| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is thrC [H]
Identifier: 158312860
GI number: 158312860
Start: 1186838
End: 1187962
Strand: Direct
Name: thrC [H]
Synonym: Franean1_1006
Alternate gene names: 158312860
Gene position: 1186838-1187962 (Clockwise)
Preceding gene: 158312859
Following gene: 158312861
Centisome position: 13.21
GC content: 73.16
Gene sequence:
>1125_bases ATGACCACGATGTCGTCGATGCCGGTTTCGAGCGACCCGGCCGGCAGCAGTGCCCCCGAGCGCGCGTCGCGGGCCTGGCG GGGGATCATCGAGGAGTACCGGGACCGGCTGCCCGTCACCGCCGACACACCGGTGATCACCCTGCGGGAGGGCGGCACCC CGCTGCTGCACGCGGACCATCTGTCCGAGCTGACCGGATGTGATGTTCATCTCAAGGTCGAAGGTGCCAACCCCACCGGC TCGTTCAAGGACCGCGGCATGACGGTCGCGATCAGCCGGGCGGTGGGAGAGGGCTCCCAGGCCGTCATCTGCGCGTCCAC CGGCAATACCTCGGCCTCGGCCGCGGCGTACGCCGCCCGCGCCGGGCTGACCTGCGCGGTGCTGGTTCCCAGCGGCAAGA TCGCCCTCGGCAAGCTCGCGCAGGCCCTGGTGCACGGCGCGCGCCTGCTCCAGGTGGAGGGGTCGTTCGACGACTGCCTC CGGGTCGCCCGCGAGCTGGCCGACACGTTCCCGGTCACGCTGGTGAACTCGGTCAACCCGCACCGCCTGGAGGGGCAGAA GACCGCCGCCTTCGAGATCGTCGAGGCGCTCGGCCACGCGCCCGACGTGCACTGCCTGCCGGTCGGGAACGCGGGTAACA TCACCGCCTACTGGCGCGGCTACGTCGAGGAGGACACCCGGATCCGGTCCGGCCGGCCGCGGATGTTCGGGTTCCAGGCG GCGGGCGCGGCGCCGATCGTGCGGGGCGAGGTGGTGACCTCGCCGCAGACCATCGCCACGGCCATCCGCATCGGCAACCC GGCCTCCTGGGATTTCGCGACCGACGCGCGGGACGCCTCCGGCGGTCTGATCGACGCGGTCAACGACCGGCAGATCCTGG CCGCCTACCGGCTGCTGGCGCGCCGCGAGGGCGTCTTCGTCGAGCCGTCCAGTGCCGCCAGCGTCGCCGGGCTGCTCGCC ACGTACGCCGACGGCCGGCTGAGCCCGGGCCAGCGGGTCGTCTGCACCGTCACCGGCAACGGGCTGAAGGACCCGGACTG GGCCATCAGCGGCGCGGCGAAGCCCGAGACCATCCCGCCGACCGTGGCCGGCGCCGCCAGGGCCCTCGGCCTGCAGCGGT CGTGA
Upstream 100 bases:
>100_bases CGGCCGCGGATGCGGCGCTGTCCACGACCGTCGAGGACCTGCGGGTTCTCGACGGGGTGCGTGCGGTGTCGGGCGTGGTA CGGGTCGAGGGAGTTGAGTC
Downstream 100 bases:
>100_bases CGACCGCCGACGGCCTCGCCGCCGGTGCCGCCGGCAGCGCCTCGGGAAGCGGTACGGCCAGCGCGTCGGCGAATGCCTCC GTCAGCACACGGGTGAGCAC
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTTMSSMPVSSDPAGSSAPERASRAWRGIIEEYRDRLPVTADTPVITLREGGTPLLHADHLSELTGCDVHLKVEGANPTG SFKDRGMTVAISRAVGEGSQAVICASTGNTSASAAAYAARAGLTCAVLVPSGKIALGKLAQALVHGARLLQVEGSFDDCL RVARELADTFPVTLVNSVNPHRLEGQKTAAFEIVEALGHAPDVHCLPVGNAGNITAYWRGYVEEDTRIRSGRPRMFGFQA AGAAPIVRGEVVTSPQTIATAIRIGNPASWDFATDARDASGGLIDAVNDRQILAAYRLLARREGVFVEPSSAASVAGLLA TYADGRLSPGQRVVCTVTGNGLKDPDWAISGAAKPETIPPTVAGAARALGLQRS
Sequences:
>Translated_374_residues MTTMSSMPVSSDPAGSSAPERASRAWRGIIEEYRDRLPVTADTPVITLREGGTPLLHADHLSELTGCDVHLKVEGANPTG SFKDRGMTVAISRAVGEGSQAVICASTGNTSASAAAYAARAGLTCAVLVPSGKIALGKLAQALVHGARLLQVEGSFDDCL RVARELADTFPVTLVNSVNPHRLEGQKTAAFEIVEALGHAPDVHCLPVGNAGNITAYWRGYVEEDTRIRSGRPRMFGFQA AGAAPIVRGEVVTSPQTIATAIRIGNPASWDFATDARDASGGLIDAVNDRQILAAYRLLARREGVFVEPSSAASVAGLLA TYADGRLSPGQRVVCTVTGNGLKDPDWAISGAAKPETIPPTVAGAARALGLQRS >Mature_373_residues TTMSSMPVSSDPAGSSAPERASRAWRGIIEEYRDRLPVTADTPVITLREGGTPLLHADHLSELTGCDVHLKVEGANPTGS FKDRGMTVAISRAVGEGSQAVICASTGNTSASAAAYAARAGLTCAVLVPSGKIALGKLAQALVHGARLLQVEGSFDDCLR VARELADTFPVTLVNSVNPHRLEGQKTAAFEIVEALGHAPDVHCLPVGNAGNITAYWRGYVEEDTRIRSGRPRMFGFQAA GAAPIVRGEVVTSPQTIATAIRIGNPASWDFATDARDASGGLIDAVNDRQILAAYRLLARREGVFVEPSSAASVAGLLAT YADGRLSPGQRVVCTVTGNGLKDPDWAISGAAKPETIPPTVAGAARALGLQRS
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=322, Percent_Identity=27.0186335403727, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322631, Length=318, Percent_Identity=26.1006289308176, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 38942; Mature: 38811
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMSSMPVSSDPAGSSAPERASRAWRGIIEEYRDRLPVTADTPVITLREGGTPLLHADH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHH LSELTGCDVHLKVEGANPTGSFKDRGMTVAISRAVGEGSQAVICASTGNTSASAAAYAAR HHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHH AGLTCAVLVPSGKIALGKLAQALVHGARLLQVEGSFDDCLRVARELADTFPVTLVNSVNP CCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCC HRLEGQKTAAFEIVEALGHAPDVHCLPVGNAGNITAYWRGYVEEDTRIRSGRPRMFGFQA CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECEECCCCEECCCCCCEEEEEC AGAAPIVRGEVVTSPQTIATAIRIGNPASWDFATDARDASGGLIDAVNDRQILAAYRLLA CCCCCEEECEEECCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RREGVFVEPSSAASVAGLLATYADGRLSPGQRVVCTVTGNGLKDPDWAISGAAKPETIPP HCCCCEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCC TVAGAARALGLQRS HHHHHHHHHCCCCC >Mature Secondary Structure TTMSSMPVSSDPAGSSAPERASRAWRGIIEEYRDRLPVTADTPVITLREGGTPLLHADH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHH LSELTGCDVHLKVEGANPTGSFKDRGMTVAISRAVGEGSQAVICASTGNTSASAAAYAAR HHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHH AGLTCAVLVPSGKIALGKLAQALVHGARLLQVEGSFDDCLRVARELADTFPVTLVNSVNP CCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCC HRLEGQKTAAFEIVEALGHAPDVHCLPVGNAGNITAYWRGYVEEDTRIRSGRPRMFGFQA CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECEECCCCEECCCCCCEEEEEC AGAAPIVRGEVVTSPQTIATAIRIGNPASWDFATDARDASGGLIDAVNDRQILAAYRLLA CCCCCEEECEEECCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RREGVFVEPSSAASVAGLLATYADGRLSPGQRVVCTVTGNGLKDPDWAISGAAKPETIPP HCCCCEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCC TVAGAARALGLQRS HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA