| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961504
Identifier: 157961504
GI number: 157961504
Start: 2037215
End: 2038207
Strand: Reverse
Name: 157961504
Synonym: Spea_1679
Alternate gene names: NA
Gene position: 2038207-2037215 (Counterclockwise)
Preceding gene: 157961505
Following gene: 157961500
Centisome position: 39.39
GC content: 45.72
Gene sequence:
>993_bases ATGACGACTAACAATAAACTAAGACACAGAGTGTCACGCCTACCAAGTCCTATGGCAGGACTGGCTTTAGCTATCGGTAG CTTAGGCTGGGCATGGGAAAGTATGGTGCCTAGCATGGATGGTAATGGCCAATTAGTCGGCGCATCAATCGCTGCTGTGA TGCTACTTATGTTAGTGATGAAATTTGTGCTTCACCCAAGAGTGCTCATTGAAGAACTCACTCATCCCGTCGTTGGCAGC GTTATTCCCACCTTTGCAATGGGACTGATGGTGGTATCGGCAGCTCTTGGGCAATTTAATCACGCCGTGGCAGTGGGATT ATGGCTGGTCGCTATCGCCATTCATATTGTGTTCTTATCTATGTTTGTCTATTACCGCGCCATCGACTTTAAGCTTGATC ATATGGTACCAAGTTGGTTCGTACCGCCTATCGGGATCATCGTTGCAGCAGTCTCATTCCCTCACGGTTCTGAAATGCAA TATCAATGGCTAGCCGATGCAATTCTCACGTTTGGTATGGTGAGTTATCTGGTGATGCTACCCGTTATGCTTTATCGATT GATTTTCTGTGAGCCAATTGCCGATGCAGCAAAACCCACTATCGCGATTCTAGCCGCACCAGCGAGCTTATCTTTAGCAG GATACTTAACCATATCCAGTGAGCCATCAATCATTGTCGTAGGGGTATTGCTTACTCTCGCACTCTTGATGACCAGCGTT ATCTATCTGGCTTTCTTTCACTTACTCAGACTGCCATTTTCACCAGGATATGCGGCTTTCACCTTCCCAATGGTTATTGG TGCAACCGCTTTGTTTAAGACTGTACATTGGCTTGTCGCCACATACGGTATGAGCACCTTATCTTTTGACCTACTGATCA CGGCAAAAGTTGