| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158312442
GI number: 158312442
Start: 677604
End: 678638
Strand: Direct
Name: yajO [H]
Synonym: Franean1_0585
Alternate gene names: 158312442
Gene position: 677604-678638 (Clockwise)
Preceding gene: 158312441
Following gene: 158312443
Centisome position: 7.54
GC content: 68.5
Gene sequence:
>1035_bases GTGAGATACCGCAGATTCGGAACAACCGGTGTCGAGGTAAGCACCCAGTGTCTGGGCACGATGAACTTCGGCCGGCTGGG TAACGTCGATCCCGACGACAGCGTGCGGGTCGTCAACCGCGCGCTGGACGGCGGAATCAACTTCATCGACACGGCCGACG TGTACTCCCACGGCGAGAGCGAGGAGATCATCGGACGGGCGGTGAAATCCCGCCGGGATGACGTGGTGCTGGCGACCAAG TGCTTCTTCCCCATGGGCGGCCAGCTTCAGCGGGGTTCCTCACGTCGATGGATCATGCAGGCTGTCGAGGGCAGCCTGCG CCGGCTGGGCACCGATCGCATCGACCTGTACCAGATACACAAGCTCGACTGGAACACCGATCTGGAGGAGACCCTCGGTG CCCTGACCGACCTCGTGCGGCAGGGCAAGGTCCTCTACCTGGGCTCGTCGTCGTTCCCGGCGGACTGGATCGTCGAGGCC CAGTGGACGGCGGCCCGGCGCGGCGGTGAACGGTTCGTCTGCGAGCAGCCGCAGTACTCGGTCTTCGCCCGGTCGGTGGA GCAGGCGGTCCTGCCCGCCTGCCAGCGGCATCGGATGGCGGTCATCCCCTGGAGCCCACTCGCCGGCGGCTGGCTGACCG GCAAGTACCAGCGCGGCCAGGAACCGCCGACCGGCTCACGCTACGACCCGGACAGCCCCTTCATGCAGGGAACCGTCAGC TCGGCCGCCGAGCGCTCCTCCCCTGTCCGGTTCGACGCCGTCGACGCCCTGCGCGGCGTCGCCGACCAGGCGGGCATCAC CCTGACCGAGCTGGCCATGGCCTTCGTCGCCAACCACCCCGCCATCACCTCGACGATCATCGGGCCGCGCACCATGAAGC ACCTCGAGGACGCGCTGAACGCGGCGGACGTCGACCTCGACGAGGACGTCCTCGACGCCATCGACAAGATCGTGCCTCCC GGCACCGACATGCCCGGGATCGACCACTTCACCCAGCACCCGGCCCTCCTGCCCGCCGCCCGCCGACGCACGTGA
Upstream 100 bases:
>100_bases TAGGCCCGTACAGATTCATCCCTACCGATCATTCGACCTACCGATCATCCGATGCCATGAAGGCGCGGCCGGCACGTGGC CAGCCCGCTGAGGGAGTCCT
Downstream 100 bases:
>100_bases AGGCCGCACGCCCCAAAGCGGGAGAGATCACCGTCGTCGACCTCGACGAGCCACCGGGAGTCGGGGACGAGGTCATCCGG ATCGCGGCAGCGAGCATCTG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MRYRRFGTTGVEVSTQCLGTMNFGRLGNVDPDDSVRVVNRALDGGINFIDTADVYSHGESEEIIGRAVKSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAAERSSPVRFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRT
Sequences:
>Translated_344_residues MRYRRFGTTGVEVSTQCLGTMNFGRLGNVDPDDSVRVVNRALDGGINFIDTADVYSHGESEEIIGRAVKSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAAERSSPVRFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRT >Mature_344_residues MRYRRFGTTGVEVSTQCLGTMNFGRLGNVDPDDSVRVVNRALDGGINFIDTADVYSHGESEEIIGRAVKSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAAERSSPVRFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=327, Percent_Identity=32.1100917431193, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI27436962, Length=326, Percent_Identity=31.2883435582822, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=30.9815950920245, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=30.8641975308642, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI27436966, Length=327, Percent_Identity=31.8042813455657, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=31.9354838709677, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI223718702, Length=319, Percent_Identity=29.4670846394984, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI41152114, Length=315, Percent_Identity=29.5238095238095, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI41327764, Length=318, Percent_Identity=29.2452830188679, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI223718708, Length=155, Percent_Identity=35.4838709677419, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87081735, Length=328, Percent_Identity=39.0243902439024, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=30.7471264367816, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=28.0966767371601, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1788070, Length=331, Percent_Identity=28.7009063444109, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788081, Length=298, Percent_Identity=26.510067114094, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787674, Length=332, Percent_Identity=24.0963855421687, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212645785, Length=332, Percent_Identity=25.6024096385542, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=345, Percent_Identity=29.8550724637681, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323998, Length=335, Percent_Identity=29.8507462686567, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6319958, Length=312, Percent_Identity=29.4871794871795, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6319951, Length=337, Percent_Identity=27.5964391691395, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6322615, Length=269, Percent_Identity=28.6245353159851, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321052, Length=151, Percent_Identity=33.112582781457, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646155, Length=319, Percent_Identity=28.2131661442006, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24640980, Length=335, Percent_Identity=24.1791044776119, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI45549126, Length=335, Percent_Identity=24.4776119402985, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646159, Length=192, Percent_Identity=30.7291666666667, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37900; Mature: 37900
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRRFGTTGVEVSTQCLGTMNFGRLGNVDPDDSVRVVNRALDGGINFIDTADVYSHGES CCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHCCCCH EEIIGRAVKSRRDDVVLATKCFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIH HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE KLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEAQWTAARRGGERFVCEQPQYS ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHCCCCCEEECCCCHH VFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SAAERSSPVRFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALN HHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH AADVDLDEDVLDAIDKIVPPGTDMPGIDHFTQHPALLPAARRRT HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCCC >Mature Secondary Structure MRYRRFGTTGVEVSTQCLGTMNFGRLGNVDPDDSVRVVNRALDGGINFIDTADVYSHGES CCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHCCCCH EEIIGRAVKSRRDDVVLATKCFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIH HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE KLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEAQWTAARRGGERFVCEQPQYS ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHCCCCCEEECCCCHH VFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SAAERSSPVRFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALN HHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH AADVDLDEDVLDAIDKIVPPGTDMPGIDHFTQHPALLPAARRRT HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]