| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963684
Identifier: 157963684
GI number: 157963684
Start: 4718783
End: 4719481
Strand: Direct
Name: 157963684
Synonym: Spea_3873
Alternate gene names: NA
Gene position: 4718783-4719481 (Clockwise)
Preceding gene: 157963678
Following gene: 157963688
Centisome position: 91.19
GC content: 45.78
Gene sequence:
>699_bases ATGTGCGGCCGACTCAATATTATCGATGACATGTTTGTACAAGCGCTGATGCAAGACTTGCGAGTGAAGAACGCTGAGGA GATGCTGTTTGGACGCTTTAAAATGCCAACCAATGACATTAGCATCGTCCGCGAAATCGATGGTGAGCGCAGATTACAAA CCGCCACTTGGTGGTTACTGCTTGAGACTTGCTATGAAGGCTTCAAGCCCTGCCATTACACCTCATTTAACACCCGCTTT GATAAACTGAACACGCCCAATAGCGCAGGCTTTAAGCCATTTAGAGAGAGTCGTTGTGTAGTTGTAGCCAGTGGCTTTGG TGAAACTGAGAAGCGTGGCAAAGAGGTGTATTATCATGATTTTATCGCCGAGAACTCAGCGATAGTATTTGGTGGTCTGT TTCGAGAATGGCAACATCCTAAGACGGGTGAAACCACCACATCCTGTTCCATCATCACCAATCCACCGCACCCAGATCTA CTGCCTTATCACAGCAAGGCTAGCCCGATGATTTTGCCGCAAAATGATGAAGTGATTGATGCCTGGTTAAATCCTGCTAA CCAGCAGATAGAGATGTTTGATGACTTACTCAAGCCAGCTTTGAGGCATGACTTTATGGTGCAGCAAATAAATAAGCCAA GCCAGTATCAACCTATTGGTCAAACTGCTCGGCTTATTCCTAACGACTATTATGTCTAG
Upstream 100 bases:
>100_bases ACTATGAACCTCTACAGCTCATCCCCTTTTCAACTCACGCTATACTCAGTTCAAAATCGTTCATATACTCAATAGGGTGA TTTCTTTACGGTAATGATTT
Downstream 100 bases:
>100_bases GCCTTAACTGAACGTCTAGTTAAGATAAGCACTTAAGGTGTCTTGCTGATCCAGTAAACTTTGATACAAGGTAAACTGGT TGGCGGCGCGCTCTAGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MCGRLNIIDDMFVQALMQDLRVKNAEEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPCHYTSFNTRF DKLNTPNSAGFKPFRESRCVVVASGFGETEKRGKEVYYHDFIAENSAIVFGGLFREWQHPKTGETTTSCSIITNPPHPDL LPYHSKASPMILPQNDEVIDAWLNPANQQIEMFDDLLKPALRHDFMVQQINKPSQYQPIGQTARLIPNDYYV
Sequences:
>Translated_232_residues MCGRLNIIDDMFVQALMQDLRVKNAEEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPCHYTSFNTRF DKLNTPNSAGFKPFRESRCVVVASGFGETEKRGKEVYYHDFIAENSAIVFGGLFREWQHPKTGETTTSCSIITNPPHPDL LPYHSKASPMILPQNDEVIDAWLNPANQQIEMFDDLLKPALRHDFMVQQINKPSQYQPIGQTARLIPNDYYV >Mature_232_residues MCGRLNIIDDMFVQALMQDLRVKNAEEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPCHYTSFNTRF DKLNTPNSAGFKPFRESRCVVVASGFGETEKRGKEVYYHDFIAENSAIVFGGLFREWQHPKTGETTTSCSIITNPPHPDL LPYHSKASPMILPQNDEVIDAWLNPANQQIEMFDDLLKPALRHDFMVQQINKPSQYQPIGQTARLIPNDYYV
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26816; Mature: 26816
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGRLNIIDDMFVQALMQDLRVKNAEEMLFGRFKMPTNDISIVREIDGERRLQTATWWLL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH LETCYEGFKPCHYTSFNTRFDKLNTPNSAGFKPFRESRCVVVASGFGETEKRGKEVYYHD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEEHH FIAENSAIVFGGLFREWQHPKTGETTTSCSIITNPPHPDLLPYHSKASPMILPQNDEVID HHCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHH AWLNPANQQIEMFDDLLKPALRHDFMVQQINKPSQYQPIGQTARLIPNDYYV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MCGRLNIIDDMFVQALMQDLRVKNAEEMLFGRFKMPTNDISIVREIDGERRLQTATWWLL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH LETCYEGFKPCHYTSFNTRFDKLNTPNSAGFKPFRESRCVVVASGFGETEKRGKEVYYHD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEEHH FIAENSAIVFGGLFREWQHPKTGETTTSCSIITNPPHPDLLPYHSKASPMILPQNDEVID HHCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHH AWLNPANQQIEMFDDLLKPALRHDFMVQQINKPSQYQPIGQTARLIPNDYYV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA