Click here to switch to the map view.

The map label for this gene is yjeF [H]

Identifier: 157963359

GI number: 157963359

Start: 4328695

End: 4330173

Strand: Reverse

Name: yjeF [H]

Synonym: Spea_3545

Alternate gene names: 157963359

Gene position: 4330173-4328695 (Counterclockwise)

Preceding gene: 157963360

Following gene: 157963358

Centisome position: 83.68

GC content: 49.29

Gene sequence:

>1479_bases
ATGAGCCAAGTACACTCATTACCGACATCCCTATTTCTAACTGAGCAAGTTAGAACCGCTGAATTAAATGCCGTAAATAG
TGGTAGCGTCAGCCTATATCAATTGGTGGAAAGAGCCGGGGCTGCGGCCTTCCAAGTTATAAGTGAAAGGCAAGCAAATA
CGAGCAGAATAGTGATATTGGCGGGGCATGGTAACAATGGTGCCGATGCTTATGTTACAGCTACTTTGTTACTTGAAGCG
GGCTTTTGCGTTAAATTACAAGCAAGTACACCAAGCAATCCGAGTGACGAGCTTACATGTGCGATTCATCGATTTTTAGA
AGCGGGAGGAGAGGCGGTTAAGTTTTGTGGCTCTCAGATTGCAGAGGCTGAAGTGATCGTGGATGGGTTGTTAGGCACAG
GGATCACTGGTGAATTAAGTGCTGAACTGGCCATCGTTATTGACGCCGTAAACAAAAGTAGTGCCTGGGTACTAAGTCTT
GATGTGCCATCGGGCCTGAATCCTGATACGGGAAGTTACACTACCGCAGCGATTGAAGCTGACGTGACTCTGACCTTTGG
CGCTTTAAAGCAAGGCTTGCTAACGGGAAAGGCGCGTCACAATTGTGGGGAGCTGTTGATTGCTGAGTTGGGACTAACGG
GCTATTTACCTGAACCAAGTGCTACGCAGATTGTCTGTAATCAGTGTATTAAGGCGCTTGTTCCCCGTAAAAGAGATGCT
CACAAAGGAGACTGTGGCAAGGTTTCTGTCATTGGTGGCGATTACGGTATGGCAGGAGCTGTGAGGCTAGCTGCAGAGGG
TTGCCTGCGGAGTGGAGCGGGTTTAGTTACTGTTATATCAAGACCTGAACACCAGCTTATTGTCAGCGCGACTCGTCCCG
AACTGATGTTTTGGGGTTGCGAGCTGGTTGATATGGAAGTGTATTTAAGGCTAGGGTGGGCTTCGGCCTTAGTGATCGGC
CCCGGTCTAGGGACTGATGACTGGGGGTATAATTTACTCAAGGCGGTGGATCTAAGCGATAAGCCCTGCGTGATCGATGC
TGACGGCCTTAACTTGCTGAAAGATATGCCTATGAGGCAAAAAGATTGGATATTAACGCCTCATCCTGGTGAAGCCGCTA
GGCTACTCGACATAAGCATCGAAGAGATTGAGCAAGACAGATTCAAGGCCGTAAGTCTGCTGCATCAGGAGTACGGCGGG
GTGATTGTGCTTAAGGGAGCTGGCACACTAATTTATGATGGTAATAAGTGTGTGGTAGCACCAGTTGGTAACCCAGGGCT
TGCAAGTGGAGGCTGTGGTGATGTGCTTGCTGGCGTGATTGGTGGCCTAGTGGCACAAGGCTACTCGAGTATGGAGGCTG
CCTGTTTAGCTGTGGTGATCCATGGTGGTGCGGCAGATTTGGCGGCTAGAATGGGCGAGCGTGGAATGCTAGCGAGTGAC
TTAATGCCCTATATTCGCCAGTTAGTTAATGAAATCTAG

Upstream 100 bases:

>100_bases
CTTCGGCTAGTTATTGGCTTCTAGGATTCATTTGCACTTAAGCCTAAGCCCTTAAGCTATTACATTGATTAATATCTCTC
CAACTTCTAGGAACCGTGAT

Downstream 100 bases:

>100_bases
TTTAGAAAGTTAGGTGATTAGGTTAAAGTAATGCATTCTACGCAGGGTTTTATTAGGACGCTTTTCGATTCGAAATGAGT
ATGCAAGCAATTAGATTAAA

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSQVHSLPTSLFLTEQVRTAELNAVNSGSVSLYQLVERAGAAAFQVISERQANTSRIVILAGHGNNGADAYVTATLLLEA
GFCVKLQASTPSNPSDELTCAIHRFLEAGGEAVKFCGSQIAEAEVIVDGLLGTGITGELSAELAIVIDAVNKSSAWVLSL
DVPSGLNPDTGSYTTAAIEADVTLTFGALKQGLLTGKARHNCGELLIAELGLTGYLPEPSATQIVCNQCIKALVPRKRDA
HKGDCGKVSVIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLIVSATRPELMFWGCELVDMEVYLRLGWASALVIG
PGLGTDDWGYNLLKAVDLSDKPCVIDADGLNLLKDMPMRQKDWILTPHPGEAARLLDISIEEIEQDRFKAVSLLHQEYGG
VIVLKGAGTLIYDGNKCVVAPVGNPGLASGGCGDVLAGVIGGLVAQGYSSMEAACLAVVIHGGAADLAARMGERGMLASD
LMPYIRQLVNEI

Sequences:

>Translated_492_residues
MSQVHSLPTSLFLTEQVRTAELNAVNSGSVSLYQLVERAGAAAFQVISERQANTSRIVILAGHGNNGADAYVTATLLLEA
GFCVKLQASTPSNPSDELTCAIHRFLEAGGEAVKFCGSQIAEAEVIVDGLLGTGITGELSAELAIVIDAVNKSSAWVLSL
DVPSGLNPDTGSYTTAAIEADVTLTFGALKQGLLTGKARHNCGELLIAELGLTGYLPEPSATQIVCNQCIKALVPRKRDA
HKGDCGKVSVIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLIVSATRPELMFWGCELVDMEVYLRLGWASALVIG
PGLGTDDWGYNLLKAVDLSDKPCVIDADGLNLLKDMPMRQKDWILTPHPGEAARLLDISIEEIEQDRFKAVSLLHQEYGG
VIVLKGAGTLIYDGNKCVVAPVGNPGLASGGCGDVLAGVIGGLVAQGYSSMEAACLAVVIHGGAADLAARMGERGMLASD
LMPYIRQLVNEI
>Mature_491_residues
SQVHSLPTSLFLTEQVRTAELNAVNSGSVSLYQLVERAGAAAFQVISERQANTSRIVILAGHGNNGADAYVTATLLLEAG
FCVKLQASTPSNPSDELTCAIHRFLEAGGEAVKFCGSQIAEAEVIVDGLLGTGITGELSAELAIVIDAVNKSSAWVLSLD
VPSGLNPDTGSYTTAAIEADVTLTFGALKQGLLTGKARHNCGELLIAELGLTGYLPEPSATQIVCNQCIKALVPRKRDAH
KGDCGKVSVIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLIVSATRPELMFWGCELVDMEVYLRLGWASALVIGP
GLGTDDWGYNLLKAVDLSDKPCVIDADGLNLLKDMPMRQKDWILTPHPGEAARLLDISIEEIEQDRFKAVSLLHQEYGGV
IVLKGAGTLIYDGNKCVVAPVGNPGLASGGCGDVLAGVIGGLVAQGYSSMEAACLAVVIHGGAADLAARMGERGMLASDL
MPYIRQLVNEI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=233, Percent_Identity=32.1888412017167, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1790609, Length=490, Percent_Identity=43.6734693877551, Blast_Score=359, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17554656, Length=230, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357759, Length=273, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51465; Mature: 51333

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVHSLPTSLFLTEQVRTAELNAVNSGSVSLYQLVERAGAAAFQVISERQANTSRIVIL
CCCHHHCCCCEEEECCHHEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEE
AGHGNNGADAYVTATLLLEAGFCVKLQASTPSNPSDELTCAIHRFLEAGGEAVKFCGSQI
EECCCCCCCHHEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
AEAEVIVDGLLGTGITGELSAELAIVIDAVNKSSAWVLSLDVPSGLNPDTGSYTTAAIEA
HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEE
DVTLTFGALKQGLLTGKARHNCGELLIAELGLTGYLPEPSATQIVCNQCIKALVPRKRDA
EEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HKGDCGKVSVIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLIVSATRPELMFWGC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEECC
ELVDMEVYLRLGWASALVIGPGLGTDDWGYNLLKAVDLSDKPCVIDADGLNLLKDMPMRQ
EEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHEEECCCCCCEEEECCCHHHHHCCCCCC
KDWILTPHPGEAARLLDISIEEIEQDRFKAVSLLHQEYGGVIVLKGAGTLIYDGNKCVVA
CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCEEEEE
PVGNPGLASGGCGDVLAGVIGGLVAQGYSSMEAACLAVVIHGGAADLAARMGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCHHHHHHHCCCCCCHHHH
LMPYIRQLVNEI
HHHHHHHHHHCC
>Mature Secondary Structure 
SQVHSLPTSLFLTEQVRTAELNAVNSGSVSLYQLVERAGAAAFQVISERQANTSRIVIL
CCHHHCCCCEEEECCHHEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEE
AGHGNNGADAYVTATLLLEAGFCVKLQASTPSNPSDELTCAIHRFLEAGGEAVKFCGSQI
EECCCCCCCHHEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
AEAEVIVDGLLGTGITGELSAELAIVIDAVNKSSAWVLSLDVPSGLNPDTGSYTTAAIEA
HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEE
DVTLTFGALKQGLLTGKARHNCGELLIAELGLTGYLPEPSATQIVCNQCIKALVPRKRDA
EEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HKGDCGKVSVIGGDYGMAGAVRLAAEGCLRSGAGLVTVISRPEHQLIVSATRPELMFWGC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEECC
ELVDMEVYLRLGWASALVIGPGLGTDDWGYNLLKAVDLSDKPCVIDADGLNLLKDMPMRQ
EEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHEEECCCCCCEEEECCCHHHHHCCCCCC
KDWILTPHPGEAARLLDISIEEIEQDRFKAVSLLHQEYGGVIVLKGAGTLIYDGNKCVVA
CCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCEEEEE
PVGNPGLASGGCGDVLAGVIGGLVAQGYSSMEAACLAVVIHGGAADLAARMGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEEEECCHHHHHHHCCCCCCHHHH
LMPYIRQLVNEI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]