| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961850
Identifier: 157961850
GI number: 157961850
Start: 2454973
End: 2456736
Strand: Reverse
Name: 157961850
Synonym: Spea_2029
Alternate gene names: NA
Gene position: 2456736-2454973 (Counterclockwise)
Preceding gene: 157961851
Following gene: 157961849
Centisome position: 47.48
GC content: 42.23
Gene sequence:
>1764_bases ATGAAGAATATTAGATTTGAATTTAATTGTACCCGTGAAGTCCCTTTTTACGCACACCTTTGCAATCAATACCTGCAAAA CGAACAGTATGATGTAACCATAGGAAAAAACGATAACCTTTATTATATCGAGGCTAAAGGTGAACAGAGTCAACTTGAAG CTCTCGCCGACGCTATAGCTAATGATTTCTTAATTTCTACTTGGCTAGTAAAGCCACAGATCAGTGCTATCGAAACGCCA TGTGGTACAAAAAAACTTCTCGAAACAACTGAGCTAGAACTTGAGTATTGTCAGCATTGCCAACCCCAGCTTGGTGATAA TCAAGCTGCCCACTTTGGAGAAATAGGATTTAACTGCCCTTGCTGCATGGCTCACACCCGCATATCTGCCGATGAGCAAG CGGTTTCCTTAGCCGATGCCAGAGCGCTAGTGAAAAAGCTCGATAAATTAGGCTCGATAGAGCTCCCACAAGGGAATAAT GGCTTCGGTACCATTATCAGTTTCCAACCCATTGAAAACCAATCCCTTGAAGCTCGTCAGCAATTGGTGATCTGTAATCC AAATAATTTGCACGCACACTTCTGTGTTAACGATAGCCAAATACTGGCGCTTTCGAGTATTGAAAAGCCTTTCATTAAAG CGCGACCAATCAGTAGCCATACTCGACTCAAGCAGCCCATATATGAGCTCTGTTTCGCCAAGTCGCGCTTATTACTGGTG ATCTGCGAAATCATGCGCCAACAAGGCATTGATTACGTCTATATTGCTAACAGTCAAAACCCTAAGATTGCTATGGTTGA GGCTAAATGGTCATTGATTGATACGCCGTCATCGGCCCAAAAGCTCTTCATCAATGCGGTTCGTCAACCTTTACACGATG ATGCTCAAGCAGGAAACTACCAAGCGCACTGGACTGAAAAACATATTGAGATCACCGCAGATAAGCACAGTGTCAATCAA GGCAATGCTATAACACCTATCAATAATGCCGCAAATTGTGCACTGCATGCTGCAACGATTAATGATAAGAAACCGAAGAA CATCGCAGCCTTATATTTCAGTAATACAAGTAAGACTCAGATAGTCACTTTAGATGGCAAACAGCAACTTGAGCTATTTT TCGAGTTTCCAAGTTTACCCGATAATGGCTACGACATAGTGCATCATCTTGAGCTCTCGCCGCAGAAAACACTATTGGAT AAATTTAAAACTCTTTATCCAGATGATTACTTAAAACTTCTCTCCTTAAAGCTTACCCAACCAACTGATAATATTGAAAC TTTATGGGCCATTGCAGCAATATTTCTTGGCGCAACAAGTCAAACAAACCAAACGAGGGCATTAAGCAAAACGGAGCTTT GCGATTTTGTAGTCGCCCGCGCCATGTGTCATAAAGGAGCCAATGCCCCCCGGGTCGATTTCCCATTAACTCGAGGTGAA GCATTTAGAAGCCTTAATTGGTGCAAGACTTTAGGCAGTATTATCAGCTTTAGACTCGCAGAAGAAGAAAACGTCGACAA ACTCGCCTTTGGTATGCATGACTCTTTTGCTGATTATATTTGTAACTGGATTGAGCATCTGGATCAAAATATCAATATTA AGTCCGTTGTGATCGCCGGTAATAGTTTTGCTAATGAGGTTCTAGCACAAAGAGTCGTCCTGCGTCTTGGGAAGAACTTT AGCCTCAACACTAATCCACAGATGGATCTTGATGGGCTGAATATTGCAGTAGGTGCATTGTATCTTAAGCAGCGTAGACA CTAA
Upstream 100 bases:
>100_bases CTGAGCCACATGGACTCTTTAGGCGTTACTCACCAACGTATTGCAAACATTGATATTAACAGTCTCATTCCCGACTCTTA TAAACGTGGCTTAACTGTAG
Downstream 100 bases:
>100_bases GTAGCAGTGACTGTATCCATGACTAAGAATCTGACTAAAAGTCGTTTATGTGTAAAGATCACCGGCATCGTTCAAGGTGT CGGTTTTCGTCCCTATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MKNIRFEFNCTREVPFYAHLCNQYLQNEQYDVTIGKNDNLYYIEAKGEQSQLEALADAIANDFLISTWLVKPQISAIETP CGTKKLLETTELELEYCQHCQPQLGDNQAAHFGEIGFNCPCCMAHTRISADEQAVSLADARALVKKLDKLGSIELPQGNN GFGTIISFQPIENQSLEARQQLVICNPNNLHAHFCVNDSQILALSSIEKPFIKARPISSHTRLKQPIYELCFAKSRLLLV ICEIMRQQGIDYVYIANSQNPKIAMVEAKWSLIDTPSSAQKLFINAVRQPLHDDAQAGNYQAHWTEKHIEITADKHSVNQ GNAITPINNAANCALHAATINDKKPKNIAALYFSNTSKTQIVTLDGKQQLELFFEFPSLPDNGYDIVHHLELSPQKTLLD KFKTLYPDDYLKLLSLKLTQPTDNIETLWAIAAIFLGATSQTNQTRALSKTELCDFVVARAMCHKGANAPRVDFPLTRGE AFRSLNWCKTLGSIISFRLAEEENVDKLAFGMHDSFADYICNWIEHLDQNINIKSVVIAGNSFANEVLAQRVVLRLGKNF SLNTNPQMDLDGLNIAVGALYLKQRRH
Sequences:
>Translated_587_residues MKNIRFEFNCTREVPFYAHLCNQYLQNEQYDVTIGKNDNLYYIEAKGEQSQLEALADAIANDFLISTWLVKPQISAIETP CGTKKLLETTELELEYCQHCQPQLGDNQAAHFGEIGFNCPCCMAHTRISADEQAVSLADARALVKKLDKLGSIELPQGNN GFGTIISFQPIENQSLEARQQLVICNPNNLHAHFCVNDSQILALSSIEKPFIKARPISSHTRLKQPIYELCFAKSRLLLV ICEIMRQQGIDYVYIANSQNPKIAMVEAKWSLIDTPSSAQKLFINAVRQPLHDDAQAGNYQAHWTEKHIEITADKHSVNQ GNAITPINNAANCALHAATINDKKPKNIAALYFSNTSKTQIVTLDGKQQLELFFEFPSLPDNGYDIVHHLELSPQKTLLD KFKTLYPDDYLKLLSLKLTQPTDNIETLWAIAAIFLGATSQTNQTRALSKTELCDFVVARAMCHKGANAPRVDFPLTRGE AFRSLNWCKTLGSIISFRLAEEENVDKLAFGMHDSFADYICNWIEHLDQNINIKSVVIAGNSFANEVLAQRVVLRLGKNF SLNTNPQMDLDGLNIAVGALYLKQRRH >Mature_587_residues MKNIRFEFNCTREVPFYAHLCNQYLQNEQYDVTIGKNDNLYYIEAKGEQSQLEALADAIANDFLISTWLVKPQISAIETP CGTKKLLETTELELEYCQHCQPQLGDNQAAHFGEIGFNCPCCMAHTRISADEQAVSLADARALVKKLDKLGSIELPQGNN GFGTIISFQPIENQSLEARQQLVICNPNNLHAHFCVNDSQILALSSIEKPFIKARPISSHTRLKQPIYELCFAKSRLLLV ICEIMRQQGIDYVYIANSQNPKIAMVEAKWSLIDTPSSAQKLFINAVRQPLHDDAQAGNYQAHWTEKHIEITADKHSVNQ GNAITPINNAANCALHAATINDKKPKNIAALYFSNTSKTQIVTLDGKQQLELFFEFPSLPDNGYDIVHHLELSPQKTLLD KFKTLYPDDYLKLLSLKLTQPTDNIETLWAIAAIFLGATSQTNQTRALSKTELCDFVVARAMCHKGANAPRVDFPLTRGE AFRSLNWCKTLGSIISFRLAEEENVDKLAFGMHDSFADYICNWIEHLDQNINIKSVVIAGNSFANEVLAQRVVLRLGKNF SLNTNPQMDLDGLNIAVGALYLKQRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65914; Mature: 65914
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIRFEFNCTREVPFYAHLCNQYLQNEQYDVTIGKNDNLYYIEAKGEQSQLEALADAIA CCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHH NDFLISTWLVKPQISAIETPCGTKKLLETTELELEYCQHCQPQLGDNQAAHFGEIGFNCP HHHHHEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC CCMAHTRISADEQAVSLADARALVKKLDKLGSIELPQGNNGFGTIISFQPIENQSLEARQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCC QLVICNPNNLHAHFCVNDSQILALSSIEKPFIKARPISSHTRLKQPIYELCFAKSRLLLV EEEEECCCCEEEEEEECCCCEEEEHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHH ICEIMRQQGIDYVYIANSQNPKIAMVEAKWSLIDTPSSAQKLFINAVRQPLHDDAQAGNY HHHHHHHCCCCEEEEECCCCCEEEEEEECEEEECCCCHHHHHHHHHHHCCCCCCCCCCCE QAHWTEKHIEITADKHSVNQGNAITPINNAANCALHAATINDKKPKNIAALYFSNTSKTQ EEEEEECEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEE IVTLDGKQQLELFFEFPSLPDNGYDIVHHLELSPQKTLLDKFKTLYPDDYLKLLSLKLTQ EEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHEEECC PTDNIETLWAIAAIFLGATSQTNQTRALSKTELCDFVVARAMCHKGANAPRVDFPLTRGE CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH AFRSLNWCKTLGSIISFRLAEEENVDKLAFGMHDSFADYICNWIEHLDQNINIKSVVIAG HHHHHHHHHHHHHHHHEHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC NSFANEVLAQRVVLRLGKNFSLNTNPQMDLDGLNIAVGALYLKQRRH CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKNIRFEFNCTREVPFYAHLCNQYLQNEQYDVTIGKNDNLYYIEAKGEQSQLEALADAIA CCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHH NDFLISTWLVKPQISAIETPCGTKKLLETTELELEYCQHCQPQLGDNQAAHFGEIGFNCP HHHHHEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC CCMAHTRISADEQAVSLADARALVKKLDKLGSIELPQGNNGFGTIISFQPIENQSLEARQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCC QLVICNPNNLHAHFCVNDSQILALSSIEKPFIKARPISSHTRLKQPIYELCFAKSRLLLV EEEEECCCCEEEEEEECCCCEEEEHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHH ICEIMRQQGIDYVYIANSQNPKIAMVEAKWSLIDTPSSAQKLFINAVRQPLHDDAQAGNY HHHHHHHCCCCEEEEECCCCCEEEEEEECEEEECCCCHHHHHHHHHHHCCCCCCCCCCCE QAHWTEKHIEITADKHSVNQGNAITPINNAANCALHAATINDKKPKNIAALYFSNTSKTQ EEEEEECEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEE IVTLDGKQQLELFFEFPSLPDNGYDIVHHLELSPQKTLLDKFKTLYPDDYLKLLSLKLTQ EEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHEEECC PTDNIETLWAIAAIFLGATSQTNQTRALSKTELCDFVVARAMCHKGANAPRVDFPLTRGE CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH AFRSLNWCKTLGSIISFRLAEEENVDKLAFGMHDSFADYICNWIEHLDQNINIKSVVIAG HHHHHHHHHHHHHHHHEHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC NSFANEVLAQRVVLRLGKNFSLNTNPQMDLDGLNIAVGALYLKQRRH CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA