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The map label for this gene is yicC [H]

Identifier: 157963656

GI number: 157963656

Start: 4672541

End: 4673404

Strand: Direct

Name: yicC [H]

Synonym: Spea_3845

Alternate gene names: 157963656

Gene position: 4672541-4673404 (Clockwise)

Preceding gene: 157963653

Following gene: 157963659

Centisome position: 90.3

GC content: 48.96

Gene sequence:

>864_bases
ATGATCCAAAGCATGACAGCCTACGCTCGTATCGAGCACAAAGCAGATTGGGGCACCGCCTCTTGGGAAATCCGTTCAGT
TAATCAGCGTTACTTAGAAACCTATTTACGCCTACCAGAACATTTCCGCAGCTTGGAGCCTGTTCTTAGAGATCGTCTAC
GTAAACGCCTAAACCGCGGTAAAGTCGAAGTAAACCTTCGCTATGACCTAAATGAAAAGAACGACAGCGAGTTACAGCTA
AACCAAGATCTAGCTAAGCAGATTATCAATGCCGCTAACTGGGTGAAGAACGAAGCCGGCCAAGGCGAACTCAACGTGGT
TGACGTACTGCGCTGGCCAGGTGTGATGTCAGGCTCAGAGCAAGACATGGATGCATTAGGTAAAGAGCTATTAAGCGCAT
TTGACGGCGCAATAGATCAATTTATCGAAGCTCGTGGCCGTGAAGGCGATGCGATTAACACCATGCTACAAACACGTCTT
GACCAAATCGTTGAGCAGGTCACCATCGTTCGTGGCCACATGCCAACCGTTATGCAATGGCAGCGTGACAAGCTAACCAA
CCGTTTAGCCGAAATCACTGGTGAACTAGACCCTGCTCGTATGGAGCAAGAGATGGTACTACTCGCGCAGAAGATGGATG
TTGCCGAAGAGATGGATCGCCTCGATGCACACGTAGCTGAAACGCGCCGCATTCTAAAGCAAGGTGGCGCACAAGGTCGC
CGTCTAGACTTTATGATGCAAGAGTTTAACCGTGAGTCAAACACCCTAGCCTCTAAGTCAATCAGTGCCGAAGTCACCTC
TGCAGCAGTTGAGCTTAAAGTACTTATCGAGCAGATGCGTGAGCAAATTCAGAACGTGGAATAA

Upstream 100 bases:

>100_bases
TCACCACTGCATGAGCAAAATTACCACTAAAGCCTGCACCTTAAATTTGTTTGGGTATATAATCACAACTCACTTAGACG
AATCACACTGGAAATCATCC

Downstream 100 bases:

>100_bases
GATTTTTATCGATTTGAATTAGCCTGTCCAAGCCCAGTTTATCACTGGGCTTTTGTTTGCCTTTTGGAGTTAACCTTATT
CTTTAGCTACAAAGTTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIQSMTAYARIEHKADWGTASWEIRSVNQRYLETYLRLPEHFRSLEPVLRDRLRKRLNRGKVEVNLRYDLNEKNDSELQL
NQDLAKQIINAANWVKNEAGQGELNVVDVLRWPGVMSGSEQDMDALGKELLSAFDGAIDQFIEARGREGDAINTMLQTRL
DQIVEQVTIVRGHMPTVMQWQRDKLTNRLAEITGELDPARMEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKQGGAQGR
RLDFMMQEFNRESNTLASKSISAEVTSAAVELKVLIEQMREQIQNVE

Sequences:

>Translated_287_residues
MIQSMTAYARIEHKADWGTASWEIRSVNQRYLETYLRLPEHFRSLEPVLRDRLRKRLNRGKVEVNLRYDLNEKNDSELQL
NQDLAKQIINAANWVKNEAGQGELNVVDVLRWPGVMSGSEQDMDALGKELLSAFDGAIDQFIEARGREGDAINTMLQTRL
DQIVEQVTIVRGHMPTVMQWQRDKLTNRLAEITGELDPARMEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKQGGAQGR
RLDFMMQEFNRESNTLASKSISAEVTSAAVELKVLIEQMREQIQNVE
>Mature_287_residues
MIQSMTAYARIEHKADWGTASWEIRSVNQRYLETYLRLPEHFRSLEPVLRDRLRKRLNRGKVEVNLRYDLNEKNDSELQL
NQDLAKQIINAANWVKNEAGQGELNVVDVLRWPGVMSGSEQDMDALGKELLSAFDGAIDQFIEARGREGDAINTMLQTRL
DQIVEQVTIVRGHMPTVMQWQRDKLTNRLAEITGELDPARMEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKQGGAQGR
RLDFMMQEFNRESNTLASKSISAEVTSAAVELKVLIEQMREQIQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=62.7177700348432, Blast_Score=366, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33008; Mature: 33008

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSMTAYARIEHKADWGTASWEIRSVNQRYLETYLRLPEHFRSLEPVLRDRLRKRLNRG
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KVEVNLRYDLNEKNDSELQLNQDLAKQIINAANWVKNEAGQGELNVVDVLRWPGVMSGSE
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCH
QDMDALGKELLSAFDGAIDQFIEARGREGDAINTMLQTRLDQIVEQVTIVRGHMPTVMQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QRDKLTNRLAEITGELDPARMEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKQGGAQGR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLDFMMQEFNRESNTLASKSISAEVTSAAVELKVLIEQMREQIQNVE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQSMTAYARIEHKADWGTASWEIRSVNQRYLETYLRLPEHFRSLEPVLRDRLRKRLNRG
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KVEVNLRYDLNEKNDSELQLNQDLAKQIINAANWVKNEAGQGELNVVDVLRWPGVMSGSE
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCH
QDMDALGKELLSAFDGAIDQFIEARGREGDAINTMLQTRLDQIVEQVTIVRGHMPTVMQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QRDKLTNRLAEITGELDPARMEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKQGGAQGR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLDFMMQEFNRESNTLASKSISAEVTSAAVELKVLIEQMREQIQNVE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]