| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963678
Identifier: 157963678
GI number: 157963678
Start: 4700246
End: 4701979
Strand: Direct
Name: 157963678
Synonym: Spea_3867
Alternate gene names: NA
Gene position: 4700246-4701979 (Clockwise)
Preceding gene: 157963676
Following gene: 157963684
Centisome position: 90.83
GC content: 49.54
Gene sequence:
>1734_bases ATGATGCCCAATACACCTCAAATTAGCTCTCCTCCATTATCTATACGCGCGATAGTTACAGGCATGATCCTAGGCAGCAT TCTGGTTCTGTGTAATCTATACATGGGGCTGCGTATTGGCTGGTCAATCAATATGTCGGTACTGGCATCCTTGCTCGGTT TTATTGCTTGGAAGGGGATCGGTGCGACTATCCCTTGCCGTGCTTGGAGCCCCCGTGAAGCAAACATACAGCAAACGGCG GCCTCTGCCGCGGGAGGCACATTATCGGCAGGACTCGTATCCGCCATCCCCGCCTATATGATCCTCAGTGAGTCTGAGTT TGATTATTGGCCGATGGTGATTTGGATGATAAGCATTAGCCTACTTGGGATCTGTGTCGCTTCAGCCATCAGACCCGCCA TGTTACATAATGAGCGTTTACGTTTTCCCGCCGGGATAGCGACTGCTGAGGTCATTAATGATATGTTTAGTGGCGCACGC ATTGCCCGCCATAAAACACTGGCATTACTATCGGCCATGGCCGTGACCATAGCACATCGCATCTTTATCCCTGTCAGCTA CAAAATACCACTGGGGTTTTCCATACCAGGCCAGGGAGCGGTAGCTGGAAGCAGTATTAGCGCAAAAAACTTAGGCTTTA TCATCGATCCCTCATACATGCTACTCGCTTTTGGCGCCATTATTGGAACCAAGTCGGCATTAAGCCTATTTGCAGGTGCA CTCATCGCTTGGTTAGGACTAGGCCCCTATATTGTGGGACAAGGCTGGGAACAAGCAGGGCCTGCAGATGGTCATTGGTT CAGTTACTTAATTGACTGGCTCGTTTGGCCCGGCGTAGCAATGATGCTCGCGTCCGCCGTTACCACTACCGCGATCTCAT TATTTAAGTCACAGAAGAAAGCTAGAATTACCTTGATGTGGGGCTGGCAGGAGTATTTACTACTGTCAGTATTAACCCCG ATCCTCATAGGTTTGCAAGTTTATCTATTCGATATTAGCTGGTTTGCGGCAATGCTGGCCGTGCCTTTAGCGTTTATATT TGCAATCGTTGCAGCGCAAGTTGTAGGTGAAACTGGCATCCCGCCTATCGGCGCATTAGGTAAGTTATCACAACTGAGTT TTTCGGTGATCAGCCCAGGAAATCTAACCACTAACTTGATGACTGCTAATGTCGCCAGTGGCGCTGCGGGTCAAGCGACA GATCTTCTCAACGACTTTAAGGCGGGTCAGTTACTTGGTACAAACCCTCGCCATCAAATGTTTGCTCAAGCAATGGGAAT TTTGGTTGGTTGTGTAACCAGCGCTGGGGTTTTCATGCTGTTAATTCCCAACCCTGCAGAACAGCTAATGACAGAGCAGT GGCCAGCGCCAGGCGTTGCAGCTTGGACAGCCATAGCCCAGGCATTGACTCAAGGGTTAGAGGCCATCCCTCAGTCGGCA CGATATGCGATGTTTATCGGCATCGTGGTCGCGACGCTCAATGAACTTATGCTATTGGTAGTCAAACCCAAATGGCATCC TTACCTGCCAAGTATGTCAGCCATGGGATTGGCATTCGTACTGCCTGCTCAAGTCAGCATTATGTTGTGCATTGGTGCTT TACTGGCTTGGGTATTAAGACAACTGGCTCCTCGCTGGTCAAAACGATTCTTAATCGCCCTAGCGGCAGGCTGCATAGCC GGAGAGAGTATCGCCGGCGTATTAGGTTCACTGCTATTTATGATTAAGCCCTAA
Upstream 100 bases:
>100_bases TCAATTACCATTGAACTCTAATACCAAAATAAAACAATTTTTATATTATTCAAATTCTGCTTATTAACATTAATCAGAAT TTAATGACCCTACTAGTAAC
Downstream 100 bases:
>100_bases ACAGCCCCAAGGCTCTCACTTAAATCATTGCTTTAACACTGGTAGATTGAGTTCCTCGTTAAGATAAACCTCAATGCGTC GATTTTGTTCTGGGATATGG
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: Oligopeptide Transporter OPT Superfamily; OPT Superfamily Oligopeptide Transporter; Oligopeptide Transporter Opt Superfamily Protein; Oligopeptide Transporter OPT Family; Integral Membrane Protein; Oligopeptide Transporter Opt Family
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA GESIAGVLGSLLFMIKP
Sequences:
>Translated_577_residues MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA GESIAGVLGSLLFMIKP >Mature_577_residues MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA GESIAGVLGSLLFMIKP
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321324, Length=491, Percent_Identity=24.4399185336049, Blast_Score=103, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61269; Mature: 61269
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00094 C5_MTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC GATIPCRAWSPREANIQQTAASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISIS CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH LLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGARIARHKTLALLSAMAVTIAHR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKK HHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARITLMWGWQEYLLLSVLTPILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGI EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQATDLLNDFKAGQLLGTNPRHQM CCCCCCCCHHHCEEEEECCCCCEEHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH FAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLR HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAPRWSKRFLIALAAGCIAGESIAGVLGSLLFMIKP HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC GATIPCRAWSPREANIQQTAASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISIS CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH LLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGARIARHKTLALLSAMAVTIAHR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKK HHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARITLMWGWQEYLLLSVLTPILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGI EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQATDLLNDFKAGQLLGTNPRHQM CCCCCCCCHHHCEEEEECCCCCEEHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH FAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLR HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAPRWSKRFLIALAAGCIAGESIAGVLGSLLFMIKP HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA