| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962532
Identifier: 157962532
GI number: 157962532
Start: 3311107
End: 3314004
Strand: Reverse
Name: 157962532
Synonym: Spea_2711
Alternate gene names: NA
Gene position: 3314004-3311107 (Counterclockwise)
Preceding gene: 157962533
Following gene: 157962531
Centisome position: 64.04
GC content: 43.58
Gene sequence:
>2898_bases ATGCGATTACTTTCTAAACTAGCCATATTGTTATCCCTAGTAGTATTAAGTGCCTGCGGTGGAAGTTCTGATGGTGAAGA TGGTGGCATAACACCACCGCCTCCCCCCGTGGTTAAATCGACAATCAGTGCGATGGACTTTCGCCAAGCTGTAATCATTG CCGATGGCGTGAGTCAGTCTGTGACGCTAAATTTGTCAAACTACATTGCTACAAGTTTGAGCACTGAGTTGACGCTGCTG AAGGTTGAAGCGCTTGGCGATGTCGCTGATTGTGAACCTGCTAAGCTAGACAAGTCCGGCTTATCTTTCTCTGTCAGGCC AAATCGCTCATTGAGCTGTGATTACCGCTATACGGTGTCTGATGGCACCGACCAAGCTTCGGCATTAGCCTCTATTTTGT TTACCAGCCAAAGCGCAGAACAAATTGCAGCAGAACTAGAGTTAGATCTGCCAGCAGGCGGCGTACTGCCTGATCTCAAT AAACCTCTTACGCTGGGGGATACGCTTAGTTTTAATATTCAAGACGAACTCGCCACAGAGTTTTTACCCATGACAAACCC AAGCTTTGAAGCATCAACGGTGGTGGTGGGTAGTGGCATAGCAGACGTCTCCCAAGCGGGGGACTTTAGCTACCAAGGTA TCGAGATAGGTCTTACTTCGGTGACCTATTCTGTGATTGATGACAATAAACTGGTGTTTACTGGCGTCATCAATATCGAT GTATCCGGCAACAGTAATACGGCGCCAGAAACAAAAGATGAAACCTATGGCCGATTAGCGCCTGTTGAGGATTCTCTGAC TCTGGATATTTTAAACTTTCCAGGTGTTGGCTCACTCGTTAACGACAGGGAAGGCGATAAGGTGCAACTTGTTGGCGTGC AGGTCTATAACGCCAATGTCAGTCTGGTTAATCCGGGCGATGTCAATAATACCAAGTTTACCTTTTCAGCGAGTGAAAAG GGCTTGTATGAAGTTAAGTACACGGTTTACGACCATGAGGTCGATGGGGTGAGCAGTGGCGTTATCAGTATAGAAACTGG CTTTGTACGTGAGGGGATTTTGGAGTTTTCCTTTAATGGCTTCATTAAACTATTTGGTGATGGTGCCCTAGGGGCTGTTG GACGTAATACCCTGATAAAACCTTTTAAAGAGACACTGCTGCCTTACATGGAAAATAATGGCCTGTATGCCACAGCGCTT AAAAATATCGGCTTCGGTAATTACCGTATCGATATGAGCAGTGAAAGCGGTGGCGAAGACAAGATAGTGCTATTTACAGC GTTAAATGCACTACAACCCGTCGAAACACTCATAGAGTTGCCAGCCACAAGCAAAGTTTATTATGGGTTAACCTATGCCG ATAGGATCATGGGCTACGGTGGTATAGCCTATGAGGTCATGCAATCTGGTCACGCCATCGCACACAACCAAATATACGGT ACCAGTAATACTTGTTATGGCGATTTTGCAGATAAATTTAATGCATTAAATCTAAATGACGTTGAGAAAATTGAGAGTTT TGGCACTTTATCTGCGGTGGTTTATTTCAGCGATGGAACAGCGAAATATTACAGCCTTGATTGCGGTAGCACTGGTAAGT TTATCAGTTCAAATTGGACTAAACATATAGGCAAAGTATCCCAATGTTGGGACGCGCCCGATAATGGCAAGCAACATGGC TCGTTCTATTGCTTGAACAAAGATCAAACTCAACAGGCATTCGTGCGCGTGGTTGGCTCGCATGAAGTTGATGAGAAGGG