Click here to switch to the map view.

The map label for this gene is yeiE [H]

Identifier: 157961500

GI number: 157961500

Start: 2032478

End: 2033383

Strand: Reverse

Name: yeiE [H]

Synonym: Spea_1675

Alternate gene names: 157961500

Gene position: 2033383-2032478 (Counterclockwise)

Preceding gene: 157961504

Following gene: 157961498

Centisome position: 39.3

GC content: 44.04

Gene sequence:

>906_bases
ATGAAGTATTCACTCAAGCAAATCACCGTTTTTGACGCCGTAGCGAGCCTAGAAAGTGTCAGTGCTGCAGCAAGAAAATT
ATCGATGACCCAATCGGCAGTCAGTATGTCGCTTGGACAATTGGAAAATCTGCTAGGGCGTCCACTGTTTATCCGCCAAG
GAAATCGGCTAACATTAAGCCATTGGGGAAACTGGTTACGTCCCAAAGCGAGACGCTTACTGCAAGAGGCCCAACATATC
GAATTAGGTCTTCATGAACAGCACCTTATTAGCGGTCAATTCAGGTTGTGCTCAAGCCAAACCGCTGCTGAACATTTGAT
CCCAGAACTCATCAGTAGAATTGATACTGATTTTCCTGAGCTAAGAATAGAACTTTCGGTAGAAAACACCGAAAATGTGA
TTGAAGGCTTACTCAACTATGAGTTCGATCTCGGGATTATTGAGGGGAGAAATGACGACTCTAGATTACATAAAGAGAAG
TGGATTGATGATCACCTAGTAGTCATTTCATCACCCAATCACCCCTATGCCAAACATGCAAGCGCTAGTTTATCTCAACT
AGAGCAAGCAAAATGGGTTTTACGAGAGCAAGGTGCCGGAACAAGAAGAATATTCGAAGGGGCTATTCACGGTATTATCG
AAAAGCTTAATGTGTGGAAGGAATACGAACAGGTTCCGGTCTTAAAGGCTTTAGTTAAAAATGGACAATATATTAGCAGC
CTACCCTATCTGGATGTTGAGAAGGAAGTTGCTAGCGGTGAGTTGGTTATCCTGCCTACCCCCCAAATTAACATGCAGCG
TCACCTTTCCTTCATCTGGCGGGCAGACTCAGGTGAAAACCCTTTACGGGACTGTCTTATCACAGAGGCAAAAAGATTGT
GCCGTAATCGGCAGATAAAGAAGTAA

Upstream 100 bases:

>100_bases
TACACCTCTATACACACTTTAAAATCGACGCCTGAACCATCAATTTTATTGATAGTTTCAATTGTCGTTATTTTCATATA
GGGAAGCCGTAGGTATACAG

Downstream 100 bases:

>100_bases
AAAAAACGGGACGATAATCATCGTCCCGTTTTATCTTTTTAGCCTAAAGATTTAGACTCTATAAATGTCGCACACTTTTT
TGGCTATCGCCTCACGCGTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKYSLKQITVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWGNWLRPKARRLLQEAQHI
ELGLHEQHLISGQFRLCSSQTAAEHLIPELISRIDTDFPELRIELSVENTENVIEGLLNYEFDLGIIEGRNDDSRLHKEK
WIDDHLVVISSPNHPYAKHASASLSQLEQAKWVLREQGAGTRRIFEGAIHGIIEKLNVWKEYEQVPVLKALVKNGQYISS
LPYLDVEKEVASGELVILPTPQINMQRHLSFIWRADSGENPLRDCLITEAKRLCRNRQIKK

Sequences:

>Translated_301_residues
MKYSLKQITVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWGNWLRPKARRLLQEAQHI
ELGLHEQHLISGQFRLCSSQTAAEHLIPELISRIDTDFPELRIELSVENTENVIEGLLNYEFDLGIIEGRNDDSRLHKEK
WIDDHLVVISSPNHPYAKHASASLSQLEQAKWVLREQGAGTRRIFEGAIHGIIEKLNVWKEYEQVPVLKALVKNGQYISS
LPYLDVEKEVASGELVILPTPQINMQRHLSFIWRADSGENPLRDCLITEAKRLCRNRQIKK
>Mature_301_residues
MKYSLKQITVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWGNWLRPKARRLLQEAQHI
ELGLHEQHLISGQFRLCSSQTAAEHLIPELISRIDTDFPELRIELSVENTENVIEGLLNYEFDLGIIEGRNDDSRLHKEK
WIDDHLVVISSPNHPYAKHASASLSQLEQAKWVLREQGAGTRRIFEGAIHGIIEKLNVWKEYEQVPVLKALVKNGQYISS
LPYLDVEKEVASGELVILPTPQINMQRHLSFIWRADSGENPLRDCLITEAKRLCRNRQIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=280, Percent_Identity=35, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788748, Length=278, Percent_Identity=29.8561151079137, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI145693105, Length=282, Percent_Identity=24.822695035461, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787601, Length=300, Percent_Identity=25.3333333333333, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082132, Length=264, Percent_Identity=25.3787878787879, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI157672245, Length=198, Percent_Identity=29.7979797979798, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787806, Length=241, Percent_Identity=26.5560165975104, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788296, Length=193, Percent_Identity=31.6062176165803, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87081904, Length=291, Percent_Identity=25.4295532646048, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788887, Length=299, Percent_Identity=22.4080267558528, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786401, Length=278, Percent_Identity=24.4604316546763, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790399, Length=281, Percent_Identity=21.7081850533808, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788297, Length=242, Percent_Identity=23.5537190082645, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788626, Length=238, Percent_Identity=26.4705882352941, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34308; Mature: 34308

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLKQITVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEHH
HWGNWLRPKARRLLQEAQHIELGLHEQHLISGQFRLCSSQTAAEHLIPELISRIDTDFPE
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCC
LRIELSVENTENVIEGLLNYEFDLGIIEGRNDDSRLHKEKWIDDHLVVISSPNHPYAKHA
EEEEEEECCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHH
SASLSQLEQAKWVLREQGAGTRRIFEGAIHGIIEKLNVWKEYEQVPVLKALVKNGQYISS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
LPYLDVEKEVASGELVILPTPQINMQRHLSFIWRADSGENPLRDCLITEAKRLCRNRQIK
CCCCCCHHHHCCCCEEEEECCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
K
C
>Mature Secondary Structure
MKYSLKQITVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEHH
HWGNWLRPKARRLLQEAQHIELGLHEQHLISGQFRLCSSQTAAEHLIPELISRIDTDFPE
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCC
LRIELSVENTENVIEGLLNYEFDLGIIEGRNDDSRLHKEKWIDDHLVVISSPNHPYAKHA
EEEEEEECCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCHHHH
SASLSQLEQAKWVLREQGAGTRRIFEGAIHGIIEKLNVWKEYEQVPVLKALVKNGQYISS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
LPYLDVEKEVASGELVILPTPQINMQRHLSFIWRADSGENPLRDCLITEAKRLCRNRQIK
CCCCCCHHHHCCCCEEEEECCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]