Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963209

Identifier: 157963209

GI number: 157963209

Start: 4149053

End: 4150357

Strand: Reverse

Name: 157963209

Synonym: Spea_3394

Alternate gene names: NA

Gene position: 4150357-4149053 (Counterclockwise)

Preceding gene: 157963210

Following gene: 157963203

Centisome position: 80.21

GC content: 44.52

Gene sequence:

>1305_bases
ATGACTGTAAAAAAATGGACTCTAACGGCAATCTCTGCGCTGGCTATAACGGCTTGTGGTGGAGGCGGAGATGACTCCGG
CTCTAGCGATAATGGAGGTTCGTCTAGCGGAAATGTACCGAAAATCACTTTAAATACTGTTGTAAGTAATTGGTGTGGAA
TTGAAAAACCTAAATCTGGAGTCGATGTATTTGTGCACAACAATGCCGGTGATATTATTGCTGAGTACGTTACTGATGGT
GATGGCGCGCTCACAGCTGATTGGCCGAGTAACGCTAAACACCTCACACTAACTGCAAATAATCAGTCTTATTACAAAGA
CCTGCCTACTCTTACTGTTATCTCTAATGTTGCCGTTGAAGCAGGCGATCAAGGTATTACACATTTTTGGGATGATAACG
ATCAAGCAGGTTGTGATTGTAAGTATGTTGAGTTTCCTGTGCAGTCACTTATTACTGATGCGCCTGATAGCATGCTTTAT
CTAGGAGGCACCAGTCATGAGTTAACGCCATTTACGAGCTCGCTCTCAGTGGAGTGGTGTGATGGTGCTGGCCCAATAGA
TGTGCAGTTAGTGGCTGCTGATGGTCAGAGCAGCCTAGCTGGCAGTATTGATTTGGCCGATAAAACAGAATATACATTGA
GCATGAGTGACTTCACTCATGAAGGTGTTGCAGTTGATTATGTTAATCCATATGACGCACGGATCTTATATGCCCGTTCA
TTTGAAGGCTGGACCAATTTTAGCCAAGACGATTTAGTTTTTGTCTATCCAACATTAACCGATAGTAGTTATGTTTGGCC
TGCAAGAATGGGTCAAGAATACGTAGGTAATGTGGCAGCTGATAGTTATAGCTCTGCACGACACCGAGTCAACTCCGAGG
GAAAGACCTCTCCGATTATGCTGTGGGATCCAGCTAACGGTTATTCTGATGCGGTTTACGCATTATTCAGCGAAATATCC
ACAGGTAAAGCGCCCTACGATTATGATTTCAGGGGGGTGAGCAATGTAGCGTTGACTCACATGACTTTATCGGGGGATCT
TGATAATGGTGACGCCGAATGGACTATTTGGGGCGGCGCATCAGGCAGTATGCCAGATCTCAAATTGCCAGCCGCTTTGG
ATGCAAGGTTTGATTCTCTTTATTACGCTAGATTACAGATAGGTGTTAGAGGTTATGGCTCTGAAAAGCCATTAAGCGAA
TGGCGTAAATTGCTAGTAGAAAGAAACCGTATGGATGAGAGAGGCACAAGCGCGCTCGATTATGAAACTAATTATATGCG
TCTGAGTTTCGACCTAGAGCAGTAG

Upstream 100 bases:

>100_bases
TCACGACTATATAGGCAAAACCGTTGTTGTCAGAATGCAGTGATAAAGAATAGGTTCAAAATTTAACTTCAATAAATCCA
AACATATTCAGGAAGAAGAT

Downstream 100 bases:

>100_bases
TCTTATGTAAGACCTCGTGCCAAATAGGTTTTAATTATGGCCGTAAAAACAAAAAGACAGCGCAAGCTGTCTTTTTTATG
TTTAGTGGTTTAAGCGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTVKKWTLTAISALAITACGGGGDDSGSSDNGGSSSGNVPKITLNTVVSNWCGIEKPKSGVDVFVHNNAGDIIAEYVTDG
DGALTADWPSNAKHLTLTANNQSYYKDLPTLTVISNVAVEAGDQGITHFWDDNDQAGCDCKYVEFPVQSLITDAPDSMLY
LGGTSHELTPFTSSLSVEWCDGAGPIDVQLVAADGQSSLAGSIDLADKTEYTLSMSDFTHEGVAVDYVNPYDARILYARS
FEGWTNFSQDDLVFVYPTLTDSSYVWPARMGQEYVGNVAADSYSSARHRVNSEGKTSPIMLWDPANGYSDAVYALFSEIS
TGKAPYDYDFRGVSNVALTHMTLSGDLDNGDAEWTIWGGASGSMPDLKLPAALDARFDSLYYARLQIGVRGYGSEKPLSE
WRKLLVERNRMDERGTSALDYETNYMRLSFDLEQ

Sequences:

>Translated_434_residues
MTVKKWTLTAISALAITACGGGGDDSGSSDNGGSSSGNVPKITLNTVVSNWCGIEKPKSGVDVFVHNNAGDIIAEYVTDG
DGALTADWPSNAKHLTLTANNQSYYKDLPTLTVISNVAVEAGDQGITHFWDDNDQAGCDCKYVEFPVQSLITDAPDSMLY
LGGTSHELTPFTSSLSVEWCDGAGPIDVQLVAADGQSSLAGSIDLADKTEYTLSMSDFTHEGVAVDYVNPYDARILYARS
FEGWTNFSQDDLVFVYPTLTDSSYVWPARMGQEYVGNVAADSYSSARHRVNSEGKTSPIMLWDPANGYSDAVYALFSEIS
TGKAPYDYDFRGVSNVALTHMTLSGDLDNGDAEWTIWGGASGSMPDLKLPAALDARFDSLYYARLQIGVRGYGSEKPLSE
WRKLLVERNRMDERGTSALDYETNYMRLSFDLEQ
>Mature_433_residues
TVKKWTLTAISALAITACGGGGDDSGSSDNGGSSSGNVPKITLNTVVSNWCGIEKPKSGVDVFVHNNAGDIIAEYVTDGD
GALTADWPSNAKHLTLTANNQSYYKDLPTLTVISNVAVEAGDQGITHFWDDNDQAGCDCKYVEFPVQSLITDAPDSMLYL
GGTSHELTPFTSSLSVEWCDGAGPIDVQLVAADGQSSLAGSIDLADKTEYTLSMSDFTHEGVAVDYVNPYDARILYARSF
EGWTNFSQDDLVFVYPTLTDSSYVWPARMGQEYVGNVAADSYSSARHRVNSEGKTSPIMLWDPANGYSDAVYALFSEIST
GKAPYDYDFRGVSNVALTHMTLSGDLDNGDAEWTIWGGASGSMPDLKLPAALDARFDSLYYARLQIGVRGYGSEKPLSEW
RKLLVERNRMDERGTSALDYETNYMRLSFDLEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47095; Mature: 46964

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKKWTLTAISALAITACGGGGDDSGSSDNGGSSSGNVPKITLNTVVSNWCGIEKPKSG
CCCEEEHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCC
VDVFVHNNAGDIIAEYVTDGDGALTADWPSNAKHLTLTANNQSYYKDLPTLTVISNVAVE
CEEEEECCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCCHHHHCCCCEEEHHHHHEE
AGDQGITHFWDDNDQAGCDCKYVEFPVQSLITDAPDSMLYLGGTSHELTPFTSSLSVEWC
CCCCCCEEEECCCCCCCCCEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEE
DGAGPIDVQLVAADGQSSLAGSIDLADKTEYTLSMSDFTHEGVAVDYVNPYDARILYARS
CCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEC
FEGWTNFSQDDLVFVYPTLTDSSYVWPARMGQEYVGNVAADSYSSARHRVNSEGKTSPIM
CCCCCCCCCCCEEEEEEECCCCCEECHHHHCHHHHCCHHCCCHHHHHHHCCCCCCCCCEE
LWDPANGYSDAVYALFSEISTGKAPYDYDFRGVSNVALTHMTLSGDLDNGDAEWTIWGGA
EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECC
SGSMPDLKLPAALDARFDSLYYARLQIGVRGYGSEKPLSEWRKLLVERNRMDERGTSALD
CCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
YETNYMRLSFDLEQ
ECCCEEEEEEEECC
>Mature Secondary Structure 
TVKKWTLTAISALAITACGGGGDDSGSSDNGGSSSGNVPKITLNTVVSNWCGIEKPKSG
CCEEEHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCC
VDVFVHNNAGDIIAEYVTDGDGALTADWPSNAKHLTLTANNQSYYKDLPTLTVISNVAVE
CEEEEECCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCCHHHHCCCCEEEHHHHHEE
AGDQGITHFWDDNDQAGCDCKYVEFPVQSLITDAPDSMLYLGGTSHELTPFTSSLSVEWC
CCCCCCEEEECCCCCCCCCEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEE
DGAGPIDVQLVAADGQSSLAGSIDLADKTEYTLSMSDFTHEGVAVDYVNPYDARILYARS
CCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEC
FEGWTNFSQDDLVFVYPTLTDSSYVWPARMGQEYVGNVAADSYSSARHRVNSEGKTSPIM
CCCCCCCCCCCEEEEEEECCCCCEECHHHHCHHHHCCHHCCCHHHHHHHCCCCCCCCCEE
LWDPANGYSDAVYALFSEISTGKAPYDYDFRGVSNVALTHMTLSGDLDNGDAEWTIWGGA
EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECC
SGSMPDLKLPAALDARFDSLYYARLQIGVRGYGSEKPLSEWRKLLVERNRMDERGTSALD
CCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
YETNYMRLSFDLEQ
ECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA