The gene/protein map for NC_009901 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962655

Identifier: 157962655

GI number: 157962655

Start: 3460066

End: 3461265

Strand: Reverse

Name: 157962655

Synonym: Spea_2835

Alternate gene names: NA

Gene position: 3461265-3460066 (Counterclockwise)

Preceding gene: 157962658

Following gene: 157962646

Centisome position: 66.89

GC content: 38.58

Gene sequence:

>1200_bases
ATGTCGAAACTTATCCTTGGCTTTACAATTTTATATTACTTGTTTGTTAGTTGCGTACTTGCTCACGAAATTGAACAGAG
CTCGACATCACTAGATTTAGTTCATACCTTCACCTTAGAGGATGGTATCTTTAATAGCGAAACTGGCACTATTGAGCGCT
ATACTGCTCACTATACCAATATTGCAATTCCTAAAAGTCTTGGCGGCATACCGGTTATCGCTATCGGGGCGAACTCATTT
AGCCAGTCAGGTTTAACAAGCGTGTCGCTCCCTATAACTATTGGTTCTATTGGGATGAATGCGTTTACGCAAAATAAGAT
CGTGAGTCTAATCATTCCTGACTCTGTCATGTATATAGGTTCTGGAGCCTTTTCAAGAAATGGATTGGAGAATGTGACCA
TCTCTAACTCCATAACTACCATCAGAAAGTGGACGTTTTCAGAAAATGCGTTAACAAACGTTAGGATCCCTGACTCGGTA
ATTGATATTGAAAATTGGGCATTCAGGAATAATGATTTAATAAAATTGCACATTCCAAATGGCGTCGTTTCAATTGGTGG
AGGATCGTTTGCACATAATAAGTTAACCGAACTCACTTTTTCTGACTCTGTCACTTCCATAGGTGGTAGTGCGTTTACTA
ATAATGCAATAAAAAAGGTCGATATCCCAAGTTCAGTTACTTTTCTCGGTAATGGGGCCTTCTACGCCAATTCGTTGACA
AGTGTGATAATACCAAACTCCATCACATCGATTGGTAATGAGGTATTTTATAGCAATAAATTAAACAGTGTGACAATCCC
TGATTCGGTCACCTCAATTGGAAGAAGTGCATTTGCAGTTAATTTAATTACATCTATTGACTTGCCAAAGACTCTTACTT
CATTAGGTGATAGTGCTTTTTCATCCAATGCCTTGACAGCGGTGAGCATACCAAACTCTATCTCTACCATTGGTGAGTTT
GTGTTTTTTAAGAATTCCTTAACAACGCTAACCATCCCTAACTCAGTGGCTTCGATTGGTTCAAGTGCATTTGAAAAAAA
CGCACTTACCAAAGTAACCATCCCTAATTCAGTGACTTCGATTGCTTCTGGTGCATTTGAGAAAAACGCAATTACCAACG
TAACTATTCCGTTATCGGTTACTCAATTAGATGAAAAAGCATTCGATAGGAAGGTTCAAATAACAAAGTCCAACGAGTAA

Upstream 100 bases:

>100_bases
AAAGTGAAAACTAGCATTATCTTGTTGATTTATAATAGAGGGCTTAATATATCCCTCCAATCCAATTATTTTACAGCTTT
TGTATTTATAGCAGGTAATT

Downstream 100 bases:

>100_bases
AAATAACGGGGCCATATTTGGTCCCCGTATTGCCAGACAAGGGTGGTATTACTGGTCATATATGCTTTAAGACGATGACT
TTTATCAAGGCTTATCATGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Cell Surface Leucine-Rich Repeat-Containing Protein; Surface Protein; Surface Antigen BspA; Fibronectin Type III Domain-Containing Protein; Type 1 Dockerin; Surface Antigen BspA Like Protein; TPR Repeat-Containing Protein; Adhesion Exoprotein; Leucine-Rich Repeat-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Ig Domain Domain Protein; Cell Surface Antigen; Lipoprotein; Surface Antigen BspA-Like Protein; Peptidoglycan Bound Protein; SEC-C Motif Domain Protein; Surface Antigen; Fibronectin Type III Domain Protein; Leucine Rich Repeat Domain-Containing Protein; Leucine Rich Repeat Domain Protein; N-Acetylmuramoyl-L-Alanine Amidase; Surface-Anchored Antigen BspA-Like Protein; Subtilisin-Like Serine Protease; Ig Domain Protein; Transglutaminase Domain-Containing Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSKLILGFTILYYLFVSCVLAHEIEQSSTSLDLVHTFTLEDGIFNSETGTIERYTAHYTNIAIPKSLGGIPVIAIGANSF
SQSGLTSVSLPITIGSIGMNAFTQNKIVSLIIPDSVMYIGSGAFSRNGLENVTISNSITTIRKWTFSENALTNVRIPDSV
IDIENWAFRNNDLIKLHIPNGVVSIGGGSFAHNKLTELTFSDSVTSIGGSAFTNNAIKKVDIPSSVTFLGNGAFYANSLT
SVIIPNSITSIGNEVFYSNKLNSVTIPDSVTSIGRSAFAVNLITSIDLPKTLTSLGDSAFSSNALTAVSIPNSISTIGEF
VFFKNSLTTLTIPNSVASIGSSAFEKNALTKVTIPNSVTSIASGAFEKNAITNVTIPLSVTQLDEKAFDRKVQITKSNE

Sequences:

>Translated_399_residues
MSKLILGFTILYYLFVSCVLAHEIEQSSTSLDLVHTFTLEDGIFNSETGTIERYTAHYTNIAIPKSLGGIPVIAIGANSF
SQSGLTSVSLPITIGSIGMNAFTQNKIVSLIIPDSVMYIGSGAFSRNGLENVTISNSITTIRKWTFSENALTNVRIPDSV
IDIENWAFRNNDLIKLHIPNGVVSIGGGSFAHNKLTELTFSDSVTSIGGSAFTNNAIKKVDIPSSVTFLGNGAFYANSLT
SVIIPNSITSIGNEVFYSNKLNSVTIPDSVTSIGRSAFAVNLITSIDLPKTLTSLGDSAFSSNALTAVSIPNSISTIGEF
VFFKNSLTTLTIPNSVASIGSSAFEKNALTKVTIPNSVTSIASGAFEKNAITNVTIPLSVTQLDEKAFDRKVQITKSNE
>Mature_398_residues
SKLILGFTILYYLFVSCVLAHEIEQSSTSLDLVHTFTLEDGIFNSETGTIERYTAHYTNIAIPKSLGGIPVIAIGANSFS
QSGLTSVSLPITIGSIGMNAFTQNKIVSLIIPDSVMYIGSGAFSRNGLENVTISNSITTIRKWTFSENALTNVRIPDSVI
DIENWAFRNNDLIKLHIPNGVVSIGGGSFAHNKLTELTFSDSVTSIGGSAFTNNAIKKVDIPSSVTFLGNGAFYANSLTS
VIIPNSITSIGNEVFYSNKLNSVTIPDSVTSIGRSAFAVNLITSIDLPKTLTSLGDSAFSSNALTAVSIPNSISTIGEFV
FFKNSLTTLTIPNSVASIGSSAFEKNALTKVTIPNSVTSIASGAFEKNAITNVTIPLSVTQLDEKAFDRKVQITKSNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42426; Mature: 42294

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLILGFTILYYLFVSCVLAHEIEQSSTSLDLVHTFTLEDGIFNSETGTIERYTAHYTN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEE
IAIPKSLGGIPVIAIGANSFSQSGLTSVSLPITIGSIGMNAFTQNKIVSLIIPDSVMYIG
EECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEE
SGAFSRNGLENVTISNSITTIRKWTFSENALTNVRIPDSVIDIENWAFRNNDLIKLHIPN
CCCCCCCCCCCEEECCCEEEEEEEEECCCCEEEEECCCCEEECCCCEECCCCEEEEECCC
GVVSIGGGSFAHNKLTELTFSDSVTSIGGSAFTNNAIKKVDIPSSVTFLGNGAFYANSLT
CEEEECCCCCCCCCEEEEEECCCHHHCCCCHHCCCCEEEECCCCCEEEEECCEEEECCCE
SVIIPNSITSIGNEVFYSNKLNSVTIPDSVTSIGRSAFAVNLITSIDLPKTLTSLGDSAF
EEEECCCHHHHCCCEEECCCCCEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCC
SSNALTAVSIPNSISTIGEFVFFKNSLTTLTIPNSVASIGSSAFEKNALTKVTIPNSVTS
CCCCEEEEECCCHHHHHHHHEEEECCEEEEEECCHHHHHCCHHHHCCCEEEEECCCCHHH
IASGAFEKNAITNVTIPLSVTQLDEKAFDRKVQITKSNE
HHCCCCCCCCEEEEEEEEEEEHHHHHHCCCEEEEEECCC
>Mature Secondary Structure 
SKLILGFTILYYLFVSCVLAHEIEQSSTSLDLVHTFTLEDGIFNSETGTIERYTAHYTN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEE
IAIPKSLGGIPVIAIGANSFSQSGLTSVSLPITIGSIGMNAFTQNKIVSLIIPDSVMYIG
EECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEE
SGAFSRNGLENVTISNSITTIRKWTFSENALTNVRIPDSVIDIENWAFRNNDLIKLHIPN
CCCCCCCCCCCEEECCCEEEEEEEEECCCCEEEEECCCCEEECCCCEECCCCEEEEECCC
GVVSIGGGSFAHNKLTELTFSDSVTSIGGSAFTNNAIKKVDIPSSVTFLGNGAFYANSLT
CEEEECCCCCCCCCEEEEEECCCHHHCCCCHHCCCCEEEECCCCCEEEEECCEEEECCCE
SVIIPNSITSIGNEVFYSNKLNSVTIPDSVTSIGRSAFAVNLITSIDLPKTLTSLGDSAF
EEEECCCHHHHCCCEEECCCCCEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCC
SSNALTAVSIPNSISTIGEFVFFKNSLTTLTIPNSVASIGSSAFEKNALTKVTIPNSVTS
CCCCEEEEECCCHHHHHHHHEEEECCEEEEEECCHHHHHCCHHHHCCCEEEEECCCCHHH
IASGAFEKNAITNVTIPLSVTQLDEKAFDRKVQITKSNE
HHCCCCCCCCEEEEEEEEEEEHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA