| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is secA [H]
Identifier: 157963614
GI number: 157963614
Start: 4623827
End: 4626550
Strand: Reverse
Name: secA [H]
Synonym: Spea_3803
Alternate gene names: 157963614
Gene position: 4626550-4623827 (Counterclockwise)
Preceding gene: 157963615
Following gene: 157963601
Centisome position: 89.41
GC content: 44.86
Gene sequence:
>2724_bases ATGTTTGGTAAATTACTGACAAAAGTATTTGGTAGTCGCAACGATCGTACACTTAAGGCATTTGGTAAAGTCGTTAATAA GGTTAACGCGCTAGAAGCTGAATACGAAAAGCTATCGGATGAAGAATTAAAAGCAAAAACAGCCCACTTCCGCGAGCGTT TAGACGGTGGTGAATCATTAGAAGGCGTTTTACCAGAAGCATTTGCTACTGTACGTGAAGCATCGAAGCGTGTATTTGAT ATGCGCCACTTCGATGTACAGCTTATTGGCGGCATGATTTTGGATAGTAACCGTATCGCAGAAATGCGTACCGGTGAAGG TAAAACCCTAACGGCAACTCTGCCTGCTTATTTAAATGGTTTAACAGGTAAAGGTGTTCACGTTATTACAGTGAACGACT ACCTAGCTGGCCGTGATGCTGAAAATAACCGTCCTCTTTTTGAATTCCTTGGCTTAACTGTTGGTATTAACGTTGCGGGT CTTGGCCAGGTAGAAAAGAAAGCGGCTTATGATGCTGATATTACCTACGGAACTAACAATGAATTTGGTTTCGATTACCT GCGTGACAACATGGCGTTCTCTCCAAGCGAACGCGTACAACGGCCATTGCATTACGCGCTAATCGACGAAGTCGACTCGA TTCTTATTGATGAAGCACGTACTCCGTTAATTATTTCTGGTGCTGCTGAAGATAGCTCTGAGCTATACATCAAGATTAAC ACGCTAATCCCTAACCTTATCGCGCAAGAGAAAGAAGATACTGAAGATTATGTGGGCGAAGGCGACTACTCTGTAGATGA GAAGTCAAAGCAAGTTCATATGACTGAGCGTGGGCAAGAGAAGGTTGAGGTCTTATTGACTGAGCGCGGCATGCTTGCCG AAGGTGATTCACTCTACTCAGCGGCTAACATCTCTTTATTACACCATGTGAATGCAGCACTACGCGCGCACACATTATTC GAGAAAGACGTCGACTATATTGTTCAAGATAACGAAGTAGTTATCGTTGATGAGCATACAGGCCGTACTATGCCTGGTCG TCGCTGGTCTGAAGGTCTACATCAAGCGGTTGAAGCGAAAGAAGGCGTTCATATTCAAAATGAAAACCAGACTCTTGCAT CGATTACATTCCAGAACTTCTTCCGTCAATATGAAAAGCTTGCAGGTATGACGGGTACTGCCGATACCGAAGCGTTCGAA TTCCAGCATATTTATGGTCTTGATACTGTAGTAGTACCAACAAACCGTCCAATGGTTCGTAAAGATCATCCGGATCTGGT TTACTTAACTGCTGAAGAGAAGTATGCCGCGATCGTTAAAGATATCGTTGGCTGTCGTGAGCGTGGTCAGCCAGTATTGG TTGGTACGGTTTCGATTGAGCAGTCAGAACTGCTGCACAGCTTACTGAAGAAAGAAAAGATCCCACATGAGATCTTGAAT GCTAAGTTCCACGAACGTGAAGCAGATATCGTTGCTCAAGCGGGTCGTACTGGAGCGGTAACCGTTGCAACTAACATGGC GGGTCGTGGTACCGATATCGTGTTAGGTGGTAACTGGAACATGGAGATCGAAGCGCTAACCAATCCAACTGACGAGCAGA AAGCCAAGATTAAGGCTGACTGGAAAATTCGTCACGACGAAGTTGTTGAAGCCGGTGGTCTACACATCTTAGGTACAGAG CGTCACGAATCTCGCCGTATCGATAACCAGTTACGTGGTCGTTCTGGTCGTCAAGGTGACTCTGGTTCTTCTCGTTTTTA CCTATCTATGGAAGATAGCTTAATGCGTATCTTCGCTTCAGACCGTGTCTCTTCAATGATGAAGAAGCTAGGTATGGAAG AAGGTGAAGCGATTGAGCATCCATGGGTGTCACGTGCTATCGAAAACGCGCAGCGTAAAGTAGAAGCTCGTAACTTCGAT ATTCGTAAGCAGTTACTTGAGTTTGATGATGTTGCTAACGATCAGCGCCAAGTCGTTTACGCGCAGCGTAATGAATTAAT GGATGCCGAAAGTATTCAAGATACTATCACCAATATTCAAGAAGACGTGGTTAATGGTTTAGTTGATCAATACATTCCGC GTCAATCAGTAGAAGAGCTTTGGGATGTCGAAGGCCTAGAGAAACGTCTGCAACAAGAATATGCAATGAGTCTACCTATC CAAGAGTGGCTAGATAAAGAAGATGACTTGCACGAAGAAACATTACGTGAGCGTATTGTTGAAACTTGGGTTAATGCATA CAAAGCTAAAGAAGAGATGGTAGGCGAGCAAGTGCTACGTCAATTCGAAAAAGCGGTAATGCTACAAACGCTAGACGGTT TATGGAAAGAGCACCTTTCAGCGATGGACCACTTGCGCCAAGGTATCCACTTACGTGGCTATGCACAGAAGAATCCAAAG CAAGAATATAAGCGTGAATCATTCGAGCTATTCCAGCAGATGCTTGAGTCATTAAAGCATGACGTCATTAGTGTATTGTC TAAAGTACAAGTACAGGCACAGTCAGATGTTGAAGAGATGGAAGAGCGCCGTCGTCAAGAAGACGCAAAAATCCGTCGTG ACTATCAACACGCAGAAGCTGAAGCCATCGTTGGCGCTGAAGAAAGTGCAGCGCTTGCGGCTACTCAGCCAACGGTACGT GATGGCGAAAAAGTGGGACGTAACGATCCATGCCCATGTGGTTCAGGCAAGAAGTATAAACAGTGTCACGGTAAGCTAAG CTAA
Upstream 100 bases:
>100_bases AATAGATCCGCAAAAATATGTCTACCGCAAGGCAGGGTAATCGTAAAATAGGCTTTCAGGCTCTAAAAGGGACTTGGCCA ATAACATAGAAGTGGTTCAG
Downstream 100 bases:
>100_bases ACGCATAGACTTAATAGAAGAAAAGGGTGTCTCATTGAGGCACCCTTTTTTATTACTGAGAATTTAACAGGTCGTAATAG ATATTCACATGATCGCGATT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MFGKLLTKVFGSRNDRTLKAFGKVVNKVNALEAEYEKLSDEELKAKTAHFRERLDGGESLEGVLPEAFATVREASKRVFD MRHFDVQLIGGMILDSNRIAEMRTGEGKTLTATLPAYLNGLTGKGVHVITVNDYLAGRDAENNRPLFEFLGLTVGINVAG LGQVEKKAAYDADITYGTNNEFGFDYLRDNMAFSPSERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN TLIPNLIAQEKEDTEDYVGEGDYSVDEKSKQVHMTERGQEKVEVLLTERGMLAEGDSLYSAANISLLHHVNAALRAHTLF EKDVDYIVQDNEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFE FQHIYGLDTVVVPTNRPMVRKDHPDLVYLTAEEKYAAIVKDIVGCRERGQPVLVGTVSIEQSELLHSLLKKEKIPHEILN AKFHEREADIVAQAGRTGAVTVATNMAGRGTDIVLGGNWNMEIEALTNPTDEQKAKIKADWKIRHDEVVEAGGLHILGTE RHESRRIDNQLRGRSGRQGDSGSSRFYLSMEDSLMRIFASDRVSSMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFD IRKQLLEFDDVANDQRQVVYAQRNELMDAESIQDTITNIQEDVVNGLVDQYIPRQSVEELWDVEGLEKRLQQEYAMSLPI QEWLDKEDDLHEETLRERIVETWVNAYKAKEEMVGEQVLRQFEKAVMLQTLDGLWKEHLSAMDHLRQGIHLRGYAQKNPK QEYKRESFELFQQMLESLKHDVISVLSKVQVQAQSDVEEMEERRRQEDAKIRRDYQHAEAEAIVGAEESAALAATQPTVR DGEKVGRNDPCPCGSGKKYKQCHGKLS
Sequences:
>Translated_907_residues MFGKLLTKVFGSRNDRTLKAFGKVVNKVNALEAEYEKLSDEELKAKTAHFRERLDGGESLEGVLPEAFATVREASKRVFD MRHFDVQLIGGMILDSNRIAEMRTGEGKTLTATLPAYLNGLTGKGVHVITVNDYLAGRDAENNRPLFEFLGLTVGINVAG LGQVEKKAAYDADITYGTNNEFGFDYLRDNMAFSPSERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN TLIPNLIAQEKEDTEDYVGEGDYSVDEKSKQVHMTERGQEKVEVLLTERGMLAEGDSLYSAANISLLHHVNAALRAHTLF EKDVDYIVQDNEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFE FQHIYGLDTVVVPTNRPMVRKDHPDLVYLTAEEKYAAIVKDIVGCRERGQPVLVGTVSIEQSELLHSLLKKEKIPHEILN AKFHEREADIVAQAGRTGAVTVATNMAGRGTDIVLGGNWNMEIEALTNPTDEQKAKIKADWKIRHDEVVEAGGLHILGTE RHESRRIDNQLRGRSGRQGDSGSSRFYLSMEDSLMRIFASDRVSSMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFD IRKQLLEFDDVANDQRQVVYAQRNELMDAESIQDTITNIQEDVVNGLVDQYIPRQSVEELWDVEGLEKRLQQEYAMSLPI QEWLDKEDDLHEETLRERIVETWVNAYKAKEEMVGEQVLRQFEKAVMLQTLDGLWKEHLSAMDHLRQGIHLRGYAQKNPK QEYKRESFELFQQMLESLKHDVISVLSKVQVQAQSDVEEMEERRRQEDAKIRRDYQHAEAEAIVGAEESAALAATQPTVR DGEKVGRNDPCPCGSGKKYKQCHGKLS >Mature_907_residues MFGKLLTKVFGSRNDRTLKAFGKVVNKVNALEAEYEKLSDEELKAKTAHFRERLDGGESLEGVLPEAFATVREASKRVFD MRHFDVQLIGGMILDSNRIAEMRTGEGKTLTATLPAYLNGLTGKGVHVITVNDYLAGRDAENNRPLFEFLGLTVGINVAG LGQVEKKAAYDADITYGTNNEFGFDYLRDNMAFSPSERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN TLIPNLIAQEKEDTEDYVGEGDYSVDEKSKQVHMTERGQEKVEVLLTERGMLAEGDSLYSAANISLLHHVNAALRAHTLF EKDVDYIVQDNEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFE FQHIYGLDTVVVPTNRPMVRKDHPDLVYLTAEEKYAAIVKDIVGCRERGQPVLVGTVSIEQSELLHSLLKKEKIPHEILN AKFHEREADIVAQAGRTGAVTVATNMAGRGTDIVLGGNWNMEIEALTNPTDEQKAKIKADWKIRHDEVVEAGGLHILGTE RHESRRIDNQLRGRSGRQGDSGSSRFYLSMEDSLMRIFASDRVSSMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFD IRKQLLEFDDVANDQRQVVYAQRNELMDAESIQDTITNIQEDVVNGLVDQYIPRQSVEELWDVEGLEKRLQQEYAMSLPI QEWLDKEDDLHEETLRERIVETWVNAYKAKEEMVGEQVLRQFEKAVMLQTLDGLWKEHLSAMDHLRQGIHLRGYAQKNPK QEYKRESFELFQQMLESLKHDVISVLSKVQVQAQSDVEEMEERRRQEDAKIRRDYQHAEAEAIVGAEESAALAATQPTVR DGEKVGRNDPCPCGSGKKYKQCHGKLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=907, Percent_Identity=71.5545755237045, Blast_Score=1348, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 102603; Mature: 102603
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00903 CYT_DCMP_DEAMINASES ; PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGKLLTKVFGSRNDRTLKAFGKVVNKVNALEAEYEKLSDEELKAKTAHFRERLDGGESL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH EGVLPEAFATVREASKRVFDMRHFDVQLIGGMILDSNRIAEMRTGEGKTLTATLPAYLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEECCCCCEEEEECHHHHCC LTGKGVHVITVNDYLAGRDAENNRPLFEFLGLTVGINVAGLGQVEKKAAYDADITYGTNN CCCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEECCCC EFGFDYLRDNMAFSPSERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEH TLIPNLIAQEKEDTEDYVGEGDYSVDEKSKQVHMTERGQEKVEVLLTERGMLAEGDSLYS HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHCCCCCCCCCCHHH AANISLLHHVNAALRAHTLFEKDVDYIVQDNEVVIVDEHTGRTMPGRRWSEGLHQAVEAK HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH EGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCEEEECCCCCCCC KDHPDLVYLTAEEKYAAIVKDIVGCRERGQPVLVGTVSIEQSELLHSLLKKEKIPHEILN CCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHC AKFHEREADIVAQAGRTGAVTVATNMAGRGTDIVLGGNWNMEIEALTNPTDEQKAKIKAD CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEC WKIRHDEVVEAGGLHILGTERHESRRIDNQLRGRSGRQGDSGSSRFYLSMEDSLMRIFAS EEECHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSSMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH AQRNELMDAESIQDTITNIQEDVVNGLVDQYIPRQSVEELWDVEGLEKRLQQEYAMSLPI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCH QEWLDKEDDLHEETLRERIVETWVNAYKAKEEMVGEQVLRQFEKAVMLQTLDGLWKEHLS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQMLESLKHDVISVLSKVQVQAQSDVEEM HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EERRRQEDAKIRRDYQHAEAEAIVGAEESAALAATQPTVRDGEKVGRNDPCPCGSGKKYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCHHH QCHGKLS HHCCCCC >Mature Secondary Structure MFGKLLTKVFGSRNDRTLKAFGKVVNKVNALEAEYEKLSDEELKAKTAHFRERLDGGESL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH EGVLPEAFATVREASKRVFDMRHFDVQLIGGMILDSNRIAEMRTGEGKTLTATLPAYLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEECCCCCEEEEECHHHHCC LTGKGVHVITVNDYLAGRDAENNRPLFEFLGLTVGINVAGLGQVEKKAAYDADITYGTNN CCCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEECCCC EFGFDYLRDNMAFSPSERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEH TLIPNLIAQEKEDTEDYVGEGDYSVDEKSKQVHMTERGQEKVEVLLTERGMLAEGDSLYS HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHCCCCCCCCCCHHH AANISLLHHVNAALRAHTLFEKDVDYIVQDNEVVIVDEHTGRTMPGRRWSEGLHQAVEAK HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH EGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCEEEECCCCCCCC KDHPDLVYLTAEEKYAAIVKDIVGCRERGQPVLVGTVSIEQSELLHSLLKKEKIPHEILN CCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHC AKFHEREADIVAQAGRTGAVTVATNMAGRGTDIVLGGNWNMEIEALTNPTDEQKAKIKAD CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEC WKIRHDEVVEAGGLHILGTERHESRRIDNQLRGRSGRQGDSGSSRFYLSMEDSLMRIFAS EEECHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSSMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH AQRNELMDAESIQDTITNIQEDVVNGLVDQYIPRQSVEELWDVEGLEKRLQQEYAMSLPI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCH QEWLDKEDDLHEETLRERIVETWVNAYKAKEEMVGEQVLRQFEKAVMLQTLDGLWKEHLS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQMLESLKHDVISVLSKVQVQAQSDVEEM HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EERRRQEDAKIRRDYQHAEAEAIVGAEESAALAATQPTVRDGEKVGRNDPCPCGSGKKYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCHHH QCHGKLS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA