Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963318

Identifier: 157963318

GI number: 157963318

Start: 4284204

End: 4284722

Strand: Reverse

Name: 157963318

Synonym: Spea_3504

Alternate gene names: NA

Gene position: 4284722-4284204 (Counterclockwise)

Preceding gene: 157963322

Following gene: 157963317

Centisome position: 82.8

GC content: 47.98

Gene sequence:

>519_bases
ATGGAGCGACGGACTTTTATCACAACCGCATTGGCAGGTACTGCATGCTTAGCGCTGGGCGTTAATTATTACTCGACCGA
TTATATCGGCGTTAATAAGCAGCTCGATGACAAGCACCGTTTGTTATTTAGTGTGCTGGTGCCAGTATTCTTAGATGGCG
CGCTACCCGATGTTGCTACGCTAAAACGCGATTCGATAAATAGAACTCTAGATGCTATCGAGCACACCATCTCCATTCTT
CCCCAAGACACCTTTGATGAACTGGAGCAACTGTTCGAGATGCTAGAGGGGCGGTTGGGACTGTTGATATTAACTGGCAG
CATGACGCCTTTGATGATGCGCAACCAGGCCGAACTGATAGAGATGCTACAAGCTTGGCGAACAAGCTATATGGACATGA
TGGTGACCGCCTACCAAGGACTAAGGGAGTTGGTGATGGCGAGTTACTACTCTAACCCAGAGCATTGGAGCCGACTGCAT
TATGCTAAGCCGACGTTCCTTGAAAATATGAAGTCTTGA

Upstream 100 bases:

>100_bases
GATTTTAAACTGGTCTTTTATTCGCTTTGTTTCCAGTTGTAAGTGGCTGGGCCGTGATGTTTTGCCGACACGAACTTAAT
TATAAGAATGAGAGGACTCG

Downstream 100 bases:

>100_bases
GGACATGAAGTGGTGCGATTAGTTAACTATCTAGCTTACGGCGCTAGCTCCGAGCGCTCTAGCCGTGAGCATTGGAGCCG
ACTGTATTATGCTAAACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL
PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH
YAKPTFLENMKS

Sequences:

>Translated_172_residues
MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL
PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH
YAKPTFLENMKS
>Mature_172_residues
MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL
PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH
YAKPTFLENMKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19720; Mature: 19720

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVAT
CCCHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
LKRDSINRTLDAIEHTISILPQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHH
EMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLHYAKPTFLENMKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVAT
CCCHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
LKRDSINRTLDAIEHTISILPQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHH
EMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLHYAKPTFLENMKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA