| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fabZ [H]
Identifier: 157962693
GI number: 157962693
Start: 3511806
End: 3512303
Strand: Reverse
Name: fabZ [H]
Synonym: Spea_2874
Alternate gene names: 157962693
Gene position: 3512303-3511806 (Counterclockwise)
Preceding gene: 157962694
Following gene: 157962692
Centisome position: 67.88
GC content: 42.77
Gene sequence:
>498_bases ATGAATGACTGCAGTGAGCAGATAAAGGAAAAATTCGTGTCAAATCAATTGAATACAATGGATATTAAAGAGATCCTAAA ATTTTTACCTCATAGGTATCCATTTTTATTGATCGATAGAGTGCTAGATTTCACTCCAGGTGAAACCCTACATGCCATTA AGAACGTCACCATCAATGAGCCATTTTTTCAGGGACACTTCCCGGTTCAGCCTGTGATGCCTGGTGTACTGATTTTAGAA GCGATGGCACAGGCAACTGGCTTGTTGGCTTTTAAAACCATGAGTGAAGAGCCGTCTAATGACGCGTTATACTATTTCGC CGGAATCGACAAAGCGCGTTTTAAGCGTGTAGTTGAACCAGGTGACCAACTTCATTTTGAAGTGCAAATGATTAAAGAGC GCCGCGGGATTGGCGTGTTTACTGGCGTTGCTAAAGTGGATGGCGAGGTAGTTTGTTCAGCCGAGATCATGTGTGCACGT AGAGAGATTTCTAAGTGA
Upstream 100 bases:
>100_bases TGCGATGGATAATAAGCTTTGGCGTAAGAATACCGTGCGTTTTAGACAGTTAGATACGCTATTCCAACGTGTGAAAACAC TGGAAAATAACGTAAAGTAA
Downstream 100 bases:
>100_bases TTGATAAATTAGCTTACATCCACCCAGATGCCAAGATTGGCAACAATGTGACGATCGGTCCTTGGACTTATATCGGTGCT GACGTTGAGATTGGTGATGA
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNDCSEQIKEKFVSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILE AMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEVVCSAEIMCAR REISK
Sequences:
>Translated_165_residues MNDCSEQIKEKFVSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILE AMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEVVCSAEIMCAR REISK >Mature_165_residues MNDCSEQIKEKFVSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILE AMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEVVCSAEIMCAR REISK
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=149, Percent_Identity=63.758389261745, Blast_Score=194, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 18693; Mature: 18693
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDCSEQIKEKFVSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINE CCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCC PFFQGHFPVQPVMPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCC GDQLHFEVQMIKERRGIGVFTGVAKVDGEVVCSAEIMCARREISK CCHHHHHHHHHHHHCCCEEEEHHHHCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure MNDCSEQIKEKFVSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINE CCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCC PFFQGHFPVQPVMPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCC GDQLHFEVQMIKERRGIGVFTGVAKVDGEVVCSAEIMCARREISK CCHHHHHHHHHHHHCCCEEEEHHHHCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA