences:
>Translated_254_residues MPLSGGWVNTVVRSGDTVHRPLPQRADFVHEPLAFLARRGWGGAPRFLGVDERGREVLSFLPGHVAWEPEQPAAVTSDES LVGVAELVRGFHDLTAGTPLAAGSEVVCHNDLAPKNTVYRDLGDGLRPVAFLDWDLASPGERIHDVAHVCWQFLGLGPAA TDMDEAARRIRLIRDAYGLHRRAPLIETILWWQDRCWRGIQSEALAGDPAAVRLRDAGAMEDVRAAYQWVADNHGRLGDQ SGSSGQAHGWRRRS >Mature_253_residues PLSGGWVNTVVRSGDTVHRPLPQRADFVHEPLAFLARRGWGGAPRFLGVDERGREVLSFLPGHVAWEPEQPAAVTSDESL VGVAELVRGFHDLTAGTPLAAGSEVVCHNDLAPKNTVYRDLGDGLRPVAFLDWDLASPGERIHDVAHVCWQFLGLGPAAT DMDEAARRIRLIRDAYGLHRRAPLIETILWWQDRCWRGIQSEALAGDPAAVRLRDAGAMEDVRAAYQWVADNHGRLGDQS GSSGQAHGWRRRS
Specific function: Required for TFX resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 27926; Mature: 27794
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSGGWVNTVVRSGDTVHRPLPQRADFVHEPLAFLARRGWGGAPRFLGVDERGREVLSF CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LPGHVAWEPEQPAAVTSDESLVGVAELVRGFHDLTAGTPLAAGSEVVCHNDLAPKNTVYR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH DLGDGLRPVAFLDWDLASPGERIHDVAHVCWQFLGLGPAATDMDEAARRIRLIRDAYGLH HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RRAPLIETILWWQDRCWRGIQSEALAGDPAAVRLRDAGAMEDVRAAYQWVADNHGRLGDQ HCCHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCC SGSSGQAHGWRRRS CCCCCCCCCCCCCC >Mature Secondary Structure PLSGGWVNTVVRSGDTVHRPLPQRADFVHEPLAFLARRGWGGAPRFLGVDERGREVLSF CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LPGHVAWEPEQPAAVTSDESLVGVAELVRGFHDLTAGTPLAAGSEVVCHNDLAPKNTVYR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH DLGDGLRPVAFLDWDLASPGERIHDVAHVCWQFLGLGPAATDMDEAARRIRLIRDAYGLH HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RRAPLIETILWWQDRCWRGIQSEALAGDPAAVRLRDAGAMEDVRAAYQWVADNHGRLGDQ HCCHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCC SGSSGQAHGWRRRS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8509324 [H]