| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp123 [H]
Identifier: 158312441
GI number: 158312441
Start: 676319
End: 677506
Strand: Direct
Name: cyp123 [H]
Synonym: Franean1_0584
Alternate gene names: 158312441
Gene position: 676319-677506 (Clockwise)
Preceding gene: 158312440
Following gene: 158312442
Centisome position: 7.53
GC content: 68.52
Gene sequence:
>1188_bases GTGACAGAAGACCTGTACTGGGACCCGTTCGACCGGGAGTTCCATGTCGACCCGCATCCGGTCTGGCACCGGATGCGGGA CGAGGCACCCGTGTACCGCAACGAGAAAATGGACTTCTACGCATTGTCCCGGTTCGCGGACGTCGACGCCGCCCATCTGG ACACCGCCACGTACAGCTCGGCGTACGGCACGGTTCTCGAACTCATGTCGCCCGAGCCGCTAAAGACCGGGCAGATAATC TTCATGGATCCGCCGATCCACACGACGCTGCGGGTGCTGGTCTCGAGGGCGTTCACGCCGCGTCGGGTCGGCGGGCTCGA GGGCCACATCCGGCAGATCTGCGCGGAGCTGCTGGACCGGCAGGTCGGCGGTGGCGGGTTCGACTACATCCAGGACTTCG CCGCACTGCTCCCGTCGATGGTGATCTCCCAGCTGATCGGGGTGGACCCGGCCGACCGTGAGGAGATCCGCCACACGATC GACCAGACCTTCCACCTTGATCCGGAGAAGGGGATGGTCAACGACATCTCGATGGCGGCGTCTGCCAAGTTCCACGCCTA CCTGTCCGAACAGCTGGAAGCGCGACGGGCTGCGCCCAGGGACGACATGATGACGGCACTCGTGCAGGCGGAGATCGCCA CCGACGGGGGGACCCGTCAGCTCACCACCTCCGAGGCCGCCGACTTCACCGCGCTGCTCGTGGCCGCCGGCACCGAGACC GTGGCGCGACTGCTCGGCTGGGCGTGTGATGCGCTCGAGGCGCACCCCGACCAGCGGGCGGAGCTGGCCGTGGACCCGTC GCTGCTGGGGAACGCGGTCGAGGAGACGCTGCGCTACGAGTCGCCGTCCCCCGTCCAGGGCCGCGTCACCACCCGGGACG TCGAACTCCACGGCACCACCATCCCGGCCCGGTCGAAGATCATCCTCCTGACCGCGTCCGCCGGGCGTGACGGGCGCAGG TATGACGACCCTGACCGCTTCGACATCAGGCGGCGGGTCGACAGCCACGTCGCGTTCGGCCGCGGGGCGCACTTCTGCCT CGGCGCGGCGCTCGCCCGGATGGAGGGGCGTATCGCGCTGGAGGAGACCCTGCGCCGCTTCCCGACCTGGGAGGTCGACC GTGACAATGCGGCACGGCTGCACACCAGCACCGTCCGCGGCTACGAGAAGCTCCCGATCGTCGTATAG
Upstream 100 bases:
>100_bases TCCACCGCCACGCGGCCGGCGAGACAACGAGGAGCCGCGCCATCCGCCCGAGCGGTGCTTCCCGCCGAATCCGGGTTCTG CGAAGAGAGGCCCGTCATCC
Downstream 100 bases:
>100_bases GCCCGTACAGATTCATCCCTACCGATCATTCGACCTACCGATCATCCGATGCCATGAAGGCGCGGCCGGCACGTGGCCAG CCCGCTGAGGGAGTCCTGTG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTEDLYWDPFDREFHVDPHPVWHRMRDEAPVYRNEKMDFYALSRFADVDAAHLDTATYSSAYGTVLELMSPEPLKTGQII FMDPPIHTTLRVLVSRAFTPRRVGGLEGHIRQICAELLDRQVGGGGFDYIQDFAALLPSMVISQLIGVDPADREEIRHTI DQTFHLDPEKGMVNDISMAASAKFHAYLSEQLEARRAAPRDDMMTALVQAEIATDGGTRQLTTSEAADFTALLVAAGTET VARLLGWACDALEAHPDQRAELAVDPSLLGNAVEETLRYESPSPVQGRVTTRDVELHGTTIPARSKIILLTASAGRDGRR YDDPDRFDIRRRVDSHVAFGRGAHFCLGAALARMEGRIALEETLRRFPTWEVDRDNAARLHTSTVRGYEKLPIVV
Sequences:
>Translated_395_residues MTEDLYWDPFDREFHVDPHPVWHRMRDEAPVYRNEKMDFYALSRFADVDAAHLDTATYSSAYGTVLELMSPEPLKTGQII FMDPPIHTTLRVLVSRAFTPRRVGGLEGHIRQICAELLDRQVGGGGFDYIQDFAALLPSMVISQLIGVDPADREEIRHTI DQTFHLDPEKGMVNDISMAASAKFHAYLSEQLEARRAAPRDDMMTALVQAEIATDGGTRQLTTSEAADFTALLVAAGTET VARLLGWACDALEAHPDQRAELAVDPSLLGNAVEETLRYESPSPVQGRVTTRDVELHGTTIPARSKIILLTASAGRDGRR YDDPDRFDIRRRVDSHVAFGRGAHFCLGAALARMEGRIALEETLRRFPTWEVDRDNAARLHTSTVRGYEKLPIVV >Mature_394_residues TEDLYWDPFDREFHVDPHPVWHRMRDEAPVYRNEKMDFYALSRFADVDAAHLDTATYSSAYGTVLELMSPEPLKTGQIIF MDPPIHTTLRVLVSRAFTPRRVGGLEGHIRQICAELLDRQVGGGGFDYIQDFAALLPSMVISQLIGVDPADREEIRHTID QTFHLDPEKGMVNDISMAASAKFHAYLSEQLEARRAAPRDDMMTALVQAEIATDGGTRQLTTSEAADFTALLVAAGTETV ARLLGWACDALEAHPDQRAELAVDPSLLGNAVEETLRYESPSPVQGRVTTRDVELHGTTIPARSKIILLTASAGRDGRRY DDPDRFDIRRRVDSHVAFGRGAHFCLGAALARMEGRIALEETLRRFPTWEVDRDNAARLHTSTVRGYEKLPIVV
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44108; Mature: 43977
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDLYWDPFDREFHVDPHPVWHRMRDEAPVYRNEKMDFYALSRFADVDAAHLDTATYSS CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHCHHHHHH AYGTVLELMSPEPLKTGQIIFMDPPIHTTLRVLVSRAFTPRRVGGLEGHIRQICAELLDR HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH QVGGGGFDYIQDFAALLPSMVISQLIGVDPADREEIRHTIDQTFHLDPEKGMVNDISMAA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHH SAKFHAYLSEQLEARRAAPRDDMMTALVQAEIATDGGTRQLTTSEAADFTALLVAAGTET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCHHH VARLLGWACDALEAHPDQRAELAVDPSLLGNAVEETLRYESPSPVQGRVTTRDVELHGTT HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC IPARSKIILLTASAGRDGRRYDDPDRFDIRRRVDSHVAFGRGAHFCLGAALARMEGRIAL CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH EETLRRFPTWEVDRDNAARLHTSTVRGYEKLPIVV HHHHHHCCCCCCCCCCCHHEEHHHHCCCCCCCCCC >Mature Secondary Structure TEDLYWDPFDREFHVDPHPVWHRMRDEAPVYRNEKMDFYALSRFADVDAAHLDTATYSS CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHCHHHHHH AYGTVLELMSPEPLKTGQIIFMDPPIHTTLRVLVSRAFTPRRVGGLEGHIRQICAELLDR HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHH QVGGGGFDYIQDFAALLPSMVISQLIGVDPADREEIRHTIDQTFHLDPEKGMVNDISMAA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHH SAKFHAYLSEQLEARRAAPRDDMMTALVQAEIATDGGTRQLTTSEAADFTALLVAAGTET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCHHH VARLLGWACDALEAHPDQRAELAVDPSLLGNAVEETLRYESPSPVQGRVTTRDVELHGTT HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC IPARSKIILLTASAGRDGRRYDDPDRFDIRRRVDSHVAFGRGAHFCLGAALARMEGRIAL CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH EETLRRFPTWEVDRDNAARLHTSTVRGYEKLPIVV HHHHHHCCCCCCCCCCCHHEEHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]