| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963574
Identifier: 157963574
GI number: 157963574
Start: 4575587
End: 4576195
Strand: Reverse
Name: 157963574
Synonym: Spea_3762
Alternate gene names: NA
Gene position: 4576195-4575587 (Counterclockwise)
Preceding gene: 157963575
Following gene: 157963573
Centisome position: 88.44
GC content: 45.48
Gene sequence:
>609_bases ATGAAACAACAGTATCAAAAAGGCTTTTCTCTTATAGAGTTGGTCATAGTTATCGTGATTTTAGGTCTGTTGGCTGCAAC AGCTATCCCACGTTTCTTAAACGTAACTGATGATGCTGAAGACGCCAGTGTAGACGGTGTCGCAGGCGGGCTAAGTACTG CAGTGAGCTTTGTGCGTTCACAGTGGGAAGTCGATGGTCGTCGAAATAATACCGTGTTACTGGACGGAACAACGGTAGCT CTGGATACGCGTTTTGGTTATCCAACGGGCCAGAGTAATACAGATGCTAAAGGCATGAGCCAAGACTCTTGCCAAGAAGT GTTCGATCTTGTTTTACAAAATGCACCACGAAGCGTCGTTTCAGGAGAAGACGCGCGTAAAGCAAGATATGTAGTGAGCG TGGCAAAAGGAGCGGGTGGCAGTTCAAATAGCATAGATGGCGAGCTTGTTAGCGATCTTGATGTTTGTTTATATTACCTA GCCTCATCACTAGTGTTAAATCCACAGGACGGTAAACCGACTGAGAATTTAACCGACTTAAGTAACTTGGCGGGCAAAGG GGTGACCTACAACCCAGGTTCAGGTCAAGTTGCTAGTTTTATTGACTAA
Upstream 100 bases:
>100_bases TTTTTGACGCAGGCTCGCTAAGAGTGCCTGAATAGTGAAATTATCTGTTTTCTAATTTTAACAAACTGCTAGAATAGCCG CATACAAGATTGGGGGTAAA
Downstream 100 bases:
>100_bases AATAATCGTTATTTATTGACTAAAGTGATTGTTAGTCGTTGAAGTCATTAGTTGATGTAAACAGTAAATAGTAAATAGTT TTCGGTAGGCAGATTTGATC
Product: methylation site containing protein
Products: NA
Alternate protein names: Methylation Site Containing Protein; Pilin Protein; Msha Pilin Protein Mshb; Prepilin-Type Cleavage/Methylation; Methylation
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKQQYQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRSQWEVDGRRNNTVLLDGTTVA LDTRFGYPTGQSNTDAKGMSQDSCQEVFDLVLQNAPRSVVSGEDARKARYVVSVAKGAGGSSNSIDGELVSDLDVCLYYL ASSLVLNPQDGKPTENLTDLSNLAGKGVTYNPGSGQVASFID
Sequences:
>Translated_202_residues MKQQYQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRSQWEVDGRRNNTVLLDGTTVA LDTRFGYPTGQSNTDAKGMSQDSCQEVFDLVLQNAPRSVVSGEDARKARYVVSVAKGAGGSSNSIDGELVSDLDVCLYYL ASSLVLNPQDGKPTENLTDLSNLAGKGVTYNPGSGQVASFID >Mature_202_residues MKQQYQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRSQWEVDGRRNNTVLLDGTTVA LDTRFGYPTGQSNTDAKGMSQDSCQEVFDLVLQNAPRSVVSGEDARKARYVVSVAKGAGGSSNSIDGELVSDLDVCLYYL ASSLVLNPQDGKPTENLTDLSNLAGKGVTYNPGSGQVASFID
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21300; Mature: 21300
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQYQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QWEVDGRRNNTVLLDGTTVALDTRFGYPTGQSNTDAKGMSQDSCQEVFDLVLQNAPRSVV HHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH SGEDARKARYVVSVAKGAGGSSNSIDGELVSDLDVCLYYLASSLVLNPQDGKPTENLTDL CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHH SNLAGKGVTYNPGSGQVASFID HHHCCCCCEECCCCCCHHCCCC >Mature Secondary Structure MKQQYQKGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QWEVDGRRNNTVLLDGTTVALDTRFGYPTGQSNTDAKGMSQDSCQEVFDLVLQNAPRSVV HHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH SGEDARKARYVVSVAKGAGGSSNSIDGELVSDLDVCLYYLASSLVLNPQDGKPTENLTDL CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHH SNLAGKGVTYNPGSGQVASFID HHHCCCCCEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA