| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gmk [H]
Identifier: 157963688
GI number: 157963688
Start: 4723151
End: 4723783
Strand: Direct
Name: gmk [H]
Synonym: Spea_3877
Alternate gene names: 157963688
Gene position: 4723151-4723783 (Clockwise)
Preceding gene: 157963684
Following gene: 157963689
Centisome position: 91.28
GC content: 48.03
Gene sequence:
>633_bases ATGCAGCTAATGACCGCTCGCGGAAACCTATTTATCGTCTCGGCGCCAAGTGGCGCAGGTAAATCATCGCTTATTTCGGC CCTGTTACGAGACCAGCCTGTAGATATGCAAGTTTCAGTTTCGCACACCACAAGGCAGCCGCGTCCAGGTGAAGAGAATG GTCAGCACTATCACTTCGTTAATCAAGACGAGTTTAAGAGCTTAATTGCCGATGGCGCTTTTTTTGAGTGGGCAGAAGTA TTTGGTAACTATTATGGCACCTCTCGTGTCACGATTGAGCAAACACTCGCGCAAGGTATCGACGTCTTTCTCGATATCGA CTGGCAGGGTGCGCAGCAAGTTAAAGAGCTGATGCCTGAATCGATTGGCGTTTTCATTCTCCCGCCGTCAAAAACTGAGC TAGAACGCCGCCTAACAGGCCGCGGACAAGACACCGCTGAAGTGATTGCGGGCCGCATGGCACAGGCGGTTTCAGAGATG TCACACTACAATGAATATGACTTCGTTATTGTTAACGATGATTTCGACAAAGCATTAGCCGATTTATTAGCGATCATTCG CAGCCAAAGATTAACCTCTGCTAGCCAAATTCATACGCAGAATGGTATGATTAAAGATCTGTTGGCAGGCTAA
Upstream 100 bases:
>100_bases GCGACTAGCGCAAATATCACCCTAGGCTGTATAATGGCTCGCTTAACCTTTTTACCGTCCAGTTTAGCTAACAACAGCTC TATTGGCACAAACATCGGAT
Downstream 100 bases:
>100_bases CTGTCTTCATGTACAATTTTGCGTCATTTTTTCAATCGATAAAACACTGGAGTTTCCAAACATGGCTCGCGTAACTGTAG AAGATGCCGTAAACCAAATC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MQLMTARGNLFIVSAPSGAGKSSLISALLRDQPVDMQVSVSHTTRQPRPGEENGQHYHFVNQDEFKSLIADGAFFEWAEV FGNYYGTSRVTIEQTLAQGIDVFLDIDWQGAQQVKELMPESIGVFILPPSKTELERRLTGRGQDTAEVIAGRMAQAVSEM SHYNEYDFVIVNDDFDKALADLLAIIRSQRLTSASQIHTQNGMIKDLLAG
Sequences:
>Translated_210_residues MQLMTARGNLFIVSAPSGAGKSSLISALLRDQPVDMQVSVSHTTRQPRPGEENGQHYHFVNQDEFKSLIADGAFFEWAEV FGNYYGTSRVTIEQTLAQGIDVFLDIDWQGAQQVKELMPESIGVFILPPSKTELERRLTGRGQDTAEVIAGRMAQAVSEM SHYNEYDFVIVNDDFDKALADLLAIIRSQRLTSASQIHTQNGMIKDLLAG >Mature_210_residues MQLMTARGNLFIVSAPSGAGKSSLISALLRDQPVDMQVSVSHTTRQPRPGEENGQHYHFVNQDEFKSLIADGAFFEWAEV FGNYYGTSRVTIEQTLAQGIDVFLDIDWQGAQQVKELMPESIGVFILPPSKTELERRLTGRGQDTAEVIAGRMAQAVSEM SHYNEYDFVIVNDDFDKALADLLAIIRSQRLTSASQIHTQNGMIKDLLAG
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=174, Percent_Identity=43.1034482758621, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI226874833, Length=174, Percent_Identity=43.1034482758621, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI4504221, Length=174, Percent_Identity=43.1034482758621, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI38570142, Length=182, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI14780902, Length=199, Percent_Identity=30.1507537688442, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI21361598, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=32.4022346368715, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=32.4022346368715, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=32.4022346368715, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=32.4022346368715, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI186700629, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI186972120, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI186700627, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI52630447, Length=188, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI21389483, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI111154074, Length=163, Percent_Identity=30.0613496932515, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=205, Percent_Identity=68.780487804878, Blast_Score=295, Evalue=2e-81, Organism=Caenorhabditis elegans, GI193203132, Length=180, Percent_Identity=36.1111111111111, Blast_Score=134, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=36.1111111111111, Blast_Score=132, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17557440, Length=184, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984092, Length=157, Percent_Identity=30.5732484076433, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71988041, Length=187, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71988048, Length=187, Percent_Identity=25.1336898395722, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=44.2622950819672, Blast_Score=155, Evalue=3e-39, Organism=Drosophila melanogaster, GI21356141, Length=183, Percent_Identity=40.4371584699454, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI85816106, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551002, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI85724806, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554481, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554489, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI85816281, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007136, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640542, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161077626, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23295; Mature: 23295
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLMTARGNLFIVSAPSGAGKSSLISALLRDQPVDMQVSVSHTTRQPRPGEENGQHYHFV CCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEC NQDEFKSLIADGAFFEWAEVFGNYYGTSRVTIEQTLAQGIDVFLDIDWQGAQQVKELMPE CHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCEEEEECCCCCHHHHHHHCHH SIGVFILPPSKTELERRLTGRGQDTAEVIAGRMAQAVSEMSHYNEYDFVIVNDDFDKALA HCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH DLLAIIRSQRLTSASQIHTQNGMIKDLLAG HHHHHHHHHHCCHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MQLMTARGNLFIVSAPSGAGKSSLISALLRDQPVDMQVSVSHTTRQPRPGEENGQHYHFV CCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEC NQDEFKSLIADGAFFEWAEVFGNYYGTSRVTIEQTLAQGIDVFLDIDWQGAQQVKELMPE CHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCEEEEECCCCCHHHHHHHCHH SIGVFILPPSKTELERRLTGRGQDTAEVIAGRMAQAVSEMSHYNEYDFVIVNDDFDKALA HCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH DLLAIIRSQRLTSASQIHTQNGMIKDLLAG HHHHHHHHHHCCHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]