Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961498

Identifier: 157961498

GI number: 157961498

Start: 2028503

End: 2030035

Strand: Reverse

Name: 157961498

Synonym: Spea_1673

Alternate gene names: NA

Gene position: 2030035-2028503 (Counterclockwise)

Preceding gene: 157961500

Following gene: 157961497

Centisome position: 39.23

GC content: 45.86

Gene sequence:

>1533_bases
ATGTCAGAAACAGTGAAAAACGAACAAATGGAAGACTCGACGAAATCTTATCGCGAGCTTCACCGTCCAGCGTCTGAGTT
TGAAACTCGTGAAGAGTACTTAGACAATGAGCTGAAAATCATGAAGCCTAGACGTTGGGGTCTAAACCTTCCAGGTCGTG
ATTTCCGTTTTGAATGGGAAGATTTTGTCCCAGCTATTGCAGGTACTATTGGTATTACCGTTATGTACTCGGCCGTTATG
GCAGCTTGGGCTGCGGGTCTTAGCGAAAGATGGGATCATATTAACCTAGGCGCAGAATTTGCGACTCAGGTTGTTCGTGT
TGAAATGCTTATTCCAGCGCTACTATTCTGTATCCTCAGCTCAGGCTTTTTTAACCCAAAAGCTAACTTAGCTGGTAACC
ATGGCCCGATGATCCCTCTTATCGGTGCGATTGCCTTGGCTGGCGCACATCCATTAGCTCTGGCGATCTTACTGGGCGTG
TTTGGTCTCATATTAAGCTATGTAAAAGGTGGTTCTCGCTTAGTCAACCTGACCAGCAGCGGGGTTGCAGGCGGCCTATT
AGTCTTCCTTGGCTTTATGGGCGCTGAAGGTCAAATTAGTTCTCTATTTGATTGGGCTAGTAACCTACAGTCTAAACATA
ACCTGGATTACAGCTTAGGTTATGTAGCCTTCTTTATCTTACTTGCCAATGTGGTCTTATATGCCGTTTTAGCAAAGATT
GGTAAGCGTTGGCTAGCAATTCCACTGTGTTCTATTGCTGCAGTAGCGATGGCATTCGGCTTAGGTGCAGGCCTAGATCT
ACAATTTGTGACTGAGCCTGGGATTCCGAACCTAAACCCTGTGTACTGGTGGGGTTCTACGGAACATGGTTGGCAGTTAG
GCTTACCTAACCTACAACATTTCATTGCTTCTCTACCTTTTGCAATCTTGGCCGTTGCTATGTGGTCTCCAGACTTCTTA
GGGCACCGTATTTTCCAAGAGCTTAACTACCCTAAAGGCGCAGAGAAGGTATTAATGGACGTTGATGACACTATGACTAC
CTGTTCACTGCGTCAAATCGTTGGTACAGCTGTAGGTGGTGGTAACATTACTTCATCTTGGGGAACTTATATGATCCCTG
CAGCAACGGCAAAACGTCCAATTCCTGCTGGTGCAATCTTACTGGGTACCCTGTGTATCATCGTCGCTATTATTGGTTAC
CCTATGGATATCGCAGTATGGCAACCAGTAATGTCTATCGCACTACTTGTTGGCGTATTCTTGCCTCTACTTGAAGCGGG
TATGCAGATGGTGAAGGACACTAAGAGCAGCCAATCTGCCGGTATCTGTATTTTTGCCGCGTTTGTTGCAAACCCAGTTC
TGGCTTGGGCATTAACTATGTTCCTAGACAATAACGGACTGATCGGTGACAAAGAGCGTGCTAAATCACTATCTGTGGTT
GACCGTATCGTTATTCCAGGTCTTGCTTTTGTGATCTGTTTAGCGGCTATGCTTGCAGTGGGTATGATCACTGGTATCCC
AGCTCTTTTATAA

Upstream 100 bases:

>100_bases
GCTAAGCGAGCGCCTAATACTAAAGTTAATACTCAAGGACCACTAAAAGTTGTCATCGCATTAGATGAATCACTATGTTC
TTCTCGGAGAATGAGAAATT

Downstream 100 bases:

>100_bases
AATAGATAGCGAGAAGAGTGACTCTTCTCGCTTCCTAACACTATCATCAATGTTACCGATAATAGGTAGCAGAACATATT
AAAACACTTTGTCATCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Xanthine/Uracil/Vitamin C Permease; LOW QUALITY PROTEIN Integral Membrane Protein; Permease Family Protein

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSETVKNEQMEDSTKSYRELHRPASEFETREEYLDNELKIMKPRRWGLNLPGRDFRFEWEDFVPAIAGTIGITVMYSAVM
AAWAAGLSERWDHINLGAEFATQVVRVEMLIPALLFCILSSGFFNPKANLAGNHGPMIPLIGAIALAGAHPLALAILLGV
FGLILSYVKGGSRLVNLTSSGVAGGLLVFLGFMGAEGQISSLFDWASNLQSKHNLDYSLGYVAFFILLANVVLYAVLAKI
GKRWLAIPLCSIAAVAMAFGLGAGLDLQFVTEPGIPNLNPVYWWGSTEHGWQLGLPNLQHFIASLPFAILAVAMWSPDFL
GHRIFQELNYPKGAEKVLMDVDDTMTTCSLRQIVGTAVGGGNITSSWGTYMIPAATAKRPIPAGAILLGTLCIIVAIIGY
PMDIAVWQPVMSIALLVGVFLPLLEAGMQMVKDTKSSQSAGICIFAAFVANPVLAWALTMFLDNNGLIGDKERAKSLSVV
DRIVIPGLAFVICLAAMLAVGMITGIPALL

Sequences:

>Translated_510_residues
MSETVKNEQMEDSTKSYRELHRPASEFETREEYLDNELKIMKPRRWGLNLPGRDFRFEWEDFVPAIAGTIGITVMYSAVM
AAWAAGLSERWDHINLGAEFATQVVRVEMLIPALLFCILSSGFFNPKANLAGNHGPMIPLIGAIALAGAHPLALAILLGV
FGLILSYVKGGSRLVNLTSSGVAGGLLVFLGFMGAEGQISSLFDWASNLQSKHNLDYSLGYVAFFILLANVVLYAVLAKI
GKRWLAIPLCSIAAVAMAFGLGAGLDLQFVTEPGIPNLNPVYWWGSTEHGWQLGLPNLQHFIASLPFAILAVAMWSPDFL
GHRIFQELNYPKGAEKVLMDVDDTMTTCSLRQIVGTAVGGGNITSSWGTYMIPAATAKRPIPAGAILLGTLCIIVAIIGY
PMDIAVWQPVMSIALLVGVFLPLLEAGMQMVKDTKSSQSAGICIFAAFVANPVLAWALTMFLDNNGLIGDKERAKSLSVV
DRIVIPGLAFVICLAAMLAVGMITGIPALL
>Mature_509_residues
SETVKNEQMEDSTKSYRELHRPASEFETREEYLDNELKIMKPRRWGLNLPGRDFRFEWEDFVPAIAGTIGITVMYSAVMA
AWAAGLSERWDHINLGAEFATQVVRVEMLIPALLFCILSSGFFNPKANLAGNHGPMIPLIGAIALAGAHPLALAILLGVF
GLILSYVKGGSRLVNLTSSGVAGGLLVFLGFMGAEGQISSLFDWASNLQSKHNLDYSLGYVAFFILLANVVLYAVLAKIG
KRWLAIPLCSIAAVAMAFGLGAGLDLQFVTEPGIPNLNPVYWWGSTEHGWQLGLPNLQHFIASLPFAILAVAMWSPDFLG
HRIFQELNYPKGAEKVLMDVDDTMTTCSLRQIVGTAVGGGNITSSWGTYMIPAATAKRPIPAGAILLGTLCIIVAIIGYP
MDIAVWQPVMSIALLVGVFLPLLEAGMQMVKDTKSSQSAGICIFAAFVANPVLAWALTMFLDNNGLIGDKERAKSLSVVD
RIVIPGLAFVICLAAMLAVGMITGIPALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54931; Mature: 54800

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETVKNEQMEDSTKSYRELHRPASEFETREEYLDNELKIMKPRRWGLNLPGRDFRFEWE
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH
DFVPAIAGTIGITVMYSAVMAAWAAGLSERWDHINLGAEFATQVVRVEMLIPALLFCILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGFFNPKANLAGNHGPMIPLIGAIALAGAHPLALAILLGVFGLILSYVKGGSRLVNLTSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GVAGGLLVFLGFMGAEGQISSLFDWASNLQSKHNLDYSLGYVAFFILLANVVLYAVLAKI
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKRWLAIPLCSIAAVAMAFGLGAGLDLQFVTEPGIPNLNPVYWWGSTEHGWQLGLPNLQH
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH
FIASLPFAILAVAMWSPDFLGHRIFQELNYPKGAEKVLMDVDDTMTTCSLRQIVGTAVGG
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
GNITSSWGTYMIPAATAKRPIPAGAILLGTLCIIVAIIGYPMDIAVWQPVMSIALLVGVF
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LPLLEAGMQMVKDTKSSQSAGICIFAAFVANPVLAWALTMFLDNNGLIGDKERAKSLSVV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DRIVIPGLAFVICLAAMLAVGMITGIPALL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
>Mature Secondary Structure 
SETVKNEQMEDSTKSYRELHRPASEFETREEYLDNELKIMKPRRWGLNLPGRDFRFEWE
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH
DFVPAIAGTIGITVMYSAVMAAWAAGLSERWDHINLGAEFATQVVRVEMLIPALLFCILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGFFNPKANLAGNHGPMIPLIGAIALAGAHPLALAILLGVFGLILSYVKGGSRLVNLTSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GVAGGLLVFLGFMGAEGQISSLFDWASNLQSKHNLDYSLGYVAFFILLANVVLYAVLAKI
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKRWLAIPLCSIAAVAMAFGLGAGLDLQFVTEPGIPNLNPVYWWGSTEHGWQLGLPNLQH
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH
FIASLPFAILAVAMWSPDFLGHRIFQELNYPKGAEKVLMDVDDTMTTCSLRQIVGTAVGG
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
GNITSSWGTYMIPAATAKRPIPAGAILLGTLCIIVAIIGYPMDIAVWQPVMSIALLVGVF
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LPLLEAGMQMVKDTKSSQSAGICIFAAFVANPVLAWALTMFLDNNGLIGDKERAKSLSVV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DRIVIPGLAFVICLAAMLAVGMITGIPALL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA