| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962646
Identifier: 157962646
GI number: 157962646
Start: 3449144
End: 3450406
Strand: Reverse
Name: 157962646
Synonym: Spea_2826
Alternate gene names: NA
Gene position: 3450406-3449144 (Counterclockwise)
Preceding gene: 157962655
Following gene: 157962645
Centisome position: 66.68
GC content: 49.25
Gene sequence:
>1263_bases ATGCTTAGCGAACCTTTTTACGGCCACTATCTTGCCAGTTTGCAAAAGCAGTTGATGAGTAAAGGCGACACAAATGCGTC AGTTCTTGAGCCAGTCTTAGAAATCGTCTTGCATGGCGCCAGTGATGTCGCTTTAGTTTGCCATTCACAACGTTGGCAGG CCTTAAGCCTACAGCAGCAGGTGGGGGCGCTTAAACATGAGGCGCTTCACTTAGTGCTAGGGCATATTTTTCAGCGTAAT TGCTATGTAGATAAACGCAGATTTGATCTGGCGGCCGACTTGGTAGTGAATCAATATCTGTCTCCGCAGCAGCTGTTACC GAACGCAATCACCCTCGATGGCGTCAATCAATATCGTCAGGCGCACAATCTGCCAAGGCTCGAGCCTCTGCGTGAACTGA ATTATTACTATCAGGCGCTAATGGTACAAGGTATAGCGGCTCAAGGATTAGCGGCTCAAGGCTTAGTGGATCAGAGTTTA GCAGCTCTGCCATTGGATAACTCAGGGGGGTCATCGAATCAACTAGAGCTGAGTCGGCATCAATCGTGGGGGTATTTTGG CAAGCAAACACAGGCGCAGAACGGATTGATTGAGCAACAATTGGCAGGCAAGTTAGACACTGCCGCCCAACGCACTGAGA TGAGCAATGGCATCGGTAATCTACCGGCTGCGATAGTGGCGATGTTGGAGCAAGTTCGCCAGGCTCGCAACCCTGTGCTT AATTGGCGGCGGGCACTGAGATTGTTCGCATCATCGAGCCGCCGCACGTCAGTAAAAAACACCCTAAGACGCCCCTCTAA ACGTTATGGCACTACGCCTGGGATTAAAATCCAGCAACACCAAAGGCTGTTGATAGCCATCGATACATCAGCAAGCGTCG ATGATGAGCAGTTGCAGCTATTTTTTGAAGAGGTGCACCATATCTGGCGCGCAGGCTGCGAGATCACCATTGCTGAGTGT GATACCGAGTTAAAACGCCAATATCAGTACCGCGGGATAGCGCCTGATAAGATAACTGGCCGTGGCGGTACCAGTTTCGA TGAGCCTATTTTATTGGCAAATCAGCAAAGATTTGATGGCACCATTTATTTTACCGATGGCGAGGCTCTAGCCCCGACAA CCTTACCCCGTAAGCCGTTACTTTGGCTTATTCACAGTGAGTCATTTTTAGGTGATCGCGACAAACAGGCCTTTGAACAT CTAAAACAATCTGGCCGTGTCATTCCCATGTCCATATCTACATCTAAGGTAAGCAAGCATTAG
Upstream 100 bases:
>100_bases CAATTGACGGGCGGGAAATTATATGGATAATCCCTTGAAAATAATATGGTTATAAGGCAAAACTTTGAAGTCGTCACTGT CTAAAGCAGGCGTTACCCTG
Downstream 100 bases:
>100_bases GTTAACTTATGAATACAGCTCAATATCAGTACTACGGCCTAAGCTGCCAAGCACAAGAAGTGCGCCCCTTTATCGAACAC CTACTAAGCAATGATACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MLSEPFYGHYLASLQKQLMSKGDTNASVLEPVLEIVLHGASDVALVCHSQRWQALSLQQQVGALKHEALHLVLGHIFQRN CYVDKRRFDLAADLVVNQYLSPQQLLPNAITLDGVNQYRQAHNLPRLEPLRELNYYYQALMVQGIAAQGLAAQGLVDQSL AALPLDNSGGSSNQLELSRHQSWGYFGKQTQAQNGLIEQQLAGKLDTAAQRTEMSNGIGNLPAAIVAMLEQVRQARNPVL NWRRALRLFASSSRRTSVKNTLRRPSKRYGTTPGIKIQQHQRLLIAIDTSASVDDEQLQLFFEEVHHIWRAGCEITIAEC DTELKRQYQYRGIAPDKITGRGGTSFDEPILLANQQRFDGTIYFTDGEALAPTTLPRKPLLWLIHSESFLGDRDKQAFEH LKQSGRVIPMSISTSKVSKH
Sequences:
>Translated_420_residues MLSEPFYGHYLASLQKQLMSKGDTNASVLEPVLEIVLHGASDVALVCHSQRWQALSLQQQVGALKHEALHLVLGHIFQRN CYVDKRRFDLAADLVVNQYLSPQQLLPNAITLDGVNQYRQAHNLPRLEPLRELNYYYQALMVQGIAAQGLAAQGLVDQSL AALPLDNSGGSSNQLELSRHQSWGYFGKQTQAQNGLIEQQLAGKLDTAAQRTEMSNGIGNLPAAIVAMLEQVRQARNPVL NWRRALRLFASSSRRTSVKNTLRRPSKRYGTTPGIKIQQHQRLLIAIDTSASVDDEQLQLFFEEVHHIWRAGCEITIAEC DTELKRQYQYRGIAPDKITGRGGTSFDEPILLANQQRFDGTIYFTDGEALAPTTLPRKPLLWLIHSESFLGDRDKQAFEH LKQSGRVIPMSISTSKVSKH >Mature_420_residues MLSEPFYGHYLASLQKQLMSKGDTNASVLEPVLEIVLHGASDVALVCHSQRWQALSLQQQVGALKHEALHLVLGHIFQRN CYVDKRRFDLAADLVVNQYLSPQQLLPNAITLDGVNQYRQAHNLPRLEPLRELNYYYQALMVQGIAAQGLAAQGLVDQSL AALPLDNSGGSSNQLELSRHQSWGYFGKQTQAQNGLIEQQLAGKLDTAAQRTEMSNGIGNLPAAIVAMLEQVRQARNPVL NWRRALRLFASSSRRTSVKNTLRRPSKRYGTTPGIKIQQHQRLLIAIDTSASVDDEQLQLFFEEVHHIWRAGCEITIAEC DTELKRQYQYRGIAPDKITGRGGTSFDEPILLANQQRFDGTIYFTDGEALAPTTLPRKPLLWLIHSESFLGDRDKQAFEH LKQSGRVIPMSISTSKVSKH
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 47066; Mature: 47066
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEPFYGHYLASLQKQLMSKGDTNASVLEPVLEIVLHGASDVALVCHSQRWQALSLQQQ CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH VGALKHEALHLVLGHIFQRNCYVDKRRFDLAADLVVNQYLSPQQLLPNAITLDGVNQYRQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEECCHHHHHH AHNLPRLEPLRELNYYYQALMVQGIAAQGLAAQGLVDQSLAALPLDNSGGSSNQLELSRH HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHC QSWGYFGKQTQAQNGLIEQQLAGKLDTAAQRTEMSNGIGNLPAAIVAMLEQVRQARNPVL CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH NWRRALRLFASSSRRTSVKNTLRRPSKRYGTTPGIKIQQHQRLLIAIDTSASVDDEQLQL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCEEECCCEEEEEEECCCCCCHHHHHH FFEEVHHIWRAGCEITIAECDTELKRQYQYRGIAPDKITGRGGTSFDEPILLANQQRFDG HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCC TIYFTDGEALAPTTLPRKPLLWLIHSESFLGDRDKQAFEHLKQSGRVIPMSISTSKVSKH EEEEECCCEECCCCCCCCCEEEEEECCHHCCCCHHHHHHHHHHCCCEEEEECCHHHHCCC >Mature Secondary Structure MLSEPFYGHYLASLQKQLMSKGDTNASVLEPVLEIVLHGASDVALVCHSQRWQALSLQQQ CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH VGALKHEALHLVLGHIFQRNCYVDKRRFDLAADLVVNQYLSPQQLLPNAITLDGVNQYRQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEECCHHHHHH AHNLPRLEPLRELNYYYQALMVQGIAAQGLAAQGLVDQSLAALPLDNSGGSSNQLELSRH HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEHHC QSWGYFGKQTQAQNGLIEQQLAGKLDTAAQRTEMSNGIGNLPAAIVAMLEQVRQARNPVL CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH NWRRALRLFASSSRRTSVKNTLRRPSKRYGTTPGIKIQQHQRLLIAIDTSASVDDEQLQL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCEEECCCEEEEEEECCCCCCHHHHHH FFEEVHHIWRAGCEITIAECDTELKRQYQYRGIAPDKITGRGGTSFDEPILLANQQRFDG HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCC TIYFTDGEALAPTTLPRKPLLWLIHSESFLGDRDKQAFEHLKQSGRVIPMSISTSKVSKH EEEEECCCEECCCCCCCCCEEEEEECCHHCCCCHHHHHHHHHHCCCEEEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]