| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yuxL [H]
Identifier: 157961860
GI number: 157961860
Start: 2467255
End: 2469306
Strand: Direct
Name: yuxL [H]
Synonym: Spea_2039
Alternate gene names: 157961860
Gene position: 2467255-2469306 (Clockwise)
Preceding gene: 157961859
Following gene: 157961863
Centisome position: 47.68
GC content: 45.61
Gene sequence:
>2052_bases ATGAAAAAAACTGCAATCATAATAGCGCTTGCATCTGCAGGGGCCGTATTTAGCGCTCAGGCCACGTCAACATCACCTTT CACTGTGCAAGACCTCGTTAAAATGAATAAGCTTCATTCGGCAGCATTGTCAAATGATGGCACAAAAATTGTTTATGCGG TGAAAAATATTGATGCAGAAGGTGAGGCGAGTACTGATCTTTACATTCAAGACCTGACTTCAAGCTCTTCAAAAGCAAAA CAGATCACCAGTGCCGCTGGTACTGAGCATAGCGTCGCTTTTGCTCCTAATGACAAGAGTATCTATTTCCTTGCTGCGCG TAATGGCTCAAGCCAAGTGTACGAGCTTGCACTCGACGGCGGTGAAGCGATTCAGGTAACCGATTTTCCGTTAAATGTAG AAGGCTATAAGCTATCGCAAGATGGCAAGCAAGTCGTAGTCAACATGCGTGTCTTCCCAGACTGTAAAGATCTAGCTTGC TCAAAAGATAAATTCACAGCTGAAGCCGAGCGTGATACTACGGGTCGCGAATATAAGCAGCTAATGGTGCGTCACTGGGA CACTTGGAGTGACCACTCAAGAAGCCATCTGTTTGTTGCCCAATTAAACGGCGAAAAAGTGACTTCAGCTATTGATGTTA CTGCCGGATTAGATACCGAAACACCGCCAAAGCCATTCTCTGGCATGGAAGAAGTGACCTTCACGCCAGATGGTAAGCAT GTAGTTTATACGGCTAAAGCACCGGGTAAAGATCAGGCTTGGATCACTAATTACGATTTATGGAAAGTGAGTGTGGCTGG TGGCGAGGCTGAAAACTTAACCGAGTCGAATAAGGCTTGGGATGCACACCCAACGTATTCAGCCGATGGCCGTTATCTGG CCTATTTCGCCATGACAAAACCTGGCTTTGAAGCCGATCGCTACCGCATTATTTTGCGTGATACCGTAACGGGCCAAGAG AAAGAAGTGGCGCCGCTATGGGATCGCAGCCCAAGCTCTCTAGCTTTTGGTAAAGACAACAAAACATTATATGTGACTGC ACAAGATGTTGGTCAGGTATCAATCTTTGAAGTGAATACCCAGTTTGGTGATGTTAAGACCATCTATAACGAAGGTAGCA ACAGCATCGTTGGTGTGAATAATGACAAGATTATCTTTAGTCATAAATCGCTAGTTGAGCCAGGCGATCTTTATACCATC AACCTAGACGGTCAAAACCTTAATCGTGTGACTGAAGTTAACAAAGACAAGTTAGCTAAAGTTAACTTTGGTGAATACCA GCAATTTAGCTTTAAGGGCTGGAATAACGAAGAAGTATATGGCTATTGGATTAAGCCTTCAAACTACAAGGCTGGTGAGA AGTACCCCATTGCTTTCTTAGTGCACGGTGGCCCACAAGGATCATTTGGTAACTCATTTAGCAGCCGCTGGAACCCTCAG TTATGGGCTGGAGCGGGTTATGGTGTGGTGATGATCGATTTCCATGGCTCAACTGGTTATGGCCAAGCGTTTACTGATTC AATCACTCAAGATTGGGGCGGCAAGCCACTTGAAGATCTGCAAAAAGGTTTAGCGGCGGTGACTAAGCAGCAGAAGTGGT TAGACGGTGATAATGCTTGTGCACTTGGAGGTTCATACGGTGGATACATGATGAACTGGATCCAGGGTAACTGGAATGAC GGTTTCAAGTGCCTAGTGAATCACGCTGGTCTATTTGATATGCGCTCTATGTACTATGTAACTGAAGAGCTTTGGTTCCC AGAGTTTGAGTTTGGCGGTACCTACGAGAAGAACAAAGAGCTATACGAGAAGTTTAACCCAGTGAATTATGTAGAGAACT GGAAGACTCCTATGCTAGTTATCCATGGCGAGAAAGACTTCCGTGTTCCATACGGTCAAGGCCTCGCGGCATTCACCTAC ATGCAGCGCAATGGGATCCCATCAGAGTTACTCATCTATCCAGATGAAAACCACTGGATCTTAACCCCTGAAAACCTAGA GCAGTGGTACGCCAACGTACTAGGCTGGATGGATCGCTGGACAGAGAAGTAA
Upstream 100 bases:
>100_bases AACATAAAGTACAAGTAGTTGAGCAGACTAGTATCAATCACAAATTGATCGCACCACACGTTTAACTAATCCCTTTAACT ATAAGAATAAGATTATAACG
Downstream 100 bases:
>100_bases GTTTAACTGTTAGTGATGTTAGCGGCATAAATTGAAAGCCAGAACTTAAGTTCTGGCTTTTTTTTGCGAAAATCAGCTTG TGCTAGCGACTTTTATTGCG
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK
Sequences:
>Translated_683_residues MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK >Mature_683_residues MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=363, Percent_Identity=23.4159779614325, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI18450280, Length=255, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI37577089, Length=255, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI194394146, Length=258, Percent_Identity=27.5193798449612, Blast_Score=83, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25149159, Length=369, Percent_Identity=24.1192411924119, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17552908, Length=267, Percent_Identity=23.5955056179775, Blast_Score=90, Evalue=5e-18, Organism=Caenorhabditis elegans, GI25144537, Length=484, Percent_Identity=21.6942148760331, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25144540, Length=395, Percent_Identity=22.7848101265823, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI45551969, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI45550825, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI45553511, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 76300; Mature: 76300
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAE CCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC GEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDG CCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECC GEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLACSKDKFTAEAERDTTGREYKQ CCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHH LMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH HHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCE VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTK EEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC PGFEADRYRIILRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNT CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEC QFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTINLDGQNLNRVTEVNKDKLAK CCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHHEEE VNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ ECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNAC EEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE ALGGSYGGYMMNWIQGNWNDGFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKE EECCCCCCEEEEEEECCCCCCHHEEECCCCCHHHHHHHEEHHHHCCCCCCCCCCCCCCHH LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTYMQRNGIPSELLIYPDENHWI HHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCEE LTPENLEQWYANVLGWMDRWTEK ECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAE CCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC GEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDG CCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECC GEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLACSKDKFTAEAERDTTGREYKQ CCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHH LMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH HHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCE VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTK EEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC PGFEADRYRIILRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNT CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEC QFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTINLDGQNLNRVTEVNKDKLAK CCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHHEEE VNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ ECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNAC EEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE ALGGSYGGYMMNWIQGNWNDGFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKE EECCCCCCEEEEEEECCCCCCHHEEECCCCCHHHHHHHEEHHHHCCCCCCCCCCCCCCHH LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTYMQRNGIPSELLIYPDENHWI HHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCEE LTPENLEQWYANVLGWMDRWTEK ECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]