| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is folE [H]
Identifier: 157963653
GI number: 157963653
Start: 4669611
End: 4670270
Strand: Direct
Name: folE [H]
Synonym: Spea_3842
Alternate gene names: 157963653
Gene position: 4669611-4670270 (Clockwise)
Preceding gene: 157963652
Following gene: 157963656
Centisome position: 90.24
GC content: 48.64
Gene sequence:
>660_bases ATGACATCAAAAGAAGCAATCCTCAGTGAATCTGCTCAAATCGTACAATCTGCATTAATTGAGCGCGGCCTCGAGACGCC GATGTTGCCGAGTGAGCTAAGCGCTGAAGTACGCAAAGACAAGATTGAGCATCATATGCGTGAAATCTTGACCTTAATGT CACTAGACTTAAGCGATGATAGCCTAGCCGATACCCCGCGTCGTATCGCCAAGATGTATGTCGATGAGATATTCTCAGGC CTAGACTACGCCAACTTCCCCAAGATCACCGTTATCGAAAACAAGATGGGCTTCGATGAGATGGTAAAGGTGAATGACAT CAGCTTAACCAGTACCTGTGAACATCACTTAGTGACTATCGATGGCCTAGCGACCGTAGCCTACTTACCGCGCAAGAACA TCATTGGCCTGTCTAAGATTAACCGTATCGTACGTTTCTTTGCTCAGCGCCCTCAGGTGCAAGAACGTCTGACTCAGCAG GTTCTAGTGGCGCTACAGGCACTACTAGGCACTAAAGACGTGGCAGTTAAGATGGATGCGGTGCATTACTGCGTTAAATC ACGCGGCGTGATGGACTCGACCAGCTCGACCACCACTACAGCACTAGGCGGCATCTTTAAGTCCAACCCAGCGACAAGAG CTGAGTTCTTAAGCAATTAG
Upstream 100 bases:
>100_bases AACTTGTTTTTATGAAATAACTTAGTCTCAATGAGACTGACGGCCCTAGTACACAGGATACGAATCTCACCACTCATTAT TTATGGTGAAGGAGGAACTT
Downstream 100 bases:
>100_bases GTCCTAGGTCCTAGGTCCTAGGTCCTAAAAGATTAAAGCACCAAAACAAAAACGCTGCGTCATAAACGCAGCGTTTTTTC GTTTTCGGCGAAGCAAAAGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTSKEAILSESAQIVQSALIERGLETPMLPSELSAEVRKDKIEHHMREILTLMSLDLSDDSLADTPRRIAKMYVDEIFSG LDYANFPKITVIENKMGFDEMVKVNDISLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQ VLVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN
Sequences:
>Translated_219_residues MTSKEAILSESAQIVQSALIERGLETPMLPSELSAEVRKDKIEHHMREILTLMSLDLSDDSLADTPRRIAKMYVDEIFSG LDYANFPKITVIENKMGFDEMVKVNDISLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQ VLVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN >Mature_218_residues TSKEAILSESAQIVQSALIERGLETPMLPSELSAEVRKDKIEHHMREILTLMSLDLSDDSLADTPRRIAKMYVDEIFSGL DYANFPKITVIENKMGFDEMVKVNDISLTSTCEHHLVTIDGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQV LVALQALLGTKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=120, Percent_Identity=47.5, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI4503949, Length=120, Percent_Identity=47.5, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI66932970, Length=98, Percent_Identity=44.8979591836735, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI66932972, Length=82, Percent_Identity=50, Blast_Score=84, Evalue=9e-17, Organism=Escherichia coli, GI1788476, Length=212, Percent_Identity=70.7547169811321, Blast_Score=301, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17560486, Length=177, Percent_Identity=39.5480225988701, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6321706, Length=183, Percent_Identity=40.9836065573771, Blast_Score=128, Evalue=7e-31, Organism=Drosophila melanogaster, GI24656782, Length=120, Percent_Identity=48.3333333333333, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24656796, Length=120, Percent_Identity=48.3333333333333, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24656791, Length=120, Percent_Identity=48.3333333333333, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24315; Mature: 24184
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKEAILSESAQIVQSALIERGLETPMLPSELSAEVRKDKIEHHMREILTLMSLDLSDD CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLADTPRRIAKMYVDEIFSGLDYANFPKITVIENKMGFDEMVKVNDISLTSTCEHHLVTI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHEECCCCHHHHHCHHEEEE DGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQALLGTKDVAVKMDA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure TSKEAILSESAQIVQSALIERGLETPMLPSELSAEVRKDKIEHHMREILTLMSLDLSDD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLADTPRRIAKMYVDEIFSGLDYANFPKITVIENKMGFDEMVKVNDISLTSTCEHHLVTI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHEECCCCHHHHHCHHEEEE DGLATVAYLPRKNIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQALLGTKDVAVKMDA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLSN HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA