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The map label for this gene is ybeQ [C]

Identifier: 157963322

GI number: 157963322

Start: 4287870

End: 4288652

Strand: Reverse

Name: ybeQ [C]

Synonym: Spea_3508

Alternate gene names: 157963322

Gene position: 4288652-4287870 (Counterclockwise)

Preceding gene: 157963327

Following gene: 157963318

Centisome position: 82.88

GC content: 46.49

Gene sequence:

>783_bases
GTGAATTGTAGACCTTGGATTTTAAATACTGTTGTGGTCTTGTGTTTAGCTGTCAGCAGTGGAGCTAGTGCATTCTCGAT
CCCACAACCTAAAGGCGCCGAAGAAGCAAGCCGCCTCGCACATATTCAACTTAAAGCGACCCAGGGTGATGAAGATGCAC
AGTATCTGTTGGGTTTAATGTACTTATCTGGTCGTTTTGTCGCACAAGACAGAGACTTGGGGCTGCAGTGGCTCACAGAC
GCTGCCGAGCTTGGACATGCCAAAGCGCAGCAGACTATTGCCGATTTGGCATTTGAAGGTAGTCTCATCGAGCGAGATAT
TGCGACTGCCGAGCAGTGGTATAGCGAGTTAAGCAAACAGGGAAATAAGTGGGCTAATTTTAGACTCGGTTTTATTTATG
CCGCTGGCGGCCAAGGCATTGAGCGAAATTGTGGCAAGGCGGTCGAACAGTTTAACGCCGTGGGCGATATGATCTCTTTA
GGCAATGTGGCTTGGATTTTAGCGACCTGTCCAGAAGCACAATATCGTAACGGTAATAAAGCGCTAGAGTTATCCTTAGC
ATTGCTAGAATCAGATGAGCAAGACCCAACTAACTTAGATAACCTTGCTGCCGCTTATGCCGAAATTGGTGATTTCAACG
CAGCTATCTCGACTCAGCAGAAGGCGATTAAGGCACTTAACCTTAGTAAAGATCAAAGTAAAACAGCAGAGTTCAAGCAG
CGCCTTAAGACTTATCAAAATTACGAACCTTACCGTGAAGTCTTGCCGCTAACCGACAATTAG

Upstream 100 bases:

>100_bases
TCAAGCTTATTTCTGGCTAACTTGAGGCAGAATAATATTAAAGAGGCTGATGGCGATTGTTCATGTTTTCAGTCATTTTT
ATGAGTTGTAGGAGAGCGTC

Downstream 100 bases:

>100_bases
TTATTATTAGCTCCCATGAATAGAAAGCTCCTAAATAGGGGCTTTTTTTGTGTTTGAAAAACGCAAAGAGCAGCAGAGCA
AGCATGAAGGTGGAATTTGT

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; TPR Repeat Protein; Sodium-Type Flagellar Motor Component; Tetratricopeptide Repeat Family Protein; Signal Peptide; Sel1 Repeat-Containing Protein; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; Sel1-Like Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing SEL1 Subfamily Protein; Sel1-Like Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNCRPWILNTVVVLCLAVSSGASAFSIPQPKGAEEASRLAHIQLKATQGDEDAQYLLGLMYLSGRFVAQDRDLGLQWLTD
AAELGHAKAQQTIADLAFEGSLIERDIATAEQWYSELSKQGNKWANFRLGFIYAAGGQGIERNCGKAVEQFNAVGDMISL
GNVAWILATCPEAQYRNGNKALELSLALLESDEQDPTNLDNLAAAYAEIGDFNAAISTQQKAIKALNLSKDQSKTAEFKQ
RLKTYQNYEPYREVLPLTDN

Sequences:

>Translated_260_residues
MNCRPWILNTVVVLCLAVSSGASAFSIPQPKGAEEASRLAHIQLKATQGDEDAQYLLGLMYLSGRFVAQDRDLGLQWLTD
AAELGHAKAQQTIADLAFEGSLIERDIATAEQWYSELSKQGNKWANFRLGFIYAAGGQGIERNCGKAVEQFNAVGDMISL
GNVAWILATCPEAQYRNGNKALELSLALLESDEQDPTNLDNLAAAYAEIGDFNAAISTQQKAIKALNLSKDQSKTAEFKQ
RLKTYQNYEPYREVLPLTDN
>Mature_260_residues
MNCRPWILNTVVVLCLAVSSGASAFSIPQPKGAEEASRLAHIQLKATQGDEDAQYLLGLMYLSGRFVAQDRDLGLQWLTD
AAELGHAKAQQTIADLAFEGSLIERDIATAEQWYSELSKQGNKWANFRLGFIYAAGGQGIERNCGKAVEQFNAVGDMISL
GNVAWILATCPEAQYRNGNKALELSLALLESDEQDPTNLDNLAAAYAEIGDFNAAISTQQKAIKALNLSKDQSKTAEFKQ
RLKTYQNYEPYREVLPLTDN

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081769, Length=150, Percent_Identity=28.6666666666667, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28540; Mature: 28540

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCRPWILNTVVVLCLAVSSGASAFSIPQPKGAEEASRLAHIQLKATQGDEDAQYLLGLM
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHH
YLSGRFVAQDRDLGLQWLTDAAELGHAKAQQTIADLAFEGSLIERDIATAEQWYSELSKQ
HHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GNKWANFRLGFIYAAGGQGIERNCGKAVEQFNAVGDMISLGNVAWILATCPEAQYRNGNK
CCCEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHCCCCH
ALELSLALLESDEQDPTNLDNLAAAYAEIGDFNAAISTQQKAIKALNLSKDQSKTAEFKQ
HEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RLKTYQNYEPYREVLPLTDN
HHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure
MNCRPWILNTVVVLCLAVSSGASAFSIPQPKGAEEASRLAHIQLKATQGDEDAQYLLGLM
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHH
YLSGRFVAQDRDLGLQWLTDAAELGHAKAQQTIADLAFEGSLIERDIATAEQWYSELSKQ
HHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GNKWANFRLGFIYAAGGQGIERNCGKAVEQFNAVGDMISLGNVAWILATCPEAQYRNGNK
CCCEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHCCCCH
ALELSLALLESDEQDPTNLDNLAAAYAEIGDFNAAISTQQKAIKALNLSKDQSKTAEFKQ
HEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RLKTYQNYEPYREVLPLTDN
HHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA