| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962658
Identifier: 157962658
GI number: 157962658
Start: 3463622
End: 3464182
Strand: Reverse
Name: 157962658
Synonym: Spea_2838
Alternate gene names: NA
Gene position: 3464182-3463622 (Counterclockwise)
Preceding gene: 157962659
Following gene: 157962655
Centisome position: 66.95
GC content: 42.42
Gene sequence:
>561_bases ATGCGTTGTTTAAATGAGCCTATTGCAAGGCAAGCTAATTATGAAGACAACTGCACAGGGCATTTTTGGGAAGGACGCTT TAAGTCACAAGCATTACTCGATGAAGCCGCAGTACTTGCCTGTATGGCTTATGTTGAGCTTAATCCCATCAGAGCCAAGG TGGCTAAGACACCTGAGAAATCAGACTATACCAGCTTGCAACTAAGAGTGAAGGCTGCTCTAAAATGCAAGCAACCTACT AAGTTATTGTCCTTTATTGGTAATGAGAGAAAACACCAACCAAAAGGCATCAACTTCTCGCTTGAAGATTATTTAATGCT TGTTGAAGAAACGAGTCGAATCATTCGGGATAACAAGCGAGGGGCAATTTCTGCTAATGCAGAAAAGATACTGAGTAGGC TCAATATTCCGAGTGCTAACTGGATAAAAATCACCTCTGAATTTGGAAAACTGTTTCATGGGCCAGTAGGTACTCTGCAG GAGTTAACTCACTATTGTGAACATTTAGAGAAGCGACGACGACACTTTGCGCACTGCTGCGAGTATCTTCAGGCAAGCTA A
Upstream 100 bases:
>100_bases GAAATTCGCTAAAGGTGATGTGATTGAGGAGTGCATGGTTGCATTGTTAAAGCATTCAATAGCAACATACCGCTCACGCC TTAGTGATATTAGCTGATTT
Downstream 100 bases:
>100_bases GCCATTCAAGCAACCCGTTCATTTAGTTTATAGAGTCACTCTATAAGCTGATTTTCTTCGCATAAATCCCACCCTTTTAT AGCTCAACCCTTTATTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLACMAYVELNPIRAKVAKTPEKSDYTSLQLRVKAALKCKQPT KLLSFIGNERKHQPKGINFSLEDYLMLVEETSRIIRDNKRGAISANAEKILSRLNIPSANWIKITSEFGKLFHGPVGTLQ ELTHYCEHLEKRRRHFAHCCEYLQAS
Sequences:
>Translated_186_residues MRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLACMAYVELNPIRAKVAKTPEKSDYTSLQLRVKAALKCKQPT KLLSFIGNERKHQPKGINFSLEDYLMLVEETSRIIRDNKRGAISANAEKILSRLNIPSANWIKITSEFGKLFHGPVGTLQ ELTHYCEHLEKRRRHFAHCCEYLQAS >Mature_186_residues MRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLACMAYVELNPIRAKVAKTPEKSDYTSLQLRVKAALKCKQPT KLLSFIGNERKHQPKGINFSLEDYLMLVEETSRIIRDNKRGAISANAEKILSRLNIPSANWIKITSEFGKLFHGPVGTLQ ELTHYCEHLEKRRRHFAHCCEYLQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21322; Mature: 21322
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLACMAYVELNPIRAKVAKTPEK CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC SDYTSLQLRVKAALKCKQPTKLLSFIGNERKHQPKGINFSLEDYLMLVEETSRIIRDNKR CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GAISANAEKILSRLNIPSANWIKITSEFGKLFHGPVGTLQELTHYCEHLEKRRRHFAHCC CCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EYLQAS HHHHCC >Mature Secondary Structure MRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLACMAYVELNPIRAKVAKTPEK CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC SDYTSLQLRVKAALKCKQPTKLLSFIGNERKHQPKGINFSLEDYLMLVEETSRIIRDNKR CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GAISANAEKILSRLNIPSANWIKITSEFGKLFHGPVGTLQELTHYCEHLEKRRRHFAHCC CCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EYLQAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA