Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963678

Identifier: 157963678

GI number: 157963678

Start: 4700246

End: 4701979

Strand: Direct

Name: 157963678

Synonym: Spea_3867

Alternate gene names: NA

Gene position: 4700246-4701979 (Clockwise)

Preceding gene: 157963676

Following gene: 157963684

Centisome position: 90.83

GC content: 49.54

Gene sequence:

>1734_bases
ATGATGCCCAATACACCTCAAATTAGCTCTCCTCCATTATCTATACGCGCGATAGTTACAGGCATGATCCTAGGCAGCAT
TCTGGTTCTGTGTAATCTATACATGGGGCTGCGTATTGGCTGGTCAATCAATATGTCGGTACTGGCATCCTTGCTCGGTT
TTATTGCTTGGAAGGGGATCGGTGCGACTATCCCTTGCCGTGCTTGGAGCCCCCGTGAAGCAAACATACAGCAAACGGCG
GCCTCTGCCGCGGGAGGCACATTATCGGCAGGACTCGTATCCGCCATCCCCGCCTATATGATCCTCAGTGAGTCTGAGTT
TGATTATTGGCCGATGGTGATTTGGATGATAAGCATTAGCCTACTTGGGATCTGTGTCGCTTCAGCCATCAGACCCGCCA
TGTTACATAATGAGCGTTTACGTTTTCCCGCCGGGATAGCGACTGCTGAGGTCATTAATGATATGTTTAGTGGCGCACGC
ATTGCCCGCCATAAAACACTGGCATTACTATCGGCCATGGCCGTGACCATAGCACATCGCATCTTTATCCCTGTCAGCTA
CAAAATACCACTGGGGTTTTCCATACCAGGCCAGGGAGCGGTAGCTGGAAGCAGTATTAGCGCAAAAAACTTAGGCTTTA
TCATCGATCCCTCATACATGCTACTCGCTTTTGGCGCCATTATTGGAACCAAGTCGGCATTAAGCCTATTTGCAGGTGCA
CTCATCGCTTGGTTAGGACTAGGCCCCTATATTGTGGGACAAGGCTGGGAACAAGCAGGGCCTGCAGATGGTCATTGGTT
CAGTTACTTAATTGACTGGCTCGTTTGGCCCGGCGTAGCAATGATGCTCGCGTCCGCCGTTACCACTACCGCGATCTCAT
TATTTAAGTCACAGAAGAAAGCTAGAATTACCTTGATGTGGGGCTGGCAGGAGTATTTACTACTGTCAGTATTAACCCCG
ATCCTCATAGGTTTGCAAGTTTATCTATTCGATATTAGCTGGTTTGCGGCAATGCTGGCCGTGCCTTTAGCGTTTATATT
TGCAATCGTTGCAGCGCAAGTTGTAGGTGAAACTGGCATCCCGCCTATCGGCGCATTAGGTAAGTTATCACAACTGAGTT
TTTCGGTGATCAGCCCAGGAAATCTAACCACTAACTTGATGACTGCTAATGTCGCCAGTGGCGCTGCGGGTCAAGCGACA
GATCTTCTCAACGACTTTAAGGCGGGTCAGTTACTTGGTACAAACCCTCGCCATCAAATGTTTGCTCAAGCAATGGGAAT
TTTGGTTGGTTGTGTAACCAGCGCTGGGGTTTTCATGCTGTTAATTCCCAACCCTGCAGAACAGCTAATGACAGAGCAGT
GGCCAGCGCCAGGCGTTGCAGCTTGGACAGCCATAGCCCAGGCATTGACTCAAGGGTTAGAGGCCATCCCTCAGTCGGCA
CGATATGCGATGTTTATCGGCATCGTGGTCGCGACGCTCAATGAACTTATGCTATTGGTAGTCAAACCCAAATGGCATCC
TTACCTGCCAAGTATGTCAGCCATGGGATTGGCATTCGTACTGCCTGCTCAAGTCAGCATTATGTTGTGCATTGGTGCTT
TACTGGCTTGGGTATTAAGACAACTGGCTCCTCGCTGGTCAAAACGATTCTTAATCGCCCTAGCGGCAGGCTGCATAGCC
GGAGAGAGTATCGCCGGCGTATTAGGTTCACTGCTATTTATGATTAAGCCCTAA

Upstream 100 bases:

>100_bases
TCAATTACCATTGAACTCTAATACCAAAATAAAACAATTTTTATATTATTCAAATTCTGCTTATTAACATTAATCAGAAT
TTAATGACCCTACTAGTAAC

Downstream 100 bases:

>100_bases
ACAGCCCCAAGGCTCTCACTTAAATCATTGCTTTAACACTGGTAGATTGAGTTCCTCGTTAAGATAAACCTCAATGCGTC
GATTTTGTTCTGGGATATGG

Product: OPT family oligopeptide transporter

Products: NA

Alternate protein names: Oligopeptide Transporter OPT Superfamily; OPT Superfamily Oligopeptide Transporter; Oligopeptide Transporter Opt Superfamily Protein; Oligopeptide Transporter OPT Family; Integral Membrane Protein; Oligopeptide Transporter Opt Family

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA
ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR
IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA
LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP
ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT
DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA
RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA
GESIAGVLGSLLFMIKP

Sequences:

>Translated_577_residues
MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA
ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR
IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA
LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP
ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT
DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA
RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA
GESIAGVLGSLLFMIKP
>Mature_577_residues
MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGIGATIPCRAWSPREANIQQTA
ASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISISLLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGAR
IARHKTLALLSAMAVTIAHRIFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA
LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKKARITLMWGWQEYLLLSVLTP
ILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGIPPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQAT
DLLNDFKAGQLLGTNPRHQMFAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA
RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLRQLAPRWSKRFLIALAAGCIA
GESIAGVLGSLLFMIKP

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321324, Length=491, Percent_Identity=24.4399185336049, Blast_Score=103, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61269; Mature: 61269

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00094 C5_MTASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC
GATIPCRAWSPREANIQQTAASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISIS
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
LLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGARIARHKTLALLSAMAVTIAHR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA
HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH
LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKK
HHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ARITLMWGWQEYLLLSVLTPILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGI
EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQATDLLNDFKAGQLLGTNPRHQM
CCCCCCCCHHHCEEEEECCCCCEEHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
FAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLR
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAPRWSKRFLIALAAGCIAGESIAGVLGSLLFMIKP
HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMPNTPQISSPPLSIRAIVTGMILGSILVLCNLYMGLRIGWSINMSVLASLLGFIAWKGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC
GATIPCRAWSPREANIQQTAASAAGGTLSAGLVSAIPAYMILSESEFDYWPMVIWMISIS
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
LLGICVASAIRPAMLHNERLRFPAGIATAEVINDMFSGARIARHKTLALLSAMAVTIAHR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IFIPVSYKIPLGFSIPGQGAVAGSSISAKNLGFIIDPSYMLLAFGAIIGTKSALSLFAGA
HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH
LIAWLGLGPYIVGQGWEQAGPADGHWFSYLIDWLVWPGVAMMLASAVTTTAISLFKSQKK
HHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ARITLMWGWQEYLLLSVLTPILIGLQVYLFDISWFAAMLAVPLAFIFAIVAAQVVGETGI
EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPIGALGKLSQLSFSVISPGNLTTNLMTANVASGAAGQATDLLNDFKAGQLLGTNPRHQM
CCCCCCCCHHHCEEEEECCCCCEEHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
FAQAMGILVGCVTSAGVFMLLIPNPAEQLMTEQWPAPGVAAWTAIAQALTQGLEAIPQSA
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RYAMFIGIVVATLNELMLLVVKPKWHPYLPSMSAMGLAFVLPAQVSIMLCIGALLAWVLR
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAPRWSKRFLIALAAGCIAGESIAGVLGSLLFMIKP
HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA