Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962537

Identifier: 157962537

GI number: 157962537

Start: 3320424

End: 3321974

Strand: Reverse

Name: 157962537

Synonym: Spea_2716

Alternate gene names: NA

Gene position: 3321974-3320424 (Counterclockwise)

Preceding gene: 157962538

Following gene: 157962533

Centisome position: 64.2

GC content: 44.36

Gene sequence:

>1551_bases
ATGATGAACAACTTAAACGCTTTATATAAAAAAGTGTTACTCGCAAGTATGATAAGCGTATTGCTGGGCTGTGGATCTGA
CAATGATGATGTCGTGACACCACCTACAAGCGATAATAATCCGCCAGTTGCTCAACCAACACTAGCTACCGCAATCGTGG
GCACACCAGTAATGATTGATGCCATTGCTAACGATATGGATCCTGATGGTGATGCGCTAACGCTAAGTCTAGTGGAGTTA
ACTGAAGGTACAGGTAAAGGGGTTATTCAAGACAACCAGCTGCTGTTTACACCAGAGAAACCAGGGACAGTGGTATTTAA
CTATACTGTTGCCGACCCTGAAGGGGCAACAGATAGCGCAACAGTGACAATTACAGTCTCTGCAGTCACTGAGACAGGGC
ACTTTGTGGGAACACAAACTTGCTTAAGCTGTCATACAGACAAAGCGACCTTCTTAGAAACAGGCCATAACTTTAAGCTG
AGCAAGATTGAGAACGGCAAGGCGCCAGAGTTCCCATTTACCTCATTAAAAGGTTCTGTAGAGTTGCTTCATGGTGCGAA
AAATAGTGCGGGTACACCGAATAGTTGGGATGAAGTGAGCTATGTTATCGGTGGTTACTATCGTACGGCTATGTTTATTG
ACAATAACGGTTACATTCTTGCTGGCGACGGTGTTCGGGTAGAATTACCTGAAAATGGTGAAGATTTTACGATAAATAAT
ATCGTTCCTAATAATGCACATTTTCCAGTAGACGGACACTCATTCGATTGCGGTCACTGCCATACGACCGGTTGGAAAGA
TCACACACCAAATTCACCTTTAAACCCGAATCATCAAGACGGTTTAGTCGGTATCGAAGGTACGTTTGAATATACAGGTA
TTCAGTGTGAAGCATGCCATGGCGCGGGTAACAAGCATATTGTGACTCAGTCTGCAGATGATATTGACCGCATTGCTAAG
GGGCGTTACACCTCAGACTTACAGCAAGCTGATATGGCGTTCGGTAAGGCTATTACCTGTTCTGAATGTCACAGTAAGAA
AACTAATCGCAAGTTCCCAACCTTTATCAGTGAGCATAACAAGGACTTTGGTGGCGATAGCATAGGTGGTCGTACGATCC
CTTATGATCTCGGTGGTCGAGTGGCGGCTGATGCGCTATTAGGAATGGATGCCGATACGGGCGTAGTGACGGGTAAGAAA
CATGATATGGCGTGTCATACTTGTCATAACCCACATCAGTCTAAGATCAATGATGACCAGCCGGGCCATGAAAATGCCAT
GGTGAAGCAATGTGTTGATTGTCACTATGATAAGCCGTTCACACCTGAGCTTGAGGTGCATAGTTTTATGGCTAAGTGCG
AAAGCTGCCATATGCCTAACAACAAGCACTTCTTTAGGATTAATTTGGAACACCCAGCGTCTAGCCCTGAAAACTTCTCA
AAAGATGGCAAGTATGTTCAGCCTTGGAATACTTCAAAAGACAGTTGTTCTGGTTGTCATAAAGTAGATTATGACGAACG
TGCAGCGCTAATTAAGAAGATGCACCAGTAA

Upstream 100 bases:

>100_bases
TAAGAGGGTGAAACTCTTCTTTCGAGAAGGTGTGATAGTTTTTTTCGGAAAAACATAAAAATTTAAATAAAAGTGCAATG
ATAGTTTTGCAGGGAATATC

Downstream 100 bases:

>100_bases
TATTTTGTTATCGGATTAAAGCCCCTTTTGGGGCTTTTTTCGTTTTAGAAAGCGTCAGTGACTCAATCTTAGGTTAATGA
GTCGGAAATGACTTTACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL
TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL
SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN
IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK
GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK
HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS
KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ

Sequences:

>Translated_516_residues
MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL
TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL
SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN
IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK
GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK
HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS
KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ
>Mature_516_residues
MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL
TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL
SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN
IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK
GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK
HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS
KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55920; Mature: 55920

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMID
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEE
AIANDMDPDGDALTLSLVELTEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSA
HHHCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCE
TVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKLSKIENGKAPEFPFTSLKGSV
EEEEEEEEEECCCCEEECHHHHEECCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCE
ELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN
EEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEC
IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCEEEEEEC
GAGNKHIVTQSADDIDRIAKGRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHN
CCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCHHHHHCC
KDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKKHDMACHTCHNPHQSKINDDQ
CCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCC
PGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ
CCCCEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMID
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEE
AIANDMDPDGDALTLSLVELTEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSA
HHHCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCE
TVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKLSKIENGKAPEFPFTSLKGSV
EEEEEEEEEECCCCEEECHHHHEECCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCE
ELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN
EEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEC
IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCEEEEEEC
GAGNKHIVTQSADDIDRIAKGRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHN
CCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCHHHHHCC
KDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKKHDMACHTCHNPHQSKINDDQ
CCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCC
PGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ
CCCCEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA