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The map label for this gene is yebA [C]

Identifier: 157963615

GI number: 157963615

Start: 4626611

End: 4627510

Strand: Reverse

Name: yebA [C]

Synonym: Spea_3804

Alternate gene names: 157963615

Gene position: 4627510-4626611 (Counterclockwise)

Preceding gene: 157963617

Following gene: 157963614

Centisome position: 89.43

GC content: 44.89

Gene sequence:

>900_bases
ATGAGTGTAACAGTTTTTATTCAAGGTCGAAATGGTGCCACACGCTGGCAACCAGGAAAGCGTTGGCTGCTTTTGCCGAT
ACTGCTCATAGCAGCGGGTACGGGCCTTTATCAGCACAATGCTAAGCAACTTACACAGCAACAAGCTAATGTCGATAGCG
AGCGTATGGCTCGTGAAGAACAAAAGGATGAGTTGATCGCGTTAAAGAGCGCGACTGAAACTCAGCTTTCGATGTTGGTA
GCTCATGTCGCTCGTATGCAAGCTAAACTCACGCGCTTAGAAGCCTTGGGTCAGCAAGTTGCTTTAAATAATCAATTAGA
AGATCAGTTTGATTTCTCTTCAGAAGTCGGTGTTGGCGGTATCAGTGATTTAGGTACTAACATCGAACTCGATCAGCTTA
TCGCCGATATGGATGAGCTAGTATCTCGAATAGATAATAATAATGTTCAGCTTTCACTACTTGAAACGGTAGCATCTAAT
CTCCATATAGATGAAGAACGTTATATATCTGGGCGACCAATTCAGAAAGGTTGGTTATCTTCGCCCTACGGTTTACGTAA
TGATCCTTTTAACGGTAAACGTACGATGCATAAAGGTATCGACTTTGCCGGAAAAGAGGGCGTCGATGTAATCGCTACCG
CAGGTGGCGTAGTTACATGGGCGGACAAGATGTTTGGTTATGGTGAGTTAGTTGAAATTGATCATGGAAATGGTCTAAGC
ACTCGCTATGGTCACAATAAAGCTTTGTCAGTAAATGTGGGTGATGTGGTCGCTAAAGGCGAAAAAATCGCTGTTATGGG
GAGTACTGGGCGCTCGACTGGGCCTCATGTGCACTATGAAGTGTTGCGCGGTGGACAGCAAATAGATCCGCAAAAATATG
TCTACCGCAAGGCAGGGTAA

Upstream 100 bases:

>100_bases
CTTTTTCAGCGAGATTAGGCATGTTGCCTTGCTGATGCAGTAATTGACTGAGATCCTGAGGGGGCTTTTTCATATGATAA
TAAAATGGCTTAATTAGGCT

Downstream 100 bases:

>100_bases
TCGTAAAATAGGCTTTCAGGCTCTAAAAGGGACTTGGCCAATAACATAGAAGTGGTTCAGATGTTTGGTAAATTACTGAC
AAAAGTATTTGGTAGTCGCA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSVTVFIQGRNGATRWQPGKRWLLLPILLIAAGTGLYQHNAKQLTQQQANVDSERMAREEQKDELIALKSATETQLSMLV
AHVARMQAKLTRLEALGQQVALNNQLEDQFDFSSEVGVGGISDLGTNIELDQLIADMDELVSRIDNNNVQLSLLETVASN
LHIDEERYISGRPIQKGWLSSPYGLRNDPFNGKRTMHKGIDFAGKEGVDVIATAGGVVTWADKMFGYGELVEIDHGNGLS
TRYGHNKALSVNVGDVVAKGEKIAVMGSTGRSTGPHVHYEVLRGGQQIDPQKYVYRKAG

Sequences:

>Translated_299_residues
MSVTVFIQGRNGATRWQPGKRWLLLPILLIAAGTGLYQHNAKQLTQQQANVDSERMAREEQKDELIALKSATETQLSMLV
AHVARMQAKLTRLEALGQQVALNNQLEDQFDFSSEVGVGGISDLGTNIELDQLIADMDELVSRIDNNNVQLSLLETVASN
LHIDEERYISGRPIQKGWLSSPYGLRNDPFNGKRTMHKGIDFAGKEGVDVIATAGGVVTWADKMFGYGELVEIDHGNGLS
TRYGHNKALSVNVGDVVAKGEKIAVMGSTGRSTGPHVHYEVLRGGQQIDPQKYVYRKAG
>Mature_298_residues
SVTVFIQGRNGATRWQPGKRWLLLPILLIAAGTGLYQHNAKQLTQQQANVDSERMAREEQKDELIALKSATETQLSMLVA
HVARMQAKLTRLEALGQQVALNNQLEDQFDFSSEVGVGGISDLGTNIELDQLIADMDELVSRIDNNNVQLSLLETVASNL
HIDEERYISGRPIQKGWLSSPYGLRNDPFNGKRTMHKGIDFAGKEGVDVIATAGGVVTWADKMFGYGELVEIDHGNGLST
RYGHNKALSVNVGDVVAKGEKIAVMGSTGRSTGPHVHYEVLRGGQQIDPQKYVYRKAG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=105, Percent_Identity=40.9523809523809, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082297, Length=132, Percent_Identity=35.6060606060606, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789099, Length=109, Percent_Identity=37.6146788990826, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082174, Length=121, Percent_Identity=34.7107438016529, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32797; Mature: 32665

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTVFIQGRNGATRWQPGKRWLLLPILLIAAGTGLYQHNAKQLTQQQANVDSERMAREE
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
QKDELIALKSATETQLSMLVAHVARMQAKLTRLEALGQQVALNNQLEDQFDFSSEVGVGG
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
ISDLGTNIELDQLIADMDELVSRIDNNNVQLSLLETVASNLHIDEERYISGRPIQKGWLS
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCHHHCCCCCCCCCCCCC
SPYGLRNDPFNGKRTMHKGIDFAGKEGVDVIATAGGVVTWADKMFGYGELVEIDHGNGLS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHCCCCCEEEEECCCCCC
TRYGHNKALSVNVGDVVAKGEKIAVMGSTGRSTGPHVHYEVLRGGQQIDPQKYVYRKAG
CCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCEEEHHHHCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SVTVFIQGRNGATRWQPGKRWLLLPILLIAAGTGLYQHNAKQLTQQQANVDSERMAREE
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
QKDELIALKSATETQLSMLVAHVARMQAKLTRLEALGQQVALNNQLEDQFDFSSEVGVGG
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
ISDLGTNIELDQLIADMDELVSRIDNNNVQLSLLETVASNLHIDEERYISGRPIQKGWLS
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCHHHCCCCCCCCCCCCC
SPYGLRNDPFNGKRTMHKGIDFAGKEGVDVIATAGGVVTWADKMFGYGELVEIDHGNGLS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHCCCCCEEEEECCCCCC
TRYGHNKALSVNVGDVVAKGEKIAVMGSTGRSTGPHVHYEVLRGGQQIDPQKYVYRKAG
CCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCEEEHHHHCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]