| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963663
Identifier: 157963663
GI number: 157963663
Start: 4680141
End: 4683110
Strand: Reverse
Name: 157963663
Synonym: Spea_3852
Alternate gene names: NA
Gene position: 4683110-4680141 (Counterclockwise)
Preceding gene: 157963664
Following gene: 157963660
Centisome position: 90.5
GC content: 41.04
Gene sequence:
>2970_bases ATGATTTCCTCCTACCGAACTGCGCTATTTTTATTCACTTCTTTACTGCTAACAGGCTGTCCATCAGACAGTTCTACCCC TGACAATATACCGCCAGAAATTCAGCTATTAGTTGAGAAAACTGAGTATCAGGAAGGTGAGGTTATATCTTTAGCTGCAT TAGCTTCTGATAAAGATGGTGATGATTTTCAGGTTTCTTGGCTTTTAGTAGATGCTCCATCTCAAGTCACGCTTGAAAAA CTCAGTGATTATGAAGTTCGGCTTGTTGTTACAGCCCCATTAGAACAGGGGGTACTTGTTACCGTTCAGGTCAGTGTGTC TGATGGAAGTAGTGAAGTCTCCTTACAAACTCAAATATCAATTACTCAAAACCTTGCGCCGCAAATTAGCTACGATGCTG ATGCATACAGCTTCCAGTTAGGTGAAGATCTGAGCTTTCCTGTTACGATTACTGATAGCGACAGTGATGACTTATATATC TTATGGGAATTAAAAGATTCACCTGAAGGTTATGATATTTCAAGTAGTGACGGTGGCGTACAGCTAACAGCGCCCATCTA TATTGAAGAGAGTGTAAGTTTAACCGCCGTACTTCAAGTCAGTGATGGGTATAACGCGCAGACAAAAGAATTCTTGGTCA TTATTAAACCTAATCTTGTACCATTAATCACTGCAGAGACTGAAAGTTACAGCTTCCAGTTAGGTGAAGATCTGAGCTTC CCTGTTACTGTTTCCGATAGCGACAGCGATAGCTTAGAAATTTCATGGACGCTTAAGGATTCTGCCGATGGGTTTGGAGT TTCAAGTTCGAATGGTGTAGTGCAGCTAACGACGCCTTCCTCTATTGCAGAGAGTGTCAGCTTGACTGTTCAGCTTCAAG TCAGTGATGGTTATAACGCACTGGAGAAAGAGTTTGCTATAACGCTGTTACCTAGAGATATTGTTGAGGTTACTCTCGTT TACCCACCTGCCAGCGCAATAACCGATGCGAGATCAACTGTAATCAGAGGGATCAGCTCATTTGAGCTATCGAGCTTAAT GGTTAATGGAGAAGCAGTTACTAGCTCTGATAACTTTCTTAACTGGACCGTCACGCTACCGATTGCCGAGCTAGAAACGC TAGAAATAACTCCTGAAACGAGCGTACTGCCAACCCAAACGCTTGAATACAAGAATTTTGAAAGAACAATTAAGCATACT AAGCCATTCATTTTGGAAAATGAGAGTCTCACTGCCTTTGGTGATCATGTTTACCTTATTAATGACAGCAGCAAGCAGAT TATTCAGCATAACCTAGTGACAGATGAGCGAAGCATCATTTTTCAAGCTACAGCAGATTTCGATTTTGAACCTGAACAGG CCGTTGTCGATGAAGCCAGCAACCGATTAGTGATAGCAGGGACTTTAGAGACGGCTGTTGAGACATACGGATTAACAGTG GTGGCATTAGATCTTGCAAGTTTTACAACTACCGTGCTGTTCCAAGATCTGCGTTATGAGGCATTTAATTCCATTGTGTT TAATGGAGATAATAACAAGCTGCTTATTCCTGATTGGCACTCTGACGGTACTATTTTTGAAATTGACCTGACTACTGGGA TTAAGACTCAGCTATATGCGGCAAAGTCAGATTTTGGAATCGAGGTCGATAGGGGCTACGAGCTGCAATATCACAATGGT GACTTGCTCTGGGGAGATGTAGGCACGCCAAAGCTATATAAAATTGATCAAGTTAATGATCAGATGAGCATTATATGGCA GGGGAGTGATTATCAAGCTGATATCGACAGCTTGGACCTCTCTTTAAGGTTTTATAAAGACTTTATCTATGATGAACAGG GCAATAAACTGACGCTGATTATCGATGAGGGGGCGATTACCTTTGACCTTAACTTACAAATCGTCGAGAGTTTTGCCGAT TTTAGAAACCTAATATCCCCTTTTGAAGAAGTTGAAAGTGCACATGTTGCAGGTCGAGATGTGCATATTTGGGATGAAGG TGTACAGATGCTCATCACCTATAACTTAGATAGTGGGGCGTTTGTTGCGTCAGGTAATGACAGCGTCAATATTAACTTAT CTAGGTACCCTAGAAGCATTGCTTTATCGAGTGATGAAAAGTCGCTTTACTATAGCAGCGATGAGAGCCCTGCAATGTAT CGGTTCCCGATTGATGCAACCGATAATAGCCAGTTAGAAACAGTATTCGATCTATCCGTTAATAATGACATCGATGAGCA ACCTAACTTTTACTTTGAACAATACGTTACTGTAAACCCTGTTGAGTCCGGTTTTTACTTGACCAAAGATTATGACGCTG GAGGCCTGTACTTTTTTGAATTCGATACGCTGGATATTATCAATATTGCTTTAATTGAGGATATGCAGTCTGAGTTTGCT ATCGATTTTGACAAGAATTTAGCCTTCACCTTAACCGAAAATAATTACTATGACGGTGAAAACTGGATTGATGAGCTTTT CTGGAAAAAGATCAATCTTGATAGTGGCGAAGTCACAGATTTTAGCAGTAATTTAGACTATATCGGCACAGAGTTTGAGT ATGATCGAATAGATTCATTGACTCTCAGCCCCGATGGTGAGGCACTCATTGTAGAAATGGATGATAACTTAGTTCAAATT TCTACCGGTGATGGAAGTTTAACTTGGTTCTCAAAAGACAAGTTGATGCCAAACTTATCATCAAACAGTATTGAAAGTCT TATCTGGGCGGGTAATGAGCTTATTGCCATCAATGGTAATGCTAATTCTGGGCTCTATAAAGTGGATCAATCAACGGGTG AATATACTGAGCTTTCAGGCAAGTTTGTTGGTAGCGGCGCAACGCCATTTGATTTTGATACCGGCGTATACTCTGGTGCT CTTCAGCAATTTTTTATCGTTGATTATGATCTTGAAGCGATTTACGCCATCGATGAGCTGACCGGTGAGCGGTTAATCAT TCATAAGTAA
Upstream 100 bases:
>100_bases ACAGACTCAGTTTTACCAAAAACTGAAGAGTTTTTTGATGTAGATCATTGTTTTGTTGTGATACCTTTGTTTGGGAAATG TAAATAACAAAGGGGTCACA
Downstream 100 bases:
>100_bases AACAGCAAGAGTGAAAACATAGAAAACAAAATGGCCGCTAATAGCGGCCATTTTTATGCCTACAGCGAGGCGGTGTCAAT ATCACCCAGATGATGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 989; Mature: 989
Protein sequence:
>989_residues MISSYRTALFLFTSLLLTGCPSDSSTPDNIPPEIQLLVEKTEYQEGEVISLAALASDKDGDDFQVSWLLVDAPSQVTLEK LSDYEVRLVVTAPLEQGVLVTVQVSVSDGSSEVSLQTQISITQNLAPQISYDADAYSFQLGEDLSFPVTITDSDSDDLYI LWELKDSPEGYDISSSDGGVQLTAPIYIEESVSLTAVLQVSDGYNAQTKEFLVIIKPNLVPLITAETESYSFQLGEDLSF PVTVSDSDSDSLEISWTLKDSADGFGVSSSNGVVQLTTPSSIAESVSLTVQLQVSDGYNALEKEFAITLLPRDIVEVTLV YPPASAITDARSTVIRGISSFELSSLMVNGEAVTSSDNFLNWTVTLPIAELETLEITPETSVLPTQTLEYKNFERTIKHT KPFILENESLTAFGDHVYLINDSSKQIIQHNLVTDERSIIFQATADFDFEPEQAVVDEASNRLVIAGTLETAVETYGLTV VALDLASFTTTVLFQDLRYEAFNSIVFNGDNNKLLIPDWHSDGTIFEIDLTTGIKTQLYAAKSDFGIEVDRGYELQYHNG DLLWGDVGTPKLYKIDQVNDQMSIIWQGSDYQADIDSLDLSLRFYKDFIYDEQGNKLTLIIDEGAITFDLNLQIVESFAD FRNLISPFEEVESAHVAGRDVHIWDEGVQMLITYNLDSGAFVASGNDSVNINLSRYPRSIALSSDEKSLYYSSDESPAMY RFPIDATDNSQLETVFDLSVNNDIDEQPNFYFEQYVTVNPVESGFYLTKDYDAGGLYFFEFDTLDIINIALIEDMQSEFA IDFDKNLAFTLTENNYYDGENWIDELFWKKINLDSGEVTDFSSNLDYIGTEFEYDRIDSLTLSPDGEALIVEMDDNLVQI STGDGSLTWFSKDKLMPNLSSNSIESLIWAGNELIAINGNANSGLYKVDQSTGEYTELSGKFVGSGATPFDFDTGVYSGA LQQFFIVDYDLEAIYAIDELTGERLIIHK
Sequences:
>Translated_989_residues MISSYRTALFLFTSLLLTGCPSDSSTPDNIPPEIQLLVEKTEYQEGEVISLAALASDKDGDDFQVSWLLVDAPSQVTLEK LSDYEVRLVVTAPLEQGVLVTVQVSVSDGSSEVSLQTQISITQNLAPQISYDADAYSFQLGEDLSFPVTITDSDSDDLYI LWELKDSPEGYDISSSDGGVQLTAPIYIEESVSLTAVLQVSDGYNAQTKEFLVIIKPNLVPLITAETESYSFQLGEDLSF PVTVSDSDSDSLEISWTLKDSADGFGVSSSNGVVQLTTPSSIAESVSLTVQLQVSDGYNALEKEFAITLLPRDIVEVTLV YPPASAITDARSTVIRGISSFELSSLMVNGEAVTSSDNFLNWTVTLPIAELETLEITPETSVLPTQTLEYKNFERTIKHT KPFILENESLTAFGDHVYLINDSSKQIIQHNLVTDERSIIFQATADFDFEPEQAVVDEASNRLVIAGTLETAVETYGLTV VALDLASFTTTVLFQDLRYEAFNSIVFNGDNNKLLIPDWHSDGTIFEIDLTTGIKTQLYAAKSDFGIEVDRGYELQYHNG DLLWGDVGTPKLYKIDQVNDQMSIIWQGSDYQADIDSLDLSLRFYKDFIYDEQGNKLTLIIDEGAITFDLNLQIVESFAD FRNLISPFEEVESAHVAGRDVHIWDEGVQMLITYNLDSGAFVASGNDSVNINLSRYPRSIALSSDEKSLYYSSDESPAMY RFPIDATDNSQLETVFDLSVNNDIDEQPNFYFEQYVTVNPVESGFYLTKDYDAGGLYFFEFDTLDIINIALIEDMQSEFA IDFDKNLAFTLTENNYYDGENWIDELFWKKINLDSGEVTDFSSNLDYIGTEFEYDRIDSLTLSPDGEALIVEMDDNLVQI STGDGSLTWFSKDKLMPNLSSNSIESLIWAGNELIAINGNANSGLYKVDQSTGEYTELSGKFVGSGATPFDFDTGVYSGA LQQFFIVDYDLEAIYAIDELTGERLIIHK >Mature_989_residues MISSYRTALFLFTSLLLTGCPSDSSTPDNIPPEIQLLVEKTEYQEGEVISLAALASDKDGDDFQVSWLLVDAPSQVTLEK LSDYEVRLVVTAPLEQGVLVTVQVSVSDGSSEVSLQTQISITQNLAPQISYDADAYSFQLGEDLSFPVTITDSDSDDLYI LWELKDSPEGYDISSSDGGVQLTAPIYIEESVSLTAVLQVSDGYNAQTKEFLVIIKPNLVPLITAETESYSFQLGEDLSF PVTVSDSDSDSLEISWTLKDSADGFGVSSSNGVVQLTTPSSIAESVSLTVQLQVSDGYNALEKEFAITLLPRDIVEVTLV YPPASAITDARSTVIRGISSFELSSLMVNGEAVTSSDNFLNWTVTLPIAELETLEITPETSVLPTQTLEYKNFERTIKHT KPFILENESLTAFGDHVYLINDSSKQIIQHNLVTDERSIIFQATADFDFEPEQAVVDEASNRLVIAGTLETAVETYGLTV VALDLASFTTTVLFQDLRYEAFNSIVFNGDNNKLLIPDWHSDGTIFEIDLTTGIKTQLYAAKSDFGIEVDRGYELQYHNG DLLWGDVGTPKLYKIDQVNDQMSIIWQGSDYQADIDSLDLSLRFYKDFIYDEQGNKLTLIIDEGAITFDLNLQIVESFAD FRNLISPFEEVESAHVAGRDVHIWDEGVQMLITYNLDSGAFVASGNDSVNINLSRYPRSIALSSDEKSLYYSSDESPAMY RFPIDATDNSQLETVFDLSVNNDIDEQPNFYFEQYVTVNPVESGFYLTKDYDAGGLYFFEFDTLDIINIALIEDMQSEFA IDFDKNLAFTLTENNYYDGENWIDELFWKKINLDSGEVTDFSSNLDYIGTEFEYDRIDSLTLSPDGEALIVEMDDNLVQI STGDGSLTWFSKDKLMPNLSSNSIESLIWAGNELIAINGNANSGLYKVDQSTGEYTELSGKFVGSGATPFDFDTGVYSGA LQQFFIVDYDLEAIYAIDELTGERLIIHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 109773; Mature: 109773
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSYRTALFLFTSLLLTGCPSDSSTPDNIPPEIQLLVEKTEYQEGEVISLAALASDKDG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCC DDFQVSWLLVDAPSQVTLEKLSDYEVRLVVTAPLEQGVLVTVQVSVSDGSSEVSLQTQIS CCEEEEEEEEECCCCEEHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEE ITQNLAPQISYDADAYSFQLGEDLSFPVTITDSDSDDLYILWELKDSPEGYDISSSDGGV EECCCCCCEECCCCCEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEECCCCCCE QLTAPIYIEESVSLTAVLQVSDGYNAQTKEFLVIIKPNLVPLITAETESYSFQLGEDLSF EEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCC PVTVSDSDSDSLEISWTLKDSADGFGVSSSNGVVQLTTPSSIAESVSLTVQLQVSDGYNA EEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCEEEEEEEEECCCCCC LEKEFAITLLPRDIVEVTLVYPPASAITDARSTVIRGISSFELSSLMVNGEAVTSSDNFL CCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCEE NWTVTLPIAELETLEITPETSVLPTQTLEYKNFERTIKHTKPFILENESLTAFGDHVYLI EEEEEEEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHCCCCEEEECCCEEEECCEEEEE NDSSKQIIQHNLVTDERSIIFQATADFDFEPEQAVVDEASNRLVIAGTLETAVETYGLTV ECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCEEE VALDLASFTTTVLFQDLRYEAFNSIVFNGDNNKLLIPDWHSDGTIFEIDLTTGIKTQLYA EEEEHHHHHHHHHHHHHHHHEECEEEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEE AKSDFGIEVDRGYELQYHNGDLLWGDVGTPKLYKIDQVNDQMSIIWQGSDYQADIDSLDL ECCCCCEEECCCEEEEEECCCEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEE SLRFYKDFIYDEQGNKLTLIIDEGAITFDLNLQIVESFADFRNLISPFEEVESAHVAGRD EEEEEEHHHCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VHIWDEGVQMLITYNLDSGAFVASGNDSVNINLSRYPRSIALSSDEKSLYYSSDESPAMY EEEECCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCEEEECCCCCEEEECCCCCCEEE RFPIDATDNSQLETVFDLSVNNDIDEQPNFYFEQYVTVNPVESGFYLTKDYDAGGLYFFE EEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEE FDTLDIINIALIEDMQSEFAIDFDKNLAFTLTENNYYDGENWIDELFWKKINLDSGEVTD ECCEEEEEEEEEHHCHHHEEEEECCCEEEEEECCCEECCHHHHHHHHHEEECCCCCCCEE FSSNLDYIGTEFEYDRIDSLTLSPDGEALIVEMDDNLVQISTGDGSLTWFSKDKLMPNLS ECCCCCEECCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCC SNSIESLIWAGNELIAINGNANSGLYKVDQSTGEYTELSGKFVGSGATPFDFDTGVYSGA CCCHHHHEECCCEEEEEECCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCCCHHHCC LQQFFIVDYDLEAIYAIDELTGERLIIHK CEEEEEEEECCEEEEEEECCCCCEEEEEC >Mature Secondary Structure MISSYRTALFLFTSLLLTGCPSDSSTPDNIPPEIQLLVEKTEYQEGEVISLAALASDKDG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCC DDFQVSWLLVDAPSQVTLEKLSDYEVRLVVTAPLEQGVLVTVQVSVSDGSSEVSLQTQIS CCEEEEEEEEECCCCEEHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEE ITQNLAPQISYDADAYSFQLGEDLSFPVTITDSDSDDLYILWELKDSPEGYDISSSDGGV EECCCCCCEECCCCCEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEECCCCCCE QLTAPIYIEESVSLTAVLQVSDGYNAQTKEFLVIIKPNLVPLITAETESYSFQLGEDLSF EEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCC PVTVSDSDSDSLEISWTLKDSADGFGVSSSNGVVQLTTPSSIAESVSLTVQLQVSDGYNA EEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCCEEEEEEEEECCCCCC LEKEFAITLLPRDIVEVTLVYPPASAITDARSTVIRGISSFELSSLMVNGEAVTSSDNFL CCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCEE NWTVTLPIAELETLEITPETSVLPTQTLEYKNFERTIKHTKPFILENESLTAFGDHVYLI EEEEEEEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHCCCCEEEECCCEEEECCEEEEE NDSSKQIIQHNLVTDERSIIFQATADFDFEPEQAVVDEASNRLVIAGTLETAVETYGLTV ECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCEEE VALDLASFTTTVLFQDLRYEAFNSIVFNGDNNKLLIPDWHSDGTIFEIDLTTGIKTQLYA EEEEHHHHHHHHHHHHHHHHEECEEEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEE AKSDFGIEVDRGYELQYHNGDLLWGDVGTPKLYKIDQVNDQMSIIWQGSDYQADIDSLDL ECCCCCEEECCCEEEEEECCCEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEE SLRFYKDFIYDEQGNKLTLIIDEGAITFDLNLQIVESFADFRNLISPFEEVESAHVAGRD EEEEEEHHHCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VHIWDEGVQMLITYNLDSGAFVASGNDSVNINLSRYPRSIALSSDEKSLYYSSDESPAMY EEEECCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCEEEECCCCCEEEECCCCCCEEE RFPIDATDNSQLETVFDLSVNNDIDEQPNFYFEQYVTVNPVESGFYLTKDYDAGGLYFFE EEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEE FDTLDIINIALIEDMQSEFAIDFDKNLAFTLTENNYYDGENWIDELFWKKINLDSGEVTD ECCEEEEEEEEEHHCHHHEEEEECCCEEEEEECCCEECCHHHHHHHHHEEECCCCCCCEE FSSNLDYIGTEFEYDRIDSLTLSPDGEALIVEMDDNLVQISTGDGSLTWFSKDKLMPNLS ECCCCCEECCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCC SNSIESLIWAGNELIAINGNANSGLYKVDQSTGEYTELSGKFVGSGATPFDFDTGVYSGA CCCHHHHEECCCEEEEEECCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCCCHHHCC LQQFFIVDYDLEAIYAIDELTGERLIIHK CEEEEEEEECCEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA