| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963822
Identifier: 157963822
GI number: 157963822
Start: 4871560
End: 4874112
Strand: Direct
Name: 157963822
Synonym: Spea_4011
Alternate gene names: NA
Gene position: 4871560-4874112 (Clockwise)
Preceding gene: 157963820
Following gene: 157963824
Centisome position: 94.14
GC content: 48.96
Gene sequence:
>2553_bases ATGAAAAACTCCATGCTCAGAATCTGTCTTGTTTTTTTGTGTGCTTTTTTGATCTCATCCTCCTTTTTTGCCGAAGCAAA GAAGACGCGTTTAACAGACAGCCCGCTCTATGGTGTCAACACCACTAGCCCCGAAGAGTTTTTAGGCTACCCACTCGGAG AGCGCTTACTTAGACACGACCAGATTAATTACTACCTCAAACAGATCGCCACACAAAACCCCAGAGTATCGCTAGAAAAT ACAGGCCAAAGTCATGAGGCAAGGCAGCAGTTAACCGCCGTTATCACCTCGGTAAACAACCAGTCAAAGCTGGATGAAAT CTTAGCTCAGAGACAGCAAGTCAAATATCTAGGTAAGCAAGGTGGACCACTAATTATCTGGCTTGCCTACTCGATTCATG GCGACGAGATCAGCGGCGCCCATAGCGCACTAAAGCTTAGCCATATGCTGGCCACCAGCGAAGATAAATGGGTTAAGGAG TTACTTGAGCAAGCAGTTGTACTCATCACCCCGAGCCAAAATCCCGATGGACTCGACCGATTTTCAACTTGGGCCACTGG CTATGCCGGCAAAGTTGTTGTCAGCGACCCGAATCATAAGGAGCATAAACAGGGCTGGCCTACGGGTAGAAGTAACCATT ATTTTGCCGACCTTAATCGCGACTGGCTGTTTCTACGTCATCCCGAATCTCAAGGTCGTGTCGCCCTATTTCACCGCTGG CAGCCCCACTATGTGGGCGACTTTCATGAGATGGGCCATAACTTCACTTACTTTTTCCAGCCCGGCGTCCCCGAACGCAC CCATCCACTTACCCCAGCTGGCAACCAGAAGCTCACTGCAAAATTGGCCGCCTACCACCAAGCCGCGCTAGATGATAATA AGCAGAGTTACTTTAGCCGTCAGTTATTCGATGATTTCTTCTATGGCAAAGGCTCTACCTATCCCGATATCAACGGTGCC ATAGGGGTCTTGTTTGAACAGGCGAGCGCCCGCGGCCAACAACAGGACTCGGTCAATGGCATAGTGCACCTGCAAGAGGG CATAGAGAATCAATATGCGACCTCAATCTCAAGCCTCAAAGGTGCCTTGGCGTTAAAGTCGGAACTAGAGCAATATCAGG CCGAATTTTTTAAGGGTAAGCATCAGAAAGCGATGAAGAAAAAGCCTCGTCAGGCAGGGCTACTACTCACGACCAACAAG GATCCAAGCCGGATCCGAGCGCTCACAGAGCTGCTCAGCCAGCACAAAATAGAATATTACTACCTCACCAATAAACTCAC TCAGTCTGGCATCGATTTTGGGGTCGATAGCAGTATTTTCATCCCCAACAAACAGGCACAGAGTGCGCTACTCGAGGCAA TGTTTGACGACAGAAGCGAATTTGTCGATCCGACCTTTTACGATATCTCCACCTGGGATCTGCAACATGCATTCAATCTC AACCTGCGTCGCAACGTTAAACTCGAACTCAGCGTACTCAGCCAAACACCAGCGGAATTTGTGCCTCCGAGTTGGAACAA GAATGCTGTCGCCCTACTCATAGACTGGCGTGACAGCCAAGCAGCTTTATTGCTGCAGCAATTGCTCAAGCAAGAGATCA AGGTTAAATTTGCCGCCAAGCCGTTTAGCATATTGAGCACAAATGGCGAGATAGACTTTGCTGCTGGTACTCTGCAAGTG CCGCTAAAGCAAGATAACATCTCGGCAAGCGAGATAGGCCAGCGCGTGCAACAATTAGCGCAACAGTTTAAGGTGAATGT TATCGCGGCTAATACCAGCGCCGCTAGCAAAGGCATAGATCTAGGCAGCCCTGACTTTAACCTGATAAAGCCTATTCGCC CTCTCATCGTAAGCGGTAAAGGCACCTCTGTTTCCGAGGTCGGCCAGCTATGGTATTACTTAGATAACACCTTAGGCGTC GCCACCACTCTGGTCGATAGCAAGGATCTCACGTCGATAACATTAGCCGATTACAGTCATGTGCTACTAGCCGATGGCAA CTACAAAACCTTAAGCGATCGTTTTGCCCGTAAGCTGGGTCAGTTTACCTCTGAAGGTGGTGTGGTCATTGCACAAAAAC GCGCACTGAACTGGCTAAGTGATTCCAACTTACTTAAAACCGATCCCCGCAGTGAGCGATTCTATAAGCAGCTGTTTGAT GCCGATGGTCTCTCGTTCGAGCAGAAATCAAATTTCAGTGCCAAACAACAGATAGGTGGCGCAATCGTCGAACTGAAACT CGATACTAGCCATCCCATCAGCTTTGGCCTCAACGGCGATCGTCTGCCAGTGATGAAAAATAAGGTATTGGGCTTCTCAC AAACCACCAAAGCCTTTTCTGTCGCGGCAAACTACGCCTCTGAGCCGCTACTAAGCGGCTACCTTGCTAAGGAATACCAG AATAGCTTCAGTGATTCACCGGCGATTATCGTCGAGTCACGTAACAAGGGCGCCATCGTGGCACTAGCCGATAATCTGCT GTTTAGAAATATTTGGCTTGGCTCTGAGAAAGCTTATGCCAATGCGCTTTACTTCATTCCAGCGCTGCACTAA
Upstream 100 bases:
>100_bases GATTAAGAATAAATAGCGATTGCGTCACAGTTTTTTATCTTCACCTAGAGTGGTTTTGTCGCCTCCGAGCTGTTAATTTA ACCGCTATATTATAAATATA
Downstream 100 bases:
>100_bases TAGCCCCTTAACTGTCACTCGATAGCTATAGCATTTAGCGGCGCCCCGGTGCCTCGGCTCTAGCCAGGCACCAAACTTGA ACCTGAGTGTGCTTTCGCTG
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: Zinc-Dependent Carboxypeptidase Domain-Containing Protein; Zinc Carboxypeptidase; Zinc-Dependent Carboxypeptidase Domain-Conatining Protein; Deacylase/Carboxypeptidase Superfamily Protein; Zinc Carboxypeptidase Family; M14 Family Peptidase
Number of amino acids: Translated: 850; Mature: 850
Protein sequence:
>850_residues MKNSMLRICLVFLCAFLISSSFFAEAKKTRLTDSPLYGVNTTSPEEFLGYPLGERLLRHDQINYYLKQIATQNPRVSLEN TGQSHEARQQLTAVITSVNNQSKLDEILAQRQQVKYLGKQGGPLIIWLAYSIHGDEISGAHSALKLSHMLATSEDKWVKE LLEQAVVLITPSQNPDGLDRFSTWATGYAGKVVVSDPNHKEHKQGWPTGRSNHYFADLNRDWLFLRHPESQGRVALFHRW QPHYVGDFHEMGHNFTYFFQPGVPERTHPLTPAGNQKLTAKLAAYHQAALDDNKQSYFSRQLFDDFFYGKGSTYPDINGA IGVLFEQASARGQQQDSVNGIVHLQEGIENQYATSISSLKGALALKSELEQYQAEFFKGKHQKAMKKKPRQAGLLLTTNK DPSRIRALTELLSQHKIEYYYLTNKLTQSGIDFGVDSSIFIPNKQAQSALLEAMFDDRSEFVDPTFYDISTWDLQHAFNL NLRRNVKLELSVLSQTPAEFVPPSWNKNAVALLIDWRDSQAALLLQQLLKQEIKVKFAAKPFSILSTNGEIDFAAGTLQV PLKQDNISASEIGQRVQQLAQQFKVNVIAANTSAASKGIDLGSPDFNLIKPIRPLIVSGKGTSVSEVGQLWYYLDNTLGV ATTLVDSKDLTSITLADYSHVLLADGNYKTLSDRFARKLGQFTSEGGVVIAQKRALNWLSDSNLLKTDPRSERFYKQLFD ADGLSFEQKSNFSAKQQIGGAIVELKLDTSHPISFGLNGDRLPVMKNKVLGFSQTTKAFSVAANYASEPLLSGYLAKEYQ NSFSDSPAIIVESRNKGAIVALADNLLFRNIWLGSEKAYANALYFIPALH
Sequences:
>Translated_850_residues MKNSMLRICLVFLCAFLISSSFFAEAKKTRLTDSPLYGVNTTSPEEFLGYPLGERLLRHDQINYYLKQIATQNPRVSLEN TGQSHEARQQLTAVITSVNNQSKLDEILAQRQQVKYLGKQGGPLIIWLAYSIHGDEISGAHSALKLSHMLATSEDKWVKE LLEQAVVLITPSQNPDGLDRFSTWATGYAGKVVVSDPNHKEHKQGWPTGRSNHYFADLNRDWLFLRHPESQGRVALFHRW QPHYVGDFHEMGHNFTYFFQPGVPERTHPLTPAGNQKLTAKLAAYHQAALDDNKQSYFSRQLFDDFFYGKGSTYPDINGA IGVLFEQASARGQQQDSVNGIVHLQEGIENQYATSISSLKGALALKSELEQYQAEFFKGKHQKAMKKKPRQAGLLLTTNK DPSRIRALTELLSQHKIEYYYLTNKLTQSGIDFGVDSSIFIPNKQAQSALLEAMFDDRSEFVDPTFYDISTWDLQHAFNL NLRRNVKLELSVLSQTPAEFVPPSWNKNAVALLIDWRDSQAALLLQQLLKQEIKVKFAAKPFSILSTNGEIDFAAGTLQV PLKQDNISASEIGQRVQQLAQQFKVNVIAANTSAASKGIDLGSPDFNLIKPIRPLIVSGKGTSVSEVGQLWYYLDNTLGV ATTLVDSKDLTSITLADYSHVLLADGNYKTLSDRFARKLGQFTSEGGVVIAQKRALNWLSDSNLLKTDPRSERFYKQLFD ADGLSFEQKSNFSAKQQIGGAIVELKLDTSHPISFGLNGDRLPVMKNKVLGFSQTTKAFSVAANYASEPLLSGYLAKEYQ NSFSDSPAIIVESRNKGAIVALADNLLFRNIWLGSEKAYANALYFIPALH >Mature_850_residues MKNSMLRICLVFLCAFLISSSFFAEAKKTRLTDSPLYGVNTTSPEEFLGYPLGERLLRHDQINYYLKQIATQNPRVSLEN TGQSHEARQQLTAVITSVNNQSKLDEILAQRQQVKYLGKQGGPLIIWLAYSIHGDEISGAHSALKLSHMLATSEDKWVKE LLEQAVVLITPSQNPDGLDRFSTWATGYAGKVVVSDPNHKEHKQGWPTGRSNHYFADLNRDWLFLRHPESQGRVALFHRW QPHYVGDFHEMGHNFTYFFQPGVPERTHPLTPAGNQKLTAKLAAYHQAALDDNKQSYFSRQLFDDFFYGKGSTYPDINGA IGVLFEQASARGQQQDSVNGIVHLQEGIENQYATSISSLKGALALKSELEQYQAEFFKGKHQKAMKKKPRQAGLLLTTNK DPSRIRALTELLSQHKIEYYYLTNKLTQSGIDFGVDSSIFIPNKQAQSALLEAMFDDRSEFVDPTFYDISTWDLQHAFNL NLRRNVKLELSVLSQTPAEFVPPSWNKNAVALLIDWRDSQAALLLQQLLKQEIKVKFAAKPFSILSTNGEIDFAAGTLQV PLKQDNISASEIGQRVQQLAQQFKVNVIAANTSAASKGIDLGSPDFNLIKPIRPLIVSGKGTSVSEVGQLWYYLDNTLGV ATTLVDSKDLTSITLADYSHVLLADGNYKTLSDRFARKLGQFTSEGGVVIAQKRALNWLSDSNLLKTDPRSERFYKQLFD ADGLSFEQKSNFSAKQQIGGAIVELKLDTSHPISFGLNGDRLPVMKNKVLGFSQTTKAFSVAANYASEPLLSGYLAKEYQ NSFSDSPAIIVESRNKGAIVALADNLLFRNIWLGSEKAYANALYFIPALH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94956; Mature: 94956
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSMLRICLVFLCAFLISSSFFAEAKKTRLTDSPLYGVNTTSPEEFLGYPLGERLLRHD CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH QINYYLKQIATQNPRVSLENTGQSHEARQQLTAVITSVNNQSKLDEILAQRQQVKYLGKQ HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GGPLIIWLAYSIHGDEISGAHSALKLSHMLATSEDKWVKELLEQAVVLITPSQNPDGLDR CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCCHHH FSTWATGYAGKVVVSDPNHKEHKQGWPTGRSNHYFADLNRDWLFLRHPESQGRVALFHRW HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEC QPHYVGDFHEMGHNFTYFFQPGVPERTHPLTPAGNQKLTAKLAAYHQAALDDNKQSYFSR CCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH QLFDDFFYGKGSTYPDINGAIGVLFEQASARGQQQDSVNGIVHLQEGIENQYATSISSLK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH GALALKSELEQYQAEFFKGKHQKAMKKKPRQAGLLLTTNKDPSRIRALTELLSQHKIEYY HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEE YLTNKLTQSGIDFGVDSSIFIPNKQAQSALLEAMFDDRSEFVDPTFYDISTWDLQHAFNL EEECHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHCCCCEEECEEECCHHHCCC NLRRNVKLELSVLSQTPAEFVPPSWNKNAVALLIDWRDSQAALLLQQLLKQEIKVKFAAK CEEECCEEEEEEECCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEECCC PFSILSTNGEIDFAAGTLQVPLKQDNISASEIGQRVQQLAQQFKVNVIAANTSAASKGID CEEEEECCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC LGSPDFNLIKPIRPLIVSGKGTSVSEVGQLWYYLDNTLGVATTLVDSKDLTSITLADYSH CCCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEECCCCE VLLADGNYKTLSDRFARKLGQFTSEGGVVIAQKRALNWLSDSNLLKTDPRSERFYKQLFD EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHC ADGLSFEQKSNFSAKQQIGGAIVELKLDTSHPISFGLNGDRLPVMKNKVLGFSQTTKAFS CCCCCCHHCCCCCHHHHCCCEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCHHHHHHH VAANYASEPLLSGYLAKEYQNSFSDSPAIIVESRNKGAIVALADNLLFRNIWLGSEKAYA HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEHHEECCCCHHHC NALYFIPALH CEEEEEECCC >Mature Secondary Structure MKNSMLRICLVFLCAFLISSSFFAEAKKTRLTDSPLYGVNTTSPEEFLGYPLGERLLRHD CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH QINYYLKQIATQNPRVSLENTGQSHEARQQLTAVITSVNNQSKLDEILAQRQQVKYLGKQ HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GGPLIIWLAYSIHGDEISGAHSALKLSHMLATSEDKWVKELLEQAVVLITPSQNPDGLDR CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCCHHH FSTWATGYAGKVVVSDPNHKEHKQGWPTGRSNHYFADLNRDWLFLRHPESQGRVALFHRW HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEC QPHYVGDFHEMGHNFTYFFQPGVPERTHPLTPAGNQKLTAKLAAYHQAALDDNKQSYFSR CCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH QLFDDFFYGKGSTYPDINGAIGVLFEQASARGQQQDSVNGIVHLQEGIENQYATSISSLK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH GALALKSELEQYQAEFFKGKHQKAMKKKPRQAGLLLTTNKDPSRIRALTELLSQHKIEYY HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEE YLTNKLTQSGIDFGVDSSIFIPNKQAQSALLEAMFDDRSEFVDPTFYDISTWDLQHAFNL EEECHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHCCCCEEECEEECCHHHCCC NLRRNVKLELSVLSQTPAEFVPPSWNKNAVALLIDWRDSQAALLLQQLLKQEIKVKFAAK CEEECCEEEEEEECCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEECCC PFSILSTNGEIDFAAGTLQVPLKQDNISASEIGQRVQQLAQQFKVNVIAANTSAASKGID CEEEEECCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCC LGSPDFNLIKPIRPLIVSGKGTSVSEVGQLWYYLDNTLGVATTLVDSKDLTSITLADYSH CCCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEECCCCE VLLADGNYKTLSDRFARKLGQFTSEGGVVIAQKRALNWLSDSNLLKTDPRSERFYKQLFD EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHC ADGLSFEQKSNFSAKQQIGGAIVELKLDTSHPISFGLNGDRLPVMKNKVLGFSQTTKAFS CCCCCCHHCCCCCHHHHCCCEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCHHHHHHH VAANYASEPLLSGYLAKEYQNSFSDSPAIIVESRNKGAIVALADNLLFRNIWLGSEKAYA HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEHHEECCCCHHHC NALYFIPALH CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA