| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962533
Identifier: 157962533
GI number: 157962533
Start: 3314328
End: 3315257
Strand: Reverse
Name: 157962533
Synonym: Spea_2712
Alternate gene names: NA
Gene position: 3315257-3314328 (Counterclockwise)
Preceding gene: 157962537
Following gene: 157962532
Centisome position: 64.07
GC content: 41.94
Gene sequence:
>930_bases ATGGAATTATTCACGCTACTATTAAAAATTCGCAATGAATATGGCTTGACCCAAGCAGAAATGGTGGAAAAATTATCATT ATTTCATAAGGTTTTTGCTAATCTTGACCTGATCACTTATAGCCGCTGGGAGCGAGGCGTCTCAATGCCATCAACATTGC GAATTATCCAGCTGCTCACCTTCGCTGAATATGATGTATTAAGTCATTTAATTGAGCTGGATCTCAAGTTATCGAAAACC AAAGTTAATCAGCTTAGGCGCATCGAAGCACTGGCTTTTGATCAACAAGACTTGATTCAAACCTCCTATTATCCTGTCAC GGATACATGCTTTTATAAATACACAGCATCTACGCCGCTAACGGATCTGCGTAAATTGGCGTTGATCTGTGAGAGTAGCG CCAAGTTTTTTAATTTAACCGAGCGTGATGTTCAAGAAAGGTGCGAGCGGGCCATAAAGTTACAACAGCAGGGCGCCTTG CATATGCTAACCTGCGAAGGAAGCCCCGATAACCTCTATGCCCATGCCATGCTCTCTGTACATAAAGCCGATGACAGAGA GTCGCTAATTAATGAGTTTGTCGATTTCTATAATACCCCTAGAGAGCCTGACATTAGTGGCGACAAAATCATCTTCTTTC ACTCAATCATGAAGTTTAATTATCGCTGGTGGGAGTTTGGGGTTTTTCATCTACTCAAGATCTTGTTAGAGAACCCAGAT ATTCAAGAGATCTTCATGATCGTTCGAGACAAGAATGCTGAGCAGCCTTATGTTAGCTTCGGTTTTGAGGTCTTAGCCGA ATATGAGGAAAAAAATCCCCTAGCAGGGATGCGTAAGCTTATCGGTATTAGTCGAGACGATTATCTGTCCCATCATGGCG TGATCTCTTGGTTAAAAGAACATGCACACTTTATGAATGCTCAAGCTTGA
Upstream 100 bases:
>100_bases TGTTTGCTTTTTTGCAGTTAAGGATTTTCATTTAATGGCACATTTTTGCTACTATGCCAGTTAATGATTTTGGTTAGTTT ATATTGGTTTACACGTACTT
Downstream 100 bases:
>100_bases TTCGAACACTGATAATCCATTGGAACCGCACTCTGTTGTTGAGCTTTTATAGGCATAGTTAAATTTTGTTTTTCTAAAGT GCCCTGTAGAAGCTCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MELFTLLLKIRNEYGLTQAEMVEKLSLFHKVFANLDLITYSRWERGVSMPSTLRIIQLLTFAEYDVLSHLIELDLKLSKT KVNQLRRIEALAFDQQDLIQTSYYPVTDTCFYKYTASTPLTDLRKLALICESSAKFFNLTERDVQERCERAIKLQQQGAL HMLTCEGSPDNLYAHAMLSVHKADDRESLINEFVDFYNTPREPDISGDKIIFFHSIMKFNYRWWEFGVFHLLKILLENPD IQEIFMIVRDKNAEQPYVSFGFEVLAEYEEKNPLAGMRKLIGISRDDYLSHHGVISWLKEHAHFMNAQA
Sequences:
>Translated_309_residues MELFTLLLKIRNEYGLTQAEMVEKLSLFHKVFANLDLITYSRWERGVSMPSTLRIIQLLTFAEYDVLSHLIELDLKLSKT KVNQLRRIEALAFDQQDLIQTSYYPVTDTCFYKYTASTPLTDLRKLALICESSAKFFNLTERDVQERCERAIKLQQQGAL HMLTCEGSPDNLYAHAMLSVHKADDRESLINEFVDFYNTPREPDISGDKIIFFHSIMKFNYRWWEFGVFHLLKILLENPD IQEIFMIVRDKNAEQPYVSFGFEVLAEYEEKNPLAGMRKLIGISRDDYLSHHGVISWLKEHAHFMNAQA >Mature_309_residues MELFTLLLKIRNEYGLTQAEMVEKLSLFHKVFANLDLITYSRWERGVSMPSTLRIIQLLTFAEYDVLSHLIELDLKLSKT KVNQLRRIEALAFDQQDLIQTSYYPVTDTCFYKYTASTPLTDLRKLALICESSAKFFNLTERDVQERCERAIKLQQQGAL HMLTCEGSPDNLYAHAMLSVHKADDRESLINEFVDFYNTPREPDISGDKIIFFHSIMKFNYRWWEFGVFHLLKILLENPD IQEIFMIVRDKNAEQPYVSFGFEVLAEYEEKNPLAGMRKLIGISRDDYLSHHGVISWLKEHAHFMNAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36180; Mature: 36180
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFTLLLKIRNEYGLTQAEMVEKLSLFHKVFANLDLITYSRWERGVSMPSTLRIIQLLT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHH FAEYDVLSHLIELDLKLSKTKVNQLRRIEALAFDQQDLIQTSYYPVTDTCFYKYTASTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCH TDLRKLALICESSAKFFNLTERDVQERCERAIKLQQQGALHMLTCEGSPDNLYAHAMLSV HHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH HKADDRESLINEFVDFYNTPREPDISGDKIIFFHSIMKFNYRWWEFGVFHLLKILLENPD HCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHEEHHHHHCCHHHHHHHHHHHHHHHCCCC IQEIFMIVRDKNAEQPYVSFGFEVLAEYEEKNPLAGMRKLIGISRDDYLSHHGVISWLKE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH HAHFMNAQA HHHHHCCCC >Mature Secondary Structure MELFTLLLKIRNEYGLTQAEMVEKLSLFHKVFANLDLITYSRWERGVSMPSTLRIIQLLT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHH FAEYDVLSHLIELDLKLSKTKVNQLRRIEALAFDQQDLIQTSYYPVTDTCFYKYTASTPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCH TDLRKLALICESSAKFFNLTERDVQERCERAIKLQQQGALHMLTCEGSPDNLYAHAMLSV HHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH HKADDRESLINEFVDFYNTPREPDISGDKIIFFHSIMKFNYRWWEFGVFHLLKILLENPD HCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHEEHHHHHCCHHHHHHHHHHHHHHHCCCC IQEIFMIVRDKNAEQPYVSFGFEVLAEYEEKNPLAGMRKLIGISRDDYLSHHGVISWLKE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH HAHFMNAQA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA