| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963936
Identifier: 157963936
GI number: 157963936
Start: 5009988
End: 5010830
Strand: Reverse
Name: 157963936
Synonym: Spea_4125
Alternate gene names: NA
Gene position: 5010830-5009988 (Counterclockwise)
Preceding gene: 157963937
Following gene: 157963935
Centisome position: 96.84
GC content: 50.53
Gene sequence:
>843_bases ATGGCGAATATATTACTGGTAGCAAACCTCAATTGTGATCGTATTTTTTTGCTCAACCATCCGCTTAAACCCGGCGGTCG ATTTCATTATAAAGATGGTGGTCAACGTCTAGGTGGAGGCGGTGCCAATACTGGTATCGGGTTAGTCTGGGCTAGGCATC AGGTATCCTTAGTGACAGAGGTTGGCCGAGATAAGGTTGGCGATTGGTTGATAGCCGAGGCGAGTACCCAAGGGATTAAC TGTAGCCAGATCCAACGCCGAGCAGGTAATACCTGTGAGATGTTGTTGATGATGACCCCTGATGGCGAGCGCACGATTAT TAGACCTGAGCGACCAAAATTCGAGTTACCTTTGCCGCCAAGCTGGACAGATGTCGATGCCCTGTATATCAACTCCTCAA CTGAAGGCGCGGCGAGTTGGTCTAAAACGGCCATGCCTCATTGTTGGGTGGTGGCTCAGCTAGCAAAAGATGAGCGGGCG CGGCCATGTCATGTACTTATCGCATCGTTAAGCGATATGCAGGGGCGTTGCAAGGGGGATCCTTGGCAGTTTGCTCAAGC GATAGCGGGTAAAAAACTAAAGTATTTTGTGGTAACAGATGGTGAGCATGGTGCCACGGCGTACAGTTCAAACGATCCTA TACACGTAGCAGCAGTGCCAAGCCAAGTTGTTGATACCACTGGTGCTGGGGACGCTTATGCCGCAGGACTTATTCATGGC TTAGTCAGTCAACAAACCATGAAAGAGTCGATGCAGGAAGCCGCGGTTTGGTCAGGGTTTGCTGTGGCGTGTAACAGCTC TATCCCGGGTAAGGGCTTGAAACAGCATTTATCGCCGGAGTAG
Upstream 100 bases:
>100_bases TGCGACGACTTGCCCTTTATGACACATGTTTATCCAACAGCTTGGAACTGGCTCGTAAATCTCTTACTATCGGTCTAATT ATCTTTCTTATCGAAAAGTC
Downstream 100 bases:
>100_bases TCCTTGGTTATAACTAAGCCATATCTAAGCGATATCTAAGTCATGGCTAAATCATATCGATGTCATCTCTGTGACATACA AGTGTCATCTTCAGCGTCTA
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Carbohydrate Kinase PfkB Family; Site-Specific DNA-Methyltransferase; PfkB Family Carbohydrate Kinase; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MANILLVANLNCDRIFLLNHPLKPGGRFHYKDGGQRLGGGGANTGIGLVWARHQVSLVTEVGRDKVGDWLIAEASTQGIN CSQIQRRAGNTCEMLLMMTPDGERTIIRPERPKFELPLPPSWTDVDALYINSSTEGAASWSKTAMPHCWVVAQLAKDERA RPCHVLIASLSDMQGRCKGDPWQFAQAIAGKKLKYFVVTDGEHGATAYSSNDPIHVAAVPSQVVDTTGAGDAYAAGLIHG LVSQQTMKESMQEAAVWSGFAVACNSSIPGKGLKQHLSPE
Sequences:
>Translated_280_residues MANILLVANLNCDRIFLLNHPLKPGGRFHYKDGGQRLGGGGANTGIGLVWARHQVSLVTEVGRDKVGDWLIAEASTQGIN CSQIQRRAGNTCEMLLMMTPDGERTIIRPERPKFELPLPPSWTDVDALYINSSTEGAASWSKTAMPHCWVVAQLAKDERA RPCHVLIASLSDMQGRCKGDPWQFAQAIAGKKLKYFVVTDGEHGATAYSSNDPIHVAAVPSQVVDTTGAGDAYAAGLIHG LVSQQTMKESMQEAAVWSGFAVACNSSIPGKGLKQHLSPE >Mature_279_residues ANILLVANLNCDRIFLLNHPLKPGGRFHYKDGGQRLGGGGANTGIGLVWARHQVSLVTEVGRDKVGDWLIAEASTQGINC SQIQRRAGNTCEMLLMMTPDGERTIIRPERPKFELPLPPSWTDVDALYINSSTEGAASWSKTAMPHCWVVAQLAKDERAR PCHVLIASLSDMQGRCKGDPWQFAQAIAGKKLKYFVVTDGEHGATAYSSNDPIHVAAVPSQVVDTTGAGDAYAAGLIHGL VSQQTMKESMQEAAVWSGFAVACNSSIPGKGLKQHLSPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30146; Mature: 30014
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANILLVANLNCDRIFLLNHPLKPGGRFHYKDGGQRLGGGGANTGIGLVWARHQVSLVTE CCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHH VGRDKVGDWLIAEASTQGINCSQIQRRAGNTCEMLLMMTPDGERTIIRPERPKFELPLPP HCCHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCEECCCCC SWTDVDALYINSSTEGAASWSKTAMPHCWVVAQLAKDERARPCHVLIASLSDMQGRCKGD CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEHEEHHHCCCCCCCCC PWQFAQAIAGKKLKYFVVTDGEHGATAYSSNDPIHVAAVPSQVVDTTGAGDAYAAGLIHG HHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEECCHHHHCCCCCCHHHHHHHHHH LVSQQTMKESMQEAAVWSGFAVACNSSIPGKGLKQHLSPE HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCC >Mature Secondary Structure ANILLVANLNCDRIFLLNHPLKPGGRFHYKDGGQRLGGGGANTGIGLVWARHQVSLVTE CCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHH VGRDKVGDWLIAEASTQGINCSQIQRRAGNTCEMLLMMTPDGERTIIRPERPKFELPLPP HCCHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCEECCCCC SWTDVDALYINSSTEGAASWSKTAMPHCWVVAQLAKDERARPCHVLIASLSDMQGRCKGD CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEHEEHHHCCCCCCCCC PWQFAQAIAGKKLKYFVVTDGEHGATAYSSNDPIHVAAVPSQVVDTTGAGDAYAAGLIHG HHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEECCHHHHCCCCCCHHHHHHHHHH LVSQQTMKESMQEAAVWSGFAVACNSSIPGKGLKQHLSPE HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA