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The map label for this gene is ctaA [H]

Identifier: 157963816

GI number: 157963816

Start: 4865611

End: 4866594

Strand: Direct

Name: ctaA [H]

Synonym: Spea_4005

Alternate gene names: 157963816

Gene position: 4865611-4866594 (Clockwise)

Preceding gene: 157963815

Following gene: 157963817

Centisome position: 94.03

GC content: 48.27

Gene sequence:

>984_bases
ATGCAGATTAAGTCGTTATTAAAGATCACCTTAGTGTTTACTCTGTGTGTGATTTTAATGGGTGCCTACACTCGCCTATC
TGATGCGGGCCTTGGTTGCCCAGACTGGCCAGGCTGCTACGGTATGCTCAAGGTGCCTACCGAGATCCACGAGTTAAATC
AAGTTCAACAGGCATTCCCAGAACATACTGTCGAAACTGAAAAAGCTTGGCTAGAGATGATCCATCGCTATATCGCCGGC
ACCTTAGGCTTGCTAGTCCTACTAATTTTAGTACTCAGTCTTAAGACTGATGATGCCCCTAAGAAGCTGCCTATGTTTAT
AGCCGCGCTCATTATCTTTCAAGCGGCATTAGGCATGTGGACCGTAACGATGAAGTTGATGCCGATTATTGTGATGGCAC
ATCTACTGGGCGGGTTTGCGCTATTTTCACTACTGTTATTGCTCTATCTTCGCAGCAAACCACTACGGATCCCAGGTGGT
GACCCTGCAGCACGTAAACTGGCTGGCTTTGCCGCTATCTGTATCGGCGTTTTACTGCTGCAAATCGTATTAGGCGGCTG
GACATCATCAAATTATGCCGCGCTCGCCTGCACCACATTGCCTTTGTGTGAGGGGAATTGGGTCGACAACCTAAGCTTTG
CTAAAGCCTTCTCACCTTTTCAAGGGGATCATGCCAGCTTCGAATATGGCGTTTTAGATTACCCAGCCAGAATGACTATT
CATGTGGCCCACCGCGTCGGTGCCATCATTACTGCAGCCATGCTGTTGTACTTAGCATTTAAGCTCATTACCACGGCAAA
ATCTACCACGATACGTAATGCCGCTTGGCTACTCATGGCACTCGTGTTCGTTCAAGTGGGACTAGGGATTGGTAATGTCG
TCTTACACCTGCCGCTAGGTATCGCCGTCTCTCATAACGCTGGTGCAGCACTGTTGCTGCTTACCTTAGTATTTATCAAC
TACGCCTTATGGCGCAAAGCATAG

Upstream 100 bases:

>100_bases
TTAAAAGTCACCTTAGTGTTTAACTTATGCGTCATTATGCATAGGCAAGCCTATTCCCTATTAGCCATGACCAAATCCAG
CCTTATTGGAGGTGGTTACC

Downstream 100 bases:

>100_bases
AGGGCCTTAAATGACAACGACTAACGCCCTGATCTTACCGCACCAATACATCGCGAGGTTTCACTAATGGCAAAACAGAT
CGCATTACCAAGAAGCCAAA

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQIKSLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPTEIHELNQVQQAFPEHTVETEKAWLEMIHRYIAG
TLGLLVLLILVLSLKTDDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DPAARKLAGFAAICIGVLLLQIVLGGWTSSNYAALACTTLPLCEGNWVDNLSFAKAFSPFQGDHASFEYGVLDYPARMTI
HVAHRVGAIITAAMLLYLAFKLITTAKSTTIRNAAWLLMALVFVQVGLGIGNVVLHLPLGIAVSHNAGAALLLLTLVFIN
YALWRKA

Sequences:

>Translated_327_residues
MQIKSLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPTEIHELNQVQQAFPEHTVETEKAWLEMIHRYIAG
TLGLLVLLILVLSLKTDDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DPAARKLAGFAAICIGVLLLQIVLGGWTSSNYAALACTTLPLCEGNWVDNLSFAKAFSPFQGDHASFEYGVLDYPARMTI
HVAHRVGAIITAAMLLYLAFKLITTAKSTTIRNAAWLLMALVFVQVGLGIGNVVLHLPLGIAVSHNAGAALLLLTLVFIN
YALWRKA
>Mature_327_residues
MQIKSLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPTEIHELNQVQQAFPEHTVETEKAWLEMIHRYIAG
TLGLLVLLILVLSLKTDDAPKKLPMFIAALIIFQAALGMWTVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGG
DPAARKLAGFAAICIGVLLLQIVLGGWTSSNYAALACTTLPLCEGNWVDNLSFAKAFSPFQGDHASFEYGVLDYPARMTI
HVAHRVGAIITAAMLLYLAFKLITTAKSTTIRNAAWLLMALVFVQVGLGIGNVVLHLPLGIAVSHNAGAALLLLTLVFIN
YALWRKA

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 35568; Mature: 35568

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKSLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPTEIHELNQVQQAFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCC
EHTVETEKAWLEMIHRYIAGTLGLLVLLILVLSLKTDDAPKKLPMFIAALIIFQAALGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
TVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGGDPAARKLAGFAAICIGVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QIVLGGWTSSNYAALACTTLPLCEGNWVDNLSFAKAFSPFQGDHASFEYGVLDYPARMTI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
HVAHRVGAIITAAMLLYLAFKLITTAKSTTIRNAAWLLMALVFVQVGLGIGNVVLHLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
IAVSHNAGAALLLLTLVFINYALWRKA
EEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIKSLLKITLVFTLCVILMGAYTRLSDAGLGCPDWPGCYGMLKVPTEIHELNQVQQAFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCC
EHTVETEKAWLEMIHRYIAGTLGLLVLLILVLSLKTDDAPKKLPMFIAALIIFQAALGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
TVTMKLMPIIVMAHLLGGFALFSLLLLLYLRSKPLRIPGGDPAARKLAGFAAICIGVLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QIVLGGWTSSNYAALACTTLPLCEGNWVDNLSFAKAFSPFQGDHASFEYGVLDYPARMTI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
HVAHRVGAIITAAMLLYLAFKLITTAKSTTIRNAAWLLMALVFVQVGLGIGNVVLHLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
IAVSHNAGAALLLLTLVFINYALWRKA
EEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]