| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962537
Identifier: 157962537
GI number: 157962537
Start: 3320424
End: 3321974
Strand: Reverse
Name: 157962537
Synonym: Spea_2716
Alternate gene names: NA
Gene position: 3321974-3320424 (Counterclockwise)
Preceding gene: 157962538
Following gene: 157962533
Centisome position: 64.2
GC content: 44.36
Gene sequence:
>1551_bases ATGATGAACAACTTAAACGCTTTATATAAAAAAGTGTTACTCGCAAGTATGATAAGCGTATTGCTGGGCTGTGGATCTGA CAATGATGATGTCGTGACACCACCTACAAGCGATAATAATCCGCCAGTTGCTCAACCAACACTAGCTACCGCAATCGTGG GCACACCAGTAATGATTGATGCCATTGCTAACGATATGGATCCTGATGGTGATGCGCTAACGCTAAGTCTAGTGGAGTTA ACTGAAGGTACAGGTAAAGGGGTTATTCAAGACAACCAGCTGCTGTTTACACCAGAGAAACCAGGGACAGTGGTATTTAA CTATACTGTTGCCGACCCTGAAGGGGCAACAGATAGCGCAACAGTGACAATTACAGTCTCTGCAGTCACTGAGACAGGGC ACTTTGTGGGAACACAAACTTGCTTAAGCTGTCATACAGACAAAGCGACCTTCTTAGAAACAGGCCATAACTTTAAGCTG AGCAAGATTGAGAACGGCAAGGCGCCAGAGTTCCCATTTACCTCATTAAAAGGTTCTGTAGAGTTGCTTCATGGTGCGAA AAATAGTGCGGGTACACCGAATAGTTGGGATGAAGTGAGCTATGTTATCGGTGGTTACTATCGTACGGCTATGTTTATTG ACAATAACGGTTACATTCTTGCTGGCGACGGTGTTCGGGTAGAATTACCTGAAAATGGTGAAGATTTTACGATAAATAAT ATCGTTCCTAATAATGCACATTTTCCAGTAGACGGACACTCATTCGATTGCGGTCACTGCCATACGACCGGTTGGAAAGA TCACACACCAAATTCACCTTTAAACCCGAATCATCAAGACGGTTTAGTCGGTATCGAAGGTACGTTTGAATATACAGGTA TTCAGTGTGAAGCATGCCATGGCGCGGGTAACAAGCATATTGTGACTCAGTCTGCAGATGATATTGACCGCATTGCTAAG GGGCGTTACACCTCAGACTTACAGCAAGCTGATATGGCGTTCGGTAAGGCTATTACCTGTTCTGAATGTCACAGTAAGAA AACTAATCGCAAGTTCCCAACCTTTATCAGTGAGCATAACAAGGACTTTGGTGGCGATAGCATAGGTGGTCGTACGATCC CTTATGATCTCGGTGGTCGAGTGGCGGCTGATGCGCTATTAGGAATGGATGCCGATACGGGCGTAGTGACGGGTAAGAAA CATGATATGGCGTGTCATACTTGTCATAACCCACATCAGTCTAAGATCAATGATGACCAGCCGGGCCATGAAAATGCCAT GGTGAAGCAATGTGTTGATTGTCACTATGATAAGCCGTTCACACCTGAGCTTGAGGTGCATAGTTTTATGGCTAAGTGCG AAAGCTGCCATATGCCTAACAACAAGCACTTCTTTAGGATTAATTTGGAACACCCAGCGTCTAGCCCTGAAAACTTCTCA AAAGATGGCAAGTATGTTCAGCCTTGGAATACTTCAAAAGACAGTTGTTCTGGTTGTCATAAAGTAGATTATGACGAACG TGCAGCGCTAATTAAGAAGATGCACCAGTAA
Upstream 100 bases:
>100_bases TAAGAGGGTGAAACTCTTCTTTCGAGAAGGTGTGATAGTTTTTTTCGGAAAAACATAAAAATTTAAATAAAAGTGCAATG ATAGTTTTGCAGGGAATATC
Downstream 100 bases:
>100_bases TATTTTGTTATCGGATTAAAGCCCCTTTTGGGGCTTTTTTCGTTTTAGAAAGCGTCAGTGACTCAATCTTAGGTTAATGA GTCGGAAATGACTTTACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ
Sequences:
>Translated_516_residues MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ >Mature_516_residues MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMIDAIANDMDPDGDALTLSLVEL TEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSATVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKL SKIENGKAPEFPFTSLKGSVELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACHGAGNKHIVTQSADDIDRIAK GRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHNKDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKK HDMACHTCHNPHQSKINDDQPGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55920; Mature: 55920
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS51008 MULTIHEME_CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMID CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEE AIANDMDPDGDALTLSLVELTEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSA HHHCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCE TVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKLSKIENGKAPEFPFTSLKGSV EEEEEEEEEECCCCEEECHHHHEECCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCE ELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN EEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEC IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCEEEEEEC GAGNKHIVTQSADDIDRIAKGRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHN CCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCHHHHHCC KDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKKHDMACHTCHNPHQSKINDDQ CCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCC PGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ CCCCEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMNNLNALYKKVLLASMISVLLGCGSDNDDVVTPPTSDNNPPVAQPTLATAIVGTPVMID CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEE AIANDMDPDGDALTLSLVELTEGTGKGVIQDNQLLFTPEKPGTVVFNYTVADPEGATDSA HHHCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCE TVTITVSAVTETGHFVGTQTCLSCHTDKATFLETGHNFKLSKIENGKAPEFPFTSLKGSV EEEEEEEEEECCCCEEECHHHHEECCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCE ELLHGAKNSAGTPNSWDEVSYVIGGYYRTAMFIDNNGYILAGDGVRVELPENGEDFTINN EEEECCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEC IVPNNAHFPVDGHSFDCGHCHTTGWKDHTPNSPLNPNHQDGLVGIEGTFEYTGIQCEACH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCEEEEEEC GAGNKHIVTQSADDIDRIAKGRYTSDLQQADMAFGKAITCSECHSKKTNRKFPTFISEHN CCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCHHHHHCC KDFGGDSIGGRTIPYDLGGRVAADALLGMDADTGVVTGKKHDMACHTCHNPHQSKINDDQ CCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCC PGHENAMVKQCVDCHYDKPFTPELEVHSFMAKCESCHMPNNKHFFRINLEHPASSPENFS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC KDGKYVQPWNTSKDSCSGCHKVDYDERAALIKKMHQ CCCCEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA