| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ylaK [H]
Identifier: 158312690
GI number: 158312690
Start: 976815
End: 978107
Strand: Direct
Name: ylaK [H]
Synonym: Franean1_0834
Alternate gene names: 158312690
Gene position: 976815-978107 (Clockwise)
Preceding gene: 158312689
Following gene: 158312691
Centisome position: 10.88
GC content: 70.07
Gene sequence:
>1293_bases GTGCCACGAACGCATGTCGTCGACACAAGCGTGCTGCTCTCTGATCCTGGCGCGCTGCTGCGGTTCGCGGAGCACAATGT CGTGCTCCCCCTGGTCGTCATAGGGGAGCTGGAAGGTAAGCGAAACCACCCGGAGCTGGGTTGGTTCGCCCGGGAGGCAC TGCGCATCCTGGATGACCTCCGGATCCGCCACGGCCGGCTGGACCAGCCACTGCCGTTGGAGACCGGTGGAACGCTCCGA GTGGAACTTAACCACACCGACTCGTCCGTGCTTCCACCGGGGTTCCGCGTGGACGACAACGACTCCAGGATCCTCTCGGT GGCCCTCAACCTCGCGCGCGAAGGCGCCGAGGTGGTGCTGGTCACGAAGGACCTGCCGCTGCGTGTGAAGGCATCCGTGG TCGGGCTCGCCGCGGAGGAATACCAGGCACTGTCGCCGGTGGACAGCGGCTGGAGCGGGATGGCGGAGCTGACCGTCAGC CAGGACGATCTCGACCGGCTCTACGCCAAGGAGCTCGTCGAGGTCGCGGAGGCGGCCGACCTGCCCTGCCACACCGGCCT CGTGCTCACCGCGCCCGGGGGGAGCGCCTCGGCGCTCGGGCGGGTCACCGCCGACAAGTCCATCCAGCTCGTCCGCGGCG ACCGCGACGCCTTCGGGCTGCACGGCCGCTCCGCGGAGCAGCGGGTGGCCCTCGACCTGCTCCTCGACCACGAGGTCGGC ATCGTCTCCCTCGGTGGCCGCGCGGGCACGGGAAAGTCCGCCCTCGCCCTGTGCGCCGGCCTCGAGGCGGTCATGGAACG CCGGCTGCACCGGCGGGTCGTCGTCTTCCGCCCGCTCTACGCCGTCGGCGGCCAGGACCTCGGCTACCTGCCCGGCAGCG AGAACGAGAAAATGGCACCGTGGGCGCAGGCCGTCTTCGACACCCTCGGCGCGCTCGTGTCGCCCGAGGTCATCGAGGAG ATCGTCGATCGGGGCATGCTCGAGGTGCTCCCGCTCACGCACATCCGCGGCCGCTCGCTGCACGACGCCTTCGTCATCGT GGACGAGGCACAGTCGCTTGAGCGGGGCGTGCTGCTGACGGTCCTGTCCCGGCTCGGCCAGGGCTCGCGGGTCGTCCTCA CCCACGACGTCGCCCAGCGCGACAACCTGCGGGTCGGCCGTCATGACGGAGTCGCCTCGGTCATCGAGACACTCAAGGGC CACCCCCTGTTCGCCCACGTCACCCTGACCCGCTCCGAGCGGTCCCCGATCGCCGCCCTCGTCACAACCATGCTCGAGGA CCTGGTGCTCTGA
Upstream 100 bases:
>100_bases AGGCCCCTCGGTGCCGCAACTGCGACAACGTCAGGAGGCCGGTACCCGGCTCCTGCTCAGGGGCCCGGTCCCGGATACCT CCGAGTAAGCGGGTGGGCGT
Downstream 100 bases:
>100_bases TCGTGCCCAACCGGTCGAACTGGCCCAGTTTGGCCTAACTGCCCCGAACCCCCGCCCCAACCATCCCGCATCCACTGGAC GTCCACCCTCACGGAACCTC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPRTHVVDTSVLLSDPGALLRFAEHNVVLPLVVIGELEGKRNHPELGWFAREALRILDDLRIRHGRLDQPLPLETGGTLR VELNHTDSSVLPPGFRVDDNDSRILSVALNLAREGAEVVLVTKDLPLRVKASVVGLAAEEYQALSPVDSGWSGMAELTVS QDDLDRLYAKELVEVAEAADLPCHTGLVLTAPGGSASALGRVTADKSIQLVRGDRDAFGLHGRSAEQRVALDLLLDHEVG IVSLGGRAGTGKSALALCAGLEAVMERRLHRRVVVFRPLYAVGGQDLGYLPGSENEKMAPWAQAVFDTLGALVSPEVIEE IVDRGMLEVLPLTHIRGRSLHDAFVIVDEAQSLERGVLLTVLSRLGQGSRVVLTHDVAQRDNLRVGRHDGVASVIETLKG HPLFAHVTLTRSERSPIAALVTTMLEDLVL
Sequences:
>Translated_430_residues MPRTHVVDTSVLLSDPGALLRFAEHNVVLPLVVIGELEGKRNHPELGWFAREALRILDDLRIRHGRLDQPLPLETGGTLR VELNHTDSSVLPPGFRVDDNDSRILSVALNLAREGAEVVLVTKDLPLRVKASVVGLAAEEYQALSPVDSGWSGMAELTVS QDDLDRLYAKELVEVAEAADLPCHTGLVLTAPGGSASALGRVTADKSIQLVRGDRDAFGLHGRSAEQRVALDLLLDHEVG IVSLGGRAGTGKSALALCAGLEAVMERRLHRRVVVFRPLYAVGGQDLGYLPGSENEKMAPWAQAVFDTLGALVSPEVIEE IVDRGMLEVLPLTHIRGRSLHDAFVIVDEAQSLERGVLLTVLSRLGQGSRVVLTHDVAQRDNLRVGRHDGVASVIETLKG HPLFAHVTLTRSERSPIAALVTTMLEDLVL >Mature_429_residues PRTHVVDTSVLLSDPGALLRFAEHNVVLPLVVIGELEGKRNHPELGWFAREALRILDDLRIRHGRLDQPLPLETGGTLRV ELNHTDSSVLPPGFRVDDNDSRILSVALNLAREGAEVVLVTKDLPLRVKASVVGLAAEEYQALSPVDSGWSGMAELTVSQ DDLDRLYAKELVEVAEAADLPCHTGLVLTAPGGSASALGRVTADKSIQLVRGDRDAFGLHGRSAEQRVALDLLLDHEVGI VSLGGRAGTGKSALALCAGLEAVMERRLHRRVVVFRPLYAVGGQDLGYLPGSENEKMAPWAQAVFDTLGALVSPEVIEEI VDRGMLEVLPLTHIRGRSLHDAFVIVDEAQSLERGVLLTVLSRLGQGSRVVLTHDVAQRDNLRVGRHDGVASVIETLKGH PLFAHVTLTRSERSPIAALVTTMLEDLVL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=180, Percent_Identity=34.4444444444444, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787257, Length=189, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 46436; Mature: 46305
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTHVVDTSVLLSDPGALLRFAEHNVVLPLVVIGELEGKRNHPELGWFAREALRILDDL CCCCEEEECEEEECCCCHHEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH RIRHGRLDQPLPLETGGTLRVELNHTDSSVLPPGFRVDDNDSRILSVALNLAREGAEVVL HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEE VTKDLPLRVKASVVGLAAEEYQALSPVDSGWSGMAELTVSQDDLDRLYAKELVEVAEAAD EECCCCEEEEHHEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC LPCHTGLVLTAPGGSASALGRVTADKSIQLVRGDRDAFGLHGRSAEQRVALDLLLDHEVG CCCCCCEEEECCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCHHHHEEEEEEECCCC IVSLGGRAGTGKSALALCAGLEAVMERRLHRRVVVFRPLYAVGGQDLGYLPGSENEKMAP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCCCCCCCCCCCCCH WAQAVFDTLGALVSPEVIEEIVDRGMLEVLPLTHIRGRSLHDAFVIVDEAQSLERGVLLT HHHHHHHHHHHHCCHHHHHHHHCCCCEEHHCCHHCCCCCCCCEEEEEECHHHHHHHHHHH VLSRLGQGSRVVLTHDVAQRDNLRVGRHDGVASVIETLKGHPLFAHVTLTRSERSPIAAL HHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHH VTTMLEDLVL HHHHHHHHCC >Mature Secondary Structure PRTHVVDTSVLLSDPGALLRFAEHNVVLPLVVIGELEGKRNHPELGWFAREALRILDDL CCCEEEECEEEECCCCHHEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH RIRHGRLDQPLPLETGGTLRVELNHTDSSVLPPGFRVDDNDSRILSVALNLAREGAEVVL HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEE VTKDLPLRVKASVVGLAAEEYQALSPVDSGWSGMAELTVSQDDLDRLYAKELVEVAEAAD EECCCCEEEEHHEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC LPCHTGLVLTAPGGSASALGRVTADKSIQLVRGDRDAFGLHGRSAEQRVALDLLLDHEVG CCCCCCEEEECCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCHHHHEEEEEEECCCC IVSLGGRAGTGKSALALCAGLEAVMERRLHRRVVVFRPLYAVGGQDLGYLPGSENEKMAP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCCCCCCCCCCCCCH WAQAVFDTLGALVSPEVIEEIVDRGMLEVLPLTHIRGRSLHDAFVIVDEAQSLERGVLLT HHHHHHHHHHHHCCHHHHHHHHCCCCEEHHCCHHCCCCCCCCEEEEEECHHHHHHHHHHH VLSRLGQGSRVVLTHDVAQRDNLRVGRHDGVASVIETLKGHPLFAHVTLTRSERSPIAAL HHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHH VTTMLEDLVL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]