| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963327
Identifier: 157963327
GI number: 157963327
Start: 4292335
End: 4293135
Strand: Reverse
Name: 157963327
Synonym: Spea_3513
Alternate gene names: NA
Gene position: 4293135-4292335 (Counterclockwise)
Preceding gene: 157963328
Following gene: 157963322
Centisome position: 82.97
GC content: 44.69
Gene sequence:
>801_bases ATGCACACGAATGTAAACACGCTATTTGAAGCACTTTGGCAAGACTATATCGAAATGACGCCATCGGCAGCTAAGGTTCA CCAGCTGCTGTCGAAAGGCAGTGCGATTATCAATGACCATATCGCACTTAGAACCTTTAATATTGCCAAGGTTAACCTTG AAGTATTAGCTAAGCATTTTGAGTCGATCGGCTATGTTGCCTGTGGTGACTACAAGTTTGAAGCTAAGAAGCTAAATGCT AAACATTTTGAGCACCCTGACAGTACACAGCCTAAAGTGTTTATCTCTGAGCTATTAGTCGAAGAGTTTAGTGATGAACT GCAATCAACCGTTAAGGGATTGATTGAGCAGATTGATACTGCTGCAACCACTGCCGACGATTTCTTGTATTCTGGTCGTC ACTGGGAGTTAGACACTAAGACCTATGAGGCCTTATTAGCTGAGAGTGAGTACGCTGCTTGGGTCGCAGCTTTTGGCTAT CGAGCTAACCACTTTACGGTGTCGATTAATCACCTAGCCGACTATGACACTATTTTTGAAGTGAACCATGCCTTAAAAGC GGCAGGCTTTGTGTTGAATGCATCTGGCGGTGAAGTGAAGGGCACACCTGAGGTGTTACTCGAGCAGTCATCAACTATGG CTGATAAGATCTCAGTTAGCTTCTCAGACGCTGTGATTAACATCCCTAGCTGTTTTTATGAGTTTGCATTGCGCTATCCT AAAGCGGATGGAGAGCTTTACACAGGCTTTGTGGCGGCCTCTGCTGACAAGATCTTCGAAAGTACTAACGTCAATGGCTA G
Upstream 100 bases:
>100_bases GACAAAACAAGCAAGCAGTATCCCTAAAACGTGTACAGCCGCGTGACCTAAATAGATAAATAAATAAGCAGGTAAACACG CTGGCGTAAAGGAGTGAATA
Downstream 100 bases:
>100_bases TATCTACGGATAGAGACAAAAAAGCCGGACAGAGTCCGGTTTTTTTATTGGCTGCTCATTATGGATAAAGATTAGAACAA TAACGTCACTTTTAGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHTNVNTLFEALWQDYIEMTPSAAKVHQLLSKGSAIINDHIALRTFNIAKVNLEVLAKHFESIGYVACGDYKFEAKKLNA KHFEHPDSTQPKVFISELLVEEFSDELQSTVKGLIEQIDTAATTADDFLYSGRHWELDTKTYEALLAESEYAAWVAAFGY RANHFTVSINHLADYDTIFEVNHALKAAGFVLNASGGEVKGTPEVLLEQSSTMADKISVSFSDAVINIPSCFYEFALRYP KADGELYTGFVAASADKIFESTNVNG
Sequences:
>Translated_266_residues MHTNVNTLFEALWQDYIEMTPSAAKVHQLLSKGSAIINDHIALRTFNIAKVNLEVLAKHFESIGYVACGDYKFEAKKLNA KHFEHPDSTQPKVFISELLVEEFSDELQSTVKGLIEQIDTAATTADDFLYSGRHWELDTKTYEALLAESEYAAWVAAFGY RANHFTVSINHLADYDTIFEVNHALKAAGFVLNASGGEVKGTPEVLLEQSSTMADKISVSFSDAVINIPSCFYEFALRYP KADGELYTGFVAASADKIFESTNVNG >Mature_266_residues MHTNVNTLFEALWQDYIEMTPSAAKVHQLLSKGSAIINDHIALRTFNIAKVNLEVLAKHFESIGYVACGDYKFEAKKLNA KHFEHPDSTQPKVFISELLVEEFSDELQSTVKGLIEQIDTAATTADDFLYSGRHWELDTKTYEALLAESEYAAWVAAFGY RANHFTVSINHLADYDTIFEVNHALKAAGFVLNASGGEVKGTPEVLLEQSSTMADKISVSFSDAVINIPSCFYEFALRYP KADGELYTGFVAASADKIFESTNVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29483; Mature: 29483
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTNVNTLFEALWQDYIEMTPSAAKVHQLLSKGSAIINDHIALRTFNIAKVNLEVLAKHF CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCEEEEEEEEHHHHHHHHHHHH ESIGYVACGDYKFEAKKLNAKHFEHPDSTQPKVFISELLVEEFSDELQSTVKGLIEQIDT HHCCEEEECCCEEHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATTADDFLYSGRHWELDTKTYEALLAESEYAAWVAAFGYRANHFTVSINHLADYDTIFE HHCCHHHHHCCCCCEEECHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH VNHALKAAGFVLNASGGEVKGTPEVLLEQSSTMADKISVSFSDAVINIPSCFYEFALRYP HHHHHHHHCEEEECCCCCCCCCHHHHHHCCCHHHHHEEEEECCCEEECHHHHHHHHHHCC KADGELYTGFVAASADKIFESTNVNG CCCCCEEEHEEHHHHHHHHHHCCCCC >Mature Secondary Structure MHTNVNTLFEALWQDYIEMTPSAAKVHQLLSKGSAIINDHIALRTFNIAKVNLEVLAKHF CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCEEEEEEEEHHHHHHHHHHHH ESIGYVACGDYKFEAKKLNAKHFEHPDSTQPKVFISELLVEEFSDELQSTVKGLIEQIDT HHCCEEEECCCEEHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATTADDFLYSGRHWELDTKTYEALLAESEYAAWVAAFGYRANHFTVSINHLADYDTIFE HHCCHHHHHCCCCCEEECHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH VNHALKAAGFVLNASGGEVKGTPEVLLEQSSTMADKISVSFSDAVINIPSCFYEFALRYP HHHHHHHHCEEEECCCCCCCCCHHHHHHCCCHHHHHEEEEECCCEEECHHHHHHHHHHCC KADGELYTGFVAASADKIFESTNVNG CCCCCEEEHEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA