Click here to switch to the map view.

The map label for this gene is 157963660

Identifier: 157963660

GI number: 157963660

Start: 4675864

End: 4677174

Strand: Reverse

Name: 157963660

Synonym: Spea_3849

Alternate gene names: NA

Gene position: 4677174-4675864 (Counterclockwise)

Preceding gene: 157963663

Following gene: 157963658

Centisome position: 90.39

GC content: 41.72

Gene sequence:

>1311_bases
GTGATTAACATAGTGGAAATTCAAATTGGTGTAGTACTCAGATATAAGAAACCTTCTTGCGCTGTAAATATGTATGAGGA
TGGTCATCTTAATTTTCATTTCCTGACAAAGCATTCAGAAGCTAATAATCTCCAACTTGAGAAAGGAATTAATCCTTCAG
CTAAGATAAAAACTAACTCTGGTGAGCTTGTTCGTTCTGCTATCTTGGTTTCTAGTAGTCCGAATAAGAAAGGTTCTATT
GAGACACCGTGGGAAGATTTCTACGATGTCGATAATGGTCATATTCGCTATTTTGGTGACAACAAAGAACCCGGTAAAGA
CCCTGCTACAGCCCCGGGAAACAAGGCGCTTCTCGAAGCCTTTCGATTAGCTCATTCTCACTCAGCTGAAGAAAGGGCAT
TAACTCCTCCAATATTGTTCTTTAAACGTGCTGTGATTAACGGTGTAGCTAAAGGCTATCCACAATTCTATGGACTTGGG
ATCATCAATAGCGTCGAACTCGTGACTCAATGGGATAATAAGTTAGCGCGCACATTTACTAATTATGCTTTCGACTTCAC
AGTGCTTTGCATCGCTAGTGAGCATGAGGAGTTTGAGTGGGATTGGATTAATAGCCGGCGTAAGAAAGGATTTTCGCTAT
CTATTACCAATAAAGCATCCCCTAAAAGTTGGCGTCAATGGCTTATTGAGGGAAGTAATTCACTTAATAAGCTGCGCCGC
CGTGTTTCTAAACTCAGTCTTGAAAAGACAGTTAACCAGAAACCTATTCCGGGTTCTGAATCCGATCGTATTCTGAATGA
AATCTATATCTATTACGCCAACAAAAAACACCGGTTCGAGGCGCTTGCTGAAGTAATCGCCGCGCGGGTGATAGATCGTG
AGTTCGGTATATATCATAAAGGCTGGGTGACTCAAGGCTCTAGTGATGGCGGCGCAGACTTTGTCGGTAAGGTGACTTTA
GGCAGTGGCTTTTCAAAAGTTGAATTGATTGTTTTAGGGCAAGCTAAGTGTGAGGCATTAAATAGTCCAACGGGAGGCAA
TCATATTGCCCGAACAGTTGCCCGCCTAAAGCGTGGCTGGCTAGGTGTATATGTTACTACTAGTTATTTCTCTGACTCTG
TTCAGCGTGAAGTGATTGAAGATAAGTATCCAATCATTTTGATCCATGGGCGAAGAATTGCTGAAGAGGTGGCTAAAATT
GTCTATGAAAGTGAAGAGTTTGAGAGTGTGAATAGCTTTTTAGTCGCGATGGATAAAGACTATCCAACGCGCCTGAAACA
AAGACAAGCTGAAGAAGTTTTGAATATTTAG

Upstream 100 bases:

>100_bases
ATAATATCAAACCAATGAGACAAATTGTTGAATAGTCCATTAATATCATTATCTTATGTTTGCCACTGTGCTAGTGTAGG
CCCTAAGGGAATGAATTTGG

Downstream 100 bases:

>100_bases
TTTGTTTTTATTACGTTGAATTTACAGCCTTACTTTATGGCTGTTTTGCCAACAAAAAGCCCAGCATTTAGCTGGGCTCT
TGTTATATTTTACTATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Restriction Endonuclease Superfamily Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MINIVEIQIGVVLRYKKPSCAVNMYEDGHLNFHFLTKHSEANNLQLEKGINPSAKIKTNSGELVRSAILVSSSPNKKGSI
ETPWEDFYDVDNGHIRYFGDNKEPGKDPATAPGNKALLEAFRLAHSHSAEERALTPPILFFKRAVINGVAKGYPQFYGLG
IINSVELVTQWDNKLARTFTNYAFDFTVLCIASEHEEFEWDWINSRRKKGFSLSITNKASPKSWRQWLIEGSNSLNKLRR
RVSKLSLEKTVNQKPIPGSESDRILNEIYIYYANKKHRFEALAEVIAARVIDREFGIYHKGWVTQGSSDGGADFVGKVTL
GSGFSKVELIVLGQAKCEALNSPTGGNHIARTVARLKRGWLGVYVTTSYFSDSVQREVIEDKYPIILIHGRRIAEEVAKI
VYESEEFESVNSFLVAMDKDYPTRLKQRQAEEVLNI

Sequences:

>Translated_436_residues
MINIVEIQIGVVLRYKKPSCAVNMYEDGHLNFHFLTKHSEANNLQLEKGINPSAKIKTNSGELVRSAILVSSSPNKKGSI
ETPWEDFYDVDNGHIRYFGDNKEPGKDPATAPGNKALLEAFRLAHSHSAEERALTPPILFFKRAVINGVAKGYPQFYGLG
IINSVELVTQWDNKLARTFTNYAFDFTVLCIASEHEEFEWDWINSRRKKGFSLSITNKASPKSWRQWLIEGSNSLNKLRR
RVSKLSLEKTVNQKPIPGSESDRILNEIYIYYANKKHRFEALAEVIAARVIDREFGIYHKGWVTQGSSDGGADFVGKVTL
GSGFSKVELIVLGQAKCEALNSPTGGNHIARTVARLKRGWLGVYVTTSYFSDSVQREVIEDKYPIILIHGRRIAEEVAKI
VYESEEFESVNSFLVAMDKDYPTRLKQRQAEEVLNI
>Mature_436_residues
MINIVEIQIGVVLRYKKPSCAVNMYEDGHLNFHFLTKHSEANNLQLEKGINPSAKIKTNSGELVRSAILVSSSPNKKGSI
ETPWEDFYDVDNGHIRYFGDNKEPGKDPATAPGNKALLEAFRLAHSHSAEERALTPPILFFKRAVINGVAKGYPQFYGLG
IINSVELVTQWDNKLARTFTNYAFDFTVLCIASEHEEFEWDWINSRRKKGFSLSITNKASPKSWRQWLIEGSNSLNKLRR
RVSKLSLEKTVNQKPIPGSESDRILNEIYIYYANKKHRFEALAEVIAARVIDREFGIYHKGWVTQGSSDGGADFVGKVTL
GSGFSKVELIVLGQAKCEALNSPTGGNHIARTVARLKRGWLGVYVTTSYFSDSVQREVIEDKYPIILIHGRRIAEEVAKI
VYESEEFESVNSFLVAMDKDYPTRLKQRQAEEVLNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49251; Mature: 49251

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIVEIQIGVVLRYKKPSCAVNMYEDGHLNFHFLTKHSEANNLQLEKGINPSAKIKTNS
CEEEEEEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCCEEECCC
GELVRSAILVSSSPNKKGSIETPWEDFYDVDNGHIRYFGDNKEPGKDPATAPGNKALLEA
HHHHHHEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
FRLAHSHSAEERALTPPILFFKRAVINGVAKGYPQFYGLGIINSVELVTQWDNKLARTFT
HHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHH
NYAFDFTVLCIASEHEEFEWDWINSRRKKGFSLSITNKASPKSWRQWLIEGSNSLNKLRR
HHCEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH
RVSKLSLEKTVNQKPIPGSESDRILNEIYIYYANKKHRFEALAEVIAARVIDREFGIYHK
HHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEC
GWVTQGSSDGGADFVGKVTLGSGFSKVELIVLGQAKCEALNSPTGGNHIARTVARLKRGW
CCEECCCCCCCCCEEEEEEECCCCCEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHCCC
LGVYVTTSYFSDSVQREVIEDKYPIILIHGRRIAEEVAKIVYESEEFESVNSFLVAMDKD
EEEEEEECHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHEEEEECCC
YPTRLKQRQAEEVLNI
CHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINIVEIQIGVVLRYKKPSCAVNMYEDGHLNFHFLTKHSEANNLQLEKGINPSAKIKTNS
CEEEEEEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCCEEECCC
GELVRSAILVSSSPNKKGSIETPWEDFYDVDNGHIRYFGDNKEPGKDPATAPGNKALLEA
HHHHHHEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
FRLAHSHSAEERALTPPILFFKRAVINGVAKGYPQFYGLGIINSVELVTQWDNKLARTFT
HHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHH
NYAFDFTVLCIASEHEEFEWDWINSRRKKGFSLSITNKASPKSWRQWLIEGSNSLNKLRR
HHCEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH
RVSKLSLEKTVNQKPIPGSESDRILNEIYIYYANKKHRFEALAEVIAARVIDREFGIYHK
HHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEC
GWVTQGSSDGGADFVGKVTLGSGFSKVELIVLGQAKCEALNSPTGGNHIARTVARLKRGW
CCEECCCCCCCCCEEEEEEECCCCCEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHCCC
LGVYVTTSYFSDSVQREVIEDKYPIILIHGRRIAEEVAKIVYESEEFESVNSFLVAMDKD
EEEEEEECHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHEEEEECCC
YPTRLKQRQAEEVLNI
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA