| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963575
Identifier: 157963575
GI number: 157963575
Start: 4576275
End: 4576766
Strand: Reverse
Name: 157963575
Synonym: Spea_3763
Alternate gene names: NA
Gene position: 4576766-4576275 (Counterclockwise)
Preceding gene: 157963576
Following gene: 157963574
Centisome position: 88.45
GC content: 46.14
Gene sequence:
>492_bases GTGCTTAGTCAACATAAAGCCGATTCAGAGCTGTTGAATGTCTATGGCAAACTTATAGCCTTAATTATTCTACTAATTGT ATTGTTTTACTTAAGCTTTAATTACTTTGGCAGCATTAAGCAGCTTGGCCAGCCAAGCATCCAAGTAGAGCACACACGTT TGCTTAATGTACTCGGTGTAGCAAGGTCGCAATGGTTGATGCGCAGTAAGCCGGATATCCTATTACTTGACTGGTATTCC GATAGCCAAGAGCATGCTTCATCCACAGGGCAAGTGCGTATGGCAGCGGGTGGATGGCCTATTCCTGACGAGACAAGTGT TGCGGGGTGTCGACGGTTATTGATTGAATTGTTGGGTCCCGGTTATATGAAACAAATCGACACCCGATTCAACCCAGATA CAGGCGTGTGCCGTTATCTTGGCGAGTCGGGCGAAAGTATTAGCTATCAAACCACTTCTGGGCGGGTCATTTTTTTGACG CAGGCTCGCTAA
Upstream 100 bases:
>100_bases CGCCTGTATCGTGTTGGTGTTGGCGCTGGGTATTTACCTACCTATGTGGGACATGTTGAATGTGGTTAAGGGCGGTAACT GATGAAGCAGGAAAAGCCCC
Downstream 100 bases:
>100_bases GAGTGCCTGAATAGTGAAATTATCTGTTTTCTAATTTTAACAAACTGCTAGAATAGCCGCATACAAGATTGGGGGTAAAA TGAAACAACAGTATCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLSQHKADSELLNVYGKLIALIILLIVLFYLSFNYFGSIKQLGQPSIQVEHTRLLNVLGVARSQWLMRSKPDILLLDWYS DSQEHASSTGQVRMAAGGWPIPDETSVAGCRRLLIELLGPGYMKQIDTRFNPDTGVCRYLGESGESISYQTTSGRVIFLT QAR
Sequences:
>Translated_163_residues MLSQHKADSELLNVYGKLIALIILLIVLFYLSFNYFGSIKQLGQPSIQVEHTRLLNVLGVARSQWLMRSKPDILLLDWYS DSQEHASSTGQVRMAAGGWPIPDETSVAGCRRLLIELLGPGYMKQIDTRFNPDTGVCRYLGESGESISYQTTSGRVIFLT QAR >Mature_163_residues MLSQHKADSELLNVYGKLIALIILLIVLFYLSFNYFGSIKQLGQPSIQVEHTRLLNVLGVARSQWLMRSKPDILLLDWYS DSQEHASSTGQVRMAAGGWPIPDETSVAGCRRLLIELLGPGYMKQIDTRFNPDTGVCRYLGESGESISYQTTSGRVIFLT QAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18252; Mature: 18252
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQHKADSELLNVYGKLIALIILLIVLFYLSFNYFGSIKQLGQPSIQVEHTRLLNVLGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ARSQWLMRSKPDILLLDWYSDSQEHASSTGQVRMAAGGWPIPDETSVAGCRRLLIELLGP HHHHHHHCCCCCEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC GYMKQIDTRFNPDTGVCRYLGESGESISYQTTSGRVIFLTQAR HHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEECCC >Mature Secondary Structure MLSQHKADSELLNVYGKLIALIILLIVLFYLSFNYFGSIKQLGQPSIQVEHTRLLNVLGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ARSQWLMRSKPDILLLDWYSDSQEHASSTGQVRMAAGGWPIPDETSVAGCRRLLIELLGP HHHHHHHCCCCCEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC GYMKQIDTRFNPDTGVCRYLGESGESISYQTTSGRVIFLTQAR HHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA