| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yjeE [H]
Identifier: 157963358
GI number: 157963358
Start: 4328138
End: 4328620
Strand: Reverse
Name: yjeE [H]
Synonym: Spea_3544
Alternate gene names: 157963358
Gene position: 4328620-4328138 (Counterclockwise)
Preceding gene: 157963359
Following gene: 157963357
Centisome position: 83.65
GC content: 40.37
Gene sequence:
>483_bases ATGAGTATGCAAGCAATTAGATTAAATTTAAGTGACGAACAAGAAACGGTTAACCTAGGTACTGAGTTAGCAGGGCTGAT CACGCCTCCATTAACTGTTTATTTAAGCGGTGATTTAGGTGCTGGCAAGACGACTTTTAGTCGTGGACTTATTCAAAGTC TTGGCCACCAAGGGGCGGTAAAAAGTCCTACTTATACCTTAGTTGAGCCTTACGAGCTTGATGGGTTAGACGTGTATCAT TTCGACCTGTACCGTTTATACGATCCAGAAGAATTAGAGTTTATGGGTATACGCGATTATTTTACAGATCGTAGCCTTTG TATCGTAGAGTGGCCAGATCGTGGTCATGGTTTATTACCTTGTGCTGATGTACATATCCACATTGAATATGTTAATACTG GAAGGCAAGTTGAGTTACAGGCACTTTCTCCAAAAGGGGAACAAATCCTAGCGGCCCTAAATAATAATGATAATAAACAG TAA
Upstream 100 bases:
>100_bases TTCGCCAGTTAGTTAATGAAATCTAGTTTAGAAAGTTAGGTGATTAGGTTAAAGTAATGCATTCTACGCAGGGTTTTATT AGGACGCTTTTCGATTCGAA
Downstream 100 bases:
>100_bases TATATTTAGATTATTTCTACTTCTTGTTACGTTTGGTGCTTCATTCTTTGCGCAGAGTGCGAATAAACTCGAAAGCGTAA GGATTTGGGCTGCGCCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSMQAIRLNLSDEQETVNLGTELAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDGLDVYH FDLYRLYDPEELEFMGIRDYFTDRSLCIVEWPDRGHGLLPCADVHIHIEYVNTGRQVELQALSPKGEQILAALNNNDNKQ
Sequences:
>Translated_160_residues MSMQAIRLNLSDEQETVNLGTELAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDGLDVYH FDLYRLYDPEELEFMGIRDYFTDRSLCIVEWPDRGHGLLPCADVHIHIEYVNTGRQVELQALSPKGEQILAALNNNDNKQ >Mature_159_residues SMQAIRLNLSDEQETVNLGTELAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAVKSPTYTLVEPYELDGLDVYHF DLYRLYDPEELEFMGIRDYFTDRSLCIVEWPDRGHGLLPCADVHIHIEYVNTGRQVELQALSPKGEQILAALNNNDNKQ
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=63.1944444444444, Blast_Score=189, Evalue=9e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17881; Mature: 17750
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMQAIRLNLSDEQETVNLGTELAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAV CCCEEEEEECCCCCCEEECCCHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC KSPTYTLVEPYELDGLDVYHFDLYRLYDPEELEFMGIRDYFTDRSLCIVEWPDRGHGLLP CCCCEEEECCEECCCEEEEEEEEEEECCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCE CADVHIHIEYVNTGRQVELQALSPKGEQILAALNNNDNKQ EEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure SMQAIRLNLSDEQETVNLGTELAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAV CCEEEEEECCCCCCEEECCCHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC KSPTYTLVEPYELDGLDVYHFDLYRLYDPEELEFMGIRDYFTDRSLCIVEWPDRGHGLLP CCCCEEEECCEECCCEEEEEEEEEEECCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCE CADVHIHIEYVNTGRQVELQALSPKGEQILAALNNNDNKQ EEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]