CAATATTTATCTTAAGTTCGCTAACTTCTTTAAAAATACAGGTAAGAAGATAGTAAAAAGTACCCAAGTGACTAAAGGCA TCGCCGCTTTAACTTCAACTGGTGAGCTGTATGTGTTATTCGATGGCAAGAATAAAGATGGAGAGTCTTACAAAGTTAAA AAAGTCGCGACCAAAGTTAACGATTACCAGCAAGCGGCGAACTATGTCACTTATATGCACATGGTTGAAGATGATTACCG CGCAACAGCAATGGGTGAAAATGATGCAGGCAGTAGCGAGTCGCGTGATAGTTATTATTTAGAGTTTAACGGTTATGCAC AGTATCACCAAGAGACACTACCTAATGGCAAAAAGCTGGATATGACCATTAAATTTAGTAAGTTAAGTCATAGTGACCGT AAAAAAGTGAGGTTTTATGAGAACACGGCTAACGCGGTTGCCTTAATCATAGGTGACAGATTAAAAATACTGACTAATAA AGGGCTTAAAGAGTACGGTGGTAAAGATCATCATTATAATATTGTCGGCGATTCAGCCAACTCTTACGGTGTCCGTACAG AAACTGCGGGGCAAGGACTGAGTACCTTCTTTGCTCGGGGTAATAAGAATGATCATGAAGAACATTGGGAGTTTTACAGC CCACTCGAAGAGCTAGACCCAAGCTTAACCTGTGAAAAACCTAAGCACCGAGAAGTCTCTTATCCCTATATTTTAACGGG CTGTACCTATATCGATTTCAGAATGAATGGTGCGGTGATCCCCCTAACCGACTCGGGAGTCAGTGTTTATCCTGAGGTGC GCTTTGCTAATGAAGATGCCACGGGCAAGGTTTATCCAGACTTGGTGGATTTAGATAATGATGGTCTGTCTACGGCAAGT GAAATCGAAGCGTGTTTGGCTGAGCGCACAGAGTATCATCGTGGTGATATTGAATACTGCTCACAACCCATTTTATCTGA CAGTGATGGCGACGACGTGTTAGATAGTTTTGAGTATCGCTATCAAGATACCGGCAAAGGGAACTATCAAAGCCGCTTTA GCCATATTGTTGGCGATTATAAAAATAATGGCTTTGGTCCTTATGATGGTAATAAAGACATTAATAGTAATAACCAGTTA GATAAATACGATAATTAG
Upstream 100 bases:
>100_bases CATTGCCTTGCTATGACTCGGCATAGCAATCATTCGGCATAGCAATCACATCAAGAGTCTGAGGTGCAGCGTGTTACACG AACAGATATTAAGGTTTGCG
Downstream 100 bases:
>100_bases CTGCTTATGTTTTGCGGTTAGATTCACTATCTCAATGAAATGGCAGCGTTTGGCTTATACCAATGAGTATAGGTTGAACG CTGCCTTTTTATTTTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 965; Mature: 965
Protein sequence:
>965_residues MRLLSKLAILLSLVVLSACGGSSDGEDGGITPPPPPVVKSTISAMDFRQAVIIADGVSQSVTLNLSNYIATSLSTELTLL KVEALGDVADCEPAKLDKSGLSFSVRPNRSLSCDYRYTVSDGTDQASALASILFTSQSAEQIAAELELDLPAGGVLPDLN KPLTLGDTLSFNIQDELATEFLPMTNPSFEASTVVVGSGIADVSQAGDFSYQGIEIGLTSVTYSVIDDNKLVFTGVINID VSGNSNTAPETKDETYGRLAPVEDSLTLDILNFPGVGSLVNDREGDKVQLVGVQVYNANVSLVNPGDVNNTKFTFSASEK GLYEVKYTVYDHEVDGVSSGVISIETGFVREGILEFSFNGFIKLFGDGALGAVGRNTLIKPFKETLLPYMENNGLYATAL KNIGFGNYRIDMSSESGGEDKIVLFTALNALQPVETLIELPATSKVYYGLTYADRIMGYGGIAYEVMQSGHAIAHNQIYG TSNTCYGDFADKFNALNLNDVEKIESFGTLSAVVYFSDGTAKYYSLDCGSTGKFISSNWTKHIGKVSQCWDAPDNGKQHG SFYCLNKDQTQQAFVRVVGSHEVDEKGNIYLKFANFFKNTGKKIVKSTQVTKGIAALTSTGELYVLFDGKNKDGESYKVK KVATKVNDYQQAANYVTYMHMVEDDYRATAMGENDAGSSESRDSYYLEFNGYAQYHQETLPNGKKLDMTIKFSKLSHSDR KKVRFYENTANAVALIIGDRLKILTNKGLKEYGGKDHHYNIVGDSANSYGVRTETAGQGLSTFFARGNKNDHEEHWEFYS PLEELDPSLTCEKPKHREVSYPYILTGCTYIDFRMNGAVIPLTDSGVSVYPEVRFANEDATGKVYPDLVDLDNDGLSTAS EIEACLAERTEYHRGDIEYCSQPILSDSDGDDVLDSFEYRYQDTGKGNYQSRFSHIVGDYKNNGFGPYDGNKDINSNNQL DKYDN
Sequences:
>Translated_965_residues MRLLSKLAILLSLVVLSACGGSSDGEDGGITPPPPPVVKSTISAMDFRQAVIIADGVSQSVTLNLSNYIATSLSTELTLL KVEALGDVADCEPAKLDKSGLSFSVRPNRSLSCDYRYTVSDGTDQASALASILFTSQSAEQIAAELELDLPAGGVLPDLN KPLTLGDTLSFNIQDELATEFLPMTNPSFEASTVVVGSGIADVSQAGDFSYQGIEIGLTSVTYSVIDDNKLVFTGVINID VSGNSNTAPETKDETYGRLAPVEDSLTLDILNFPGVGSLVNDREGDKVQLVGVQVYNANVSLVNPGDVNNTKFTFSASEK GLYEVKYTVYDHEVDGVSSGVISIETGFVREGILEFSFNGFIKLFGDGALGAVGRNTLIKPFKETLLPYMENNGLYATAL KNIGFGNYRIDMSSESGGEDKIVLFTALNALQPVETLIELPATSKVYYGLTYADRIMGYGGIAYEVMQSGHAIAHNQIYG TSNTCYGDFADKFNALNLNDVEKIESFGTLSAVVYFSDGTAKYYSLDCGSTGKFISSNWTKHIGKVSQCWDAPDNGKQHG SFYCLNKDQTQQAFVRVVGSHEVDEKGNIYLKFANFFKNTGKKIVKSTQVTKGIAALTSTGELYVLFDGKNKDGESYKVK KVATKVNDYQQAANYVTYMHMVEDDYRATAMGENDAGSSESRDSYYLEFNGYAQYHQETLPNGKKLDMTIKFSKLSHSDR KKVRFYENTANAVALIIGDRLKILTNKGLKEYGGKDHHYNIVGDSANSYGVRTETAGQGLSTFFARGNKNDHEEHWEFYS PLEELDPSLTCEKPKHREVSYPYILTGCTYIDFRMNGAVIPLTDSGVSVYPEVRFANEDATGKVYPDLVDLDNDGLSTAS EIEACLAERTEYHRGDIEYCSQPILSDSDGDDVLDSFEYRYQDTGKGNYQSRFSHIVGDYKNNGFGPYDGNKDINSNNQL DKYDN >Mature_965_residues MRLLSKLAILLSLVVLSACGGSSDGEDGGITPPPPPVVKSTISAMDFRQAVIIADGVSQSVTLNLSNYIATSLSTELTLL KVEALGDVADCEPAKLDKSGLSFSVRPNRSLSCDYRYTVSDGTDQASALASILFTSQSAEQIAAELELDLPAGGVLPDLN KPLTLGDTLSFNIQDELATEFLPMTNPSFEASTVVVGSGIADVSQAGDFSYQGIEIGLTSVTYSVIDDNKLVFTGVINID VSGNSNTAPETKDETYGRLAPVEDSLTLDILNFPGVGSLVNDREGDKVQLVGVQVYNANVSLVNPGDVNNTKFTFSASEK GLYEVKYTVYDHEVDGVSSGVISIETGFVREGILEFSFNGFIKLFGDGALGAVGRNTLIKPFKETLLPYMENNGLYATAL KNIGFGNYRIDMSSESGGEDKIVLFTALNALQPVETLIELPATSKVYYGLTYADRIMGYGGIAYEVMQSGHAIAHNQIYG TSNTCYGDFADKFNALNLNDVEKIESFGTLSAVVYFSDGTAKYYSLDCGSTGKFISSNWTKHIGKVSQCWDAPDNGKQHG SFYCLNKDQTQQAFVRVVGSHEVDEKGNIYLKFANFFKNTGKKIVKSTQVTKGIAALTSTGELYVLFDGKNKDGESYKVK KVATKVNDYQQAANYVTYMHMVEDDYRATAMGENDAGSSESRDSYYLEFNGYAQYHQETLPNGKKLDMTIKFSKLSHSDR KKVRFYENTANAVALIIGDRLKILTNKGLKEYGGKDHHYNIVGDSANSYGVRTETAGQGLSTFFARGNKNDHEEHWEFYS PLEELDPSLTCEKPKHREVSYPYILTGCTYIDFRMNGAVIPLTDSGVSVYPEVRFANEDATGKVYPDLVDLDNDGLSTAS EIEACLAERTEYHRGDIEYCSQPILSDSDGDDVLDSFEYRYQDTGKGNYQSRFSHIVGDYKNNGFGPYDGNKDINSNNQL DKYDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105508; Mature: 105508
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLSKLAILLSLVVLSACGGSSDGEDGGITPPPPPVVKSTISAMDFRQAVIIADGVSQS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCE VTLNLSNYIATSLSTELTLLKVEALGDVADCEPAKLDKSGLSFSVRPNRSLSCDYRYTVS EEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEC DGTDQASALASILFTSQSAEQIAAELELDLPAGGVLPDLNKPLTLGDTLSFNIQDELATE CCCCHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCCCCCCCCEEECCEEEEEEHHHHHHH FLPMTNPSFEASTVVVGSGIADVSQAGDFSYQGIEIGLTSVTYSVIDDNKLVFTGVINID HCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEE VSGNSNTAPETKDETYGRLAPVEDSLTLDILNFPGVGSLVNDREGDKVQLVGVQVYNANV ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECEE SLVNPGDVNNTKFTFSASEKGLYEVKYTVYDHEVDGVSSGVISIETGFVREGILEFSFNG EEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCHHHHHHHEECCCC FIKLFGDGALGAVGRNTLIKPFKETLLPYMENNGLYATALKNIGFGNYRIDMSSESGGED EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCEEEEEECCCCCCCC KIVLFTALNALQPVETLIELPATSKVYYGLTYADRIMGYGGIAYEVMQSGHAIAHNQIYG EEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCEEEECEEEC TSNTCYGDFADKFNALNLNDVEKIESFGTLSAVVYFSDGTAKYYSLDCGSTGKFISSNWT CCCCCCCCHHHCCCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCHHHCCHH KHIGKVSQCWDAPDNGKQHGSFYCLNKDQTQQAFVRVVGSHEVDEKGNIYLKFANFFKNT HHHCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHH GKKIVKSTQVTKGIAALTSTGELYVLFDGKNKDGESYKVKKVATKVNDYQQAANYVTYMH HHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEE MVEDDYRATAMGENDAGSSESRDSYYLEFNGYAQYHQETLPNGKKLDMTIKFSKLSHSDR EECCCCEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCC KKVRFYENTANAVALIIGDRLKILTNKGLKEYGGKDHHYNIVGDSANSYGVRTETAGQGL CEEEEEECCCCEEEEEECCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCEECCCCCCH STFFARGNKNDHEEHWEFYSPLEELDPSLTCEKPKHREVSYPYILTGCTYIDFRMNGAVI HHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCEEE PLTDSGVSVYPEVRFANEDATGKVYPDLVDLDNDGLSTASEIEACLAERTEYHRGDIEYC EEECCCCEECEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHH SQPILSDSDGDDVLDSFEYRYQDTGKGNYQSRFSHIVGDYKNNGFGPYDGNKDINSNNQL CCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DKYDN CCCCC >Mature Secondary Structure MRLLSKLAILLSLVVLSACGGSSDGEDGGITPPPPPVVKSTISAMDFRQAVIIADGVSQS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCE VTLNLSNYIATSLSTELTLLKVEALGDVADCEPAKLDKSGLSFSVRPNRSLSCDYRYTVS EEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEC DGTDQASALASILFTSQSAEQIAAELELDLPAGGVLPDLNKPLTLGDTLSFNIQDELATE CCCCHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCCCCCCCCEEECCEEEEEEHHHHHHH FLPMTNPSFEASTVVVGSGIADVSQAGDFSYQGIEIGLTSVTYSVIDDNKLVFTGVINID HCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEE VSGNSNTAPETKDETYGRLAPVEDSLTLDILNFPGVGSLVNDREGDKVQLVGVQVYNANV ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECEE SLVNPGDVNNTKFTFSASEKGLYEVKYTVYDHEVDGVSSGVISIETGFVREGILEFSFNG EEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCHHHHHHHEECCCC FIKLFGDGALGAVGRNTLIKPFKETLLPYMENNGLYATALKNIGFGNYRIDMSSESGGED EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCEEEEEECCCCCCCC KIVLFTALNALQPVETLIELPATSKVYYGLTYADRIMGYGGIAYEVMQSGHAIAHNQIYG EEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCEEEECEEEC TSNTCYGDFADKFNALNLNDVEKIESFGTLSAVVYFSDGTAKYYSLDCGSTGKFISSNWT CCCCCCCCHHHCCCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCHHHCCHH KHIGKVSQCWDAPDNGKQHGSFYCLNKDQTQQAFVRVVGSHEVDEKGNIYLKFANFFKNT HHHCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHH GKKIVKSTQVTKGIAALTSTGELYVLFDGKNKDGESYKVKKVATKVNDYQQAANYVTYMH HHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEE MVEDDYRATAMGENDAGSSESRDSYYLEFNGYAQYHQETLPNGKKLDMTIKFSKLSHSDR EECCCCEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCC KKVRFYENTANAVALIIGDRLKILTNKGLKEYGGKDHHYNIVGDSANSYGVRTETAGQGL CEEEEEECCCCEEEEEECCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCEECCCCCCH STFFARGNKNDHEEHWEFYSPLEELDPSLTCEKPKHREVSYPYILTGCTYIDFRMNGAVI HHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCEEE PLTDSGVSVYPEVRFANEDATGKVYPDLVDLDNDGLSTASEIEACLAERTEYHRGDIEYC EEECCCCEECEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHH SQPILSDSDGDDVLDSFEYRYQDTGKGNYQSRFSHIVGDYKNNGFGPYDGNKDINSNNQL CCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DKYDN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA