Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963815

Identifier: 157963815

GI number: 157963815

Start: 4864923

End: 4865465

Strand: Direct

Name: 157963815

Synonym: Spea_4004

Alternate gene names: NA

Gene position: 4864923-4865465 (Clockwise)

Preceding gene: 157963814

Following gene: 157963816

Centisome position: 94.02

GC content: 45.12

Gene sequence:

>543_bases
ATGAACTCCCCCAAAAAGAACGGCAAGAAAACGCTAATGTTATTAATACTGGCTTTTGCCCTGCCCGTCATGGCGGCAAA
ACTAGTACTCAGTTTCAATCTATACAATGGTGGCGCGACCAATAAAGGTCAGCTATTAGATAGCGTCAGCTATACCAATC
TAGCCATGGCTAATCCTCAGCCTCAAGAGTGGCAACTGTTATATCAATTACCTCGCCATTGCGATGTCATCTGTGAAGAT
AGGCTCTATATCTTACAGCAGAGCCATATTGCCCTCGGCCGTAATCAAGACCGCGTACACACCATCATTATGGTTAATCA
GCAAAGTGATACTGCCGCATTAACAGGCTTCGATTTTGTTACTGCCACACCATCTAAGCAGCTTAGCCAATTACTCAACC
AACAAGAATTCATTATCGTCGATCCCCTCGGCAGTTTAGTCATGAGCTATCCAATAGCCGAAGATCATCAAGCACAGATC
ATGCAAGGCAAGGCCTTAGTCGCCGATCTACGTAAGCTACTCAAGCTTTCGCGAATTGGCTAA

Upstream 100 bases:

>100_bases
TTTGATGGATTATTCTCAACCGTTTTTTAGCCGTTAATGACTAACTATATGCGTTAGCAGGTGCGCTAAATAGGATGAAA
TAACAGAAAGAGGAGATGGA

Downstream 100 bases:

>100_bases
AGGGGGGCTTTTATGAAAAATCAGTCTATGCAGATTAAGTCGTTATTAAAAGTCACCTTAGTGTTTAACTTATGCGTCAT
TATGCATAGGCAAGCCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNSPKKNGKKTLMLLILAFALPVMAAKLVLSFNLYNGGATNKGQLLDSVSYTNLAMANPQPQEWQLLYQLPRHCDVICED
RLYILQQSHIALGRNQDRVHTIIMVNQQSDTAALTGFDFVTATPSKQLSQLLNQQEFIIVDPLGSLVMSYPIAEDHQAQI
MQGKALVADLRKLLKLSRIG

Sequences:

>Translated_180_residues
MNSPKKNGKKTLMLLILAFALPVMAAKLVLSFNLYNGGATNKGQLLDSVSYTNLAMANPQPQEWQLLYQLPRHCDVICED
RLYILQQSHIALGRNQDRVHTIIMVNQQSDTAALTGFDFVTATPSKQLSQLLNQQEFIIVDPLGSLVMSYPIAEDHQAQI
MQGKALVADLRKLLKLSRIG
>Mature_180_residues
MNSPKKNGKKTLMLLILAFALPVMAAKLVLSFNLYNGGATNKGQLLDSVSYTNLAMANPQPQEWQLLYQLPRHCDVICED
RLYILQQSHIALGRNQDRVHTIIMVNQQSDTAALTGFDFVTATPSKQLSQLLNQQEFIIVDPLGSLVMSYPIAEDHQAQI
MQGKALVADLRKLLKLSRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20048; Mature: 20048

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPKKNGKKTLMLLILAFALPVMAAKLVLSFNLYNGGATNKGQLLDSVSYTNLAMANPQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCEEEECCCC
PQEWQLLYQLPRHCDVICEDRLYILQQSHIALGRNQDRVHTIIMVNQQSDTAALTGFDFV
CHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEE
TATPSKQLSQLLNQQEFIIVDPLGSLVMSYPIAEDHQAQIMQGKALVADLRKLLKLSRIG
ECCCHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSPKKNGKKTLMLLILAFALPVMAAKLVLSFNLYNGGATNKGQLLDSVSYTNLAMANPQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCEEEECCCC
PQEWQLLYQLPRHCDVICEDRLYILQQSHIALGRNQDRVHTIIMVNQQSDTAALTGFDFV
CHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEE
TATPSKQLSQLLNQQEFIIVDPLGSLVMSYPIAEDHQAQIMQGKALVADLRKLLKLSRIG
ECCCHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA