| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963318
Identifier: 157963318
GI number: 157963318
Start: 4284204
End: 4284722
Strand: Reverse
Name: 157963318
Synonym: Spea_3504
Alternate gene names: NA
Gene position: 4284722-4284204 (Counterclockwise)
Preceding gene: 157963322
Following gene: 157963317
Centisome position: 82.8
GC content: 47.98
Gene sequence:
>519_bases ATGGAGCGACGGACTTTTATCACAACCGCATTGGCAGGTACTGCATGCTTAGCGCTGGGCGTTAATTATTACTCGACCGA TTATATCGGCGTTAATAAGCAGCTCGATGACAAGCACCGTTTGTTATTTAGTGTGCTGGTGCCAGTATTCTTAGATGGCG CGCTACCCGATGTTGCTACGCTAAAACGCGATTCGATAAATAGAACTCTAGATGCTATCGAGCACACCATCTCCATTCTT CCCCAAGACACCTTTGATGAACTGGAGCAACTGTTCGAGATGCTAGAGGGGCGGTTGGGACTGTTGATATTAACTGGCAG CATGACGCCTTTGATGATGCGCAACCAGGCCGAACTGATAGAGATGCTACAAGCTTGGCGAACAAGCTATATGGACATGA TGGTGACCGCCTACCAAGGACTAAGGGAGTTGGTGATGGCGAGTTACTACTCTAACCCAGAGCATTGGAGCCGACTGCAT TATGCTAAGCCGACGTTCCTTGAAAATATGAAGTCTTGA
Upstream 100 bases:
>100_bases GATTTTAAACTGGTCTTTTATTCGCTTTGTTTCCAGTTGTAAGTGGCTGGGCCGTGATGTTTTGCCGACACGAACTTAAT TATAAGAATGAGAGGACTCG
Downstream 100 bases:
>100_bases GGACATGAAGTGGTGCGATTAGTTAACTATCTAGCTTACGGCGCTAGCTCCGAGCGCTCTAGCCGTGAGCATTGGAGCCG ACTGTATTATGCTAAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH YAKPTFLENMKS
Sequences:
>Translated_172_residues MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH YAKPTFLENMKS >Mature_172_residues MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVATLKRDSINRTLDAIEHTISIL PQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELIEMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLH YAKPTFLENMKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19720; Mature: 19720
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVAT CCCHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH LKRDSINRTLDAIEHTISILPQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHH EMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLHYAKPTFLENMKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MERRTFITTALAGTACLALGVNYYSTDYIGVNKQLDDKHRLLFSVLVPVFLDGALPDVAT CCCHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH LKRDSINRTLDAIEHTISILPQDTFDELEQLFEMLEGRLGLLILTGSMTPLMMRNQAELI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHH EMLQAWRTSYMDMMVTAYQGLRELVMASYYSNPEHWSRLHYAKPTFLENMKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA