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The map label for this gene is yicC [H]

Identifier: 157963659

GI number: 157963659

Start: 4675467

End: 4675730

Strand: Direct

Name: yicC [H]

Synonym: Spea_3848

Alternate gene names: 157963659

Gene position: 4675467-4675730 (Clockwise)

Preceding gene: 157963656

Following gene: 157963661

Centisome position: 90.35

GC content: 49.24

Gene sequence:

>264_bases
ATGGAGCAAGAAATGGTACTACTGGCGCAGAAGATGGATGTTGCCGAAGAGATGGATCGTCTTGACGCCCACGTAGCAGA
AACTCGCCGCATTCTGAAGAAAGGTGGCGCACAAGGTCGCCGTCTAGACTTTATGATGCAAGAGTTTAACCGTGAATCAA
ACACCCTAGCGTCTAAGTCAATCAGTGCCGAAGTGACGGCCGCAGCGGTAGAGCTTAAAGTATTGATTGAGCAAATGCGT
GAGCAGATCCAGAACGTAGAGTAA

Upstream 100 bases:

>100_bases
CATTTGTTGGGGATATTAACTTCTCAGCTTAATGCTAGGCTTTTTGTTGATTTAAGCGAAAACGTTTCTCCAAAGCCAGC
TAGGACTCGCACATCTTCGT

Downstream 100 bases:

>100_bases
TTGATTCTGAGATTGTGAAAGTTGTTGTAAAAGACAAATAGTAAAATATAACAAGAGCCCAGCTAAATGCTGGGCTTTTT
GTTGGCAAAACAGCCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQGRRLDFMMQEFNRESNTLASKSISAEVTAAAVELKVLIEQMR
EQIQNVE

Sequences:

>Translated_87_residues
MEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQGRRLDFMMQEFNRESNTLASKSISAEVTAAAVELKVLIEQMR
EQIQNVE
>Mature_87_residues
MEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQGRRLDFMMQEFNRESNTLASKSISAEVTAAAVELKVLIEQMR
EQIQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=87, Percent_Identity=80.4597701149425, Blast_Score=141, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 9937; Mature: 9937

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQGRRLDFMMQEFNRESNTLASKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH
ISAEVTAAAVELKVLIEQMREQIQNVE
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQGRRLDFMMQEFNRESNTLASKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH
ISAEVTAAAVELKVLIEQMREQIQNVE
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]