| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963203
Identifier: 157963203
GI number: 157963203
Start: 4141616
End: 4142674
Strand: Reverse
Name: 157963203
Synonym: Spea_3388
Alternate gene names: NA
Gene position: 4142674-4141616 (Counterclockwise)
Preceding gene: 157963209
Following gene: 157963202
Centisome position: 80.06
GC content: 41.93
Gene sequence:
>1059_bases ATGCAGTTGGAAATCATGAAAGAATTTATCATTATAGGCGCCGGTCAGTCTGGCTTGTCTATGGCCTATAACTTGTCAAA ACATAATAAAGATTACTTAATCTTAGATGCCAACGAGCACATTGGTGCGCCTTGGTTAAAGCGTTGGGATTCACTTAAAC TGTTTACCCCTACCGAATATAACCATCTCCCTGGAATGCCGTTTCCGTTCCCGAAAGGCTATTACCCGAATAAGTATGAA GTGGCCGACTATCTAAAAAGTTATGCGGCGAAGTTTTCGATTCCCATTGAATTCAATCAAAAAATTATCTCAGTCAAGAA AGTTGATGGTATTTTTGAGATAAGCAGCAACACGGCCAGCTATCGAGCCAAACAGCTCATTGTCGCCACCGGCCCGTTTC ATACACCTTATACGCCGCCTTGTCATGTCGATATTGCTGAAGATATTACCCAGTTACACAGTGAGAATTATAAAAGCCCA GCACAGCTGCAAGAGGGGGACTGCTTAGTGGTTGGTGCAGGTGATTCTGGGGTGCAAATTTTATCTGAGATTGCCGATAC TGGACGTAAAGTTCACTTTTCTGGTACCGATAAAATCACCGCTATTCCGCAGTCATTTTTAGGTAAAACCCTATGGTGGT GGTTTACTAAGATAGGGTTTTTATCGGTTAACCGTTTTAGTAAAATAGGCAAATGGCTGAGCAAGGGCGTACAGCCCGTT ATTGGCACGGATGTGAAGTCACTGCTGGCAAAAGAAAATGTGATCCATATGGGCAGAACCTTGTCAGCCGATGCAACCAG TATTAAGTTTCAAAAAGGCAGTATTAGCAGCATCAAGAATATTATCTGGGCGACAGGTTTTAAACCTAACTTCTTTTGGA TTGATGATATCTCTTTCGATGAAATGAACTACCCGAGCAATTATCGCGGCGTTAGTAAAGACATAGATGGGCTCTATTTT ATTGGTCTACCTTGGTTATATACCCGTGGTTCAGCAACTCTCGGCGGGGTATGGAAAGATGCCAAATATCTGATGACTCA TATTTTAGAAAATAAATAA
Upstream 100 bases:
>100_bases ACCGAAAGCCTAGCTTTACAGTCAGGTGGTTGAGAGTTTCCTGCATTAGACAGGTTCGCTGCTCATCTTCTGTTAGAATG CTGCGCATAATAAAAACTAT
Downstream 100 bases:
>100_bases ACGTTATAACAAAGTCGCCAATGTTCAGAGCATCATTGGCGGCAATACACTACAACGGAACTTTTGACCGTTGGAATTAG CGAGATTTAATAACATTGTT
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MQLEIMKEFIIIGAGQSGLSMAYNLSKHNKDYLILDANEHIGAPWLKRWDSLKLFTPTEYNHLPGMPFPFPKGYYPNKYE VADYLKSYAAKFSIPIEFNQKIISVKKVDGIFEISSNTASYRAKQLIVATGPFHTPYTPPCHVDIAEDITQLHSENYKSP AQLQEGDCLVVGAGDSGVQILSEIADTGRKVHFSGTDKITAIPQSFLGKTLWWWFTKIGFLSVNRFSKIGKWLSKGVQPV IGTDVKSLLAKENVIHMGRTLSADATSIKFQKGSISSIKNIIWATGFKPNFFWIDDISFDEMNYPSNYRGVSKDIDGLYF IGLPWLYTRGSATLGGVWKDAKYLMTHILENK
Sequences:
>Translated_352_residues MQLEIMKEFIIIGAGQSGLSMAYNLSKHNKDYLILDANEHIGAPWLKRWDSLKLFTPTEYNHLPGMPFPFPKGYYPNKYE VADYLKSYAAKFSIPIEFNQKIISVKKVDGIFEISSNTASYRAKQLIVATGPFHTPYTPPCHVDIAEDITQLHSENYKSP AQLQEGDCLVVGAGDSGVQILSEIADTGRKVHFSGTDKITAIPQSFLGKTLWWWFTKIGFLSVNRFSKIGKWLSKGVQPV IGTDVKSLLAKENVIHMGRTLSADATSIKFQKGSISSIKNIIWATGFKPNFFWIDDISFDEMNYPSNYRGVSKDIDGLYF IGLPWLYTRGSATLGGVWKDAKYLMTHILENK >Mature_352_residues MQLEIMKEFIIIGAGQSGLSMAYNLSKHNKDYLILDANEHIGAPWLKRWDSLKLFTPTEYNHLPGMPFPFPKGYYPNKYE VADYLKSYAAKFSIPIEFNQKIISVKKVDGIFEISSNTASYRAKQLIVATGPFHTPYTPPCHVDIAEDITQLHSENYKSP AQLQEGDCLVVGAGDSGVQILSEIADTGRKVHFSGTDKITAIPQSFLGKTLWWWFTKIGFLSVNRFSKIGKWLSKGVQPV IGTDVKSLLAKENVIHMGRTLSADATSIKFQKGSISSIKNIIWATGFKPNFFWIDDISFDEMNYPSNYRGVSKDIDGLYF IGLPWLYTRGSATLGGVWKDAKYLMTHILENK
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 39602; Mature: 39602
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLEIMKEFIIIGAGQSGLSMAYNLSKHNKDYLILDANEHIGAPWLKRWDSLKLFTPTEY CCHHHEEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCEEEECCCCC NHLPGMPFPFPKGYYPNKYEVADYLKSYAAKFSIPIEFNQKIISVKKVDGIFEISSNTAS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECEEECCCEEEEEEECCCEEEECCCCHH YRAKQLIVATGPFHTPYTPPCHVDIAEDITQLHSENYKSPAQLQEGDCLVVGAGDSGVQI HHEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHH LSEIADTGRKVHFSGTDKITAIPQSFLGKTLWWWFTKIGFLSVNRFSKIGKWLSKGVQPV HHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGTDVKSLLAKENVIHMGRTLSADATSIKFQKGSISSIKNIIWATGFKPNFFWIDDISFD CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHEECCCCCCEEEEECCCCC EMNYPSNYRGVSKDIDGLYFIGLPWLYTRGSATLGGVWKDAKYLMTHILENK CCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQLEIMKEFIIIGAGQSGLSMAYNLSKHNKDYLILDANEHIGAPWLKRWDSLKLFTPTEY CCHHHEEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCEEEECCCCC NHLPGMPFPFPKGYYPNKYEVADYLKSYAAKFSIPIEFNQKIISVKKVDGIFEISSNTAS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECEEECCCEEEEEEECCCEEEECCCCHH YRAKQLIVATGPFHTPYTPPCHVDIAEDITQLHSENYKSPAQLQEGDCLVVGAGDSGVQI HHEEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHH LSEIADTGRKVHFSGTDKITAIPQSFLGKTLWWWFTKIGFLSVNRFSKIGKWLSKGVQPV HHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGTDVKSLLAKENVIHMGRTLSADATSIKFQKGSISSIKNIIWATGFKPNFFWIDDISFD CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHEECCCCCCEEEEECCCCC EMNYPSNYRGVSKDIDGLYFIGLPWLYTRGSATLGGVWKDAKYLMTHILENK CCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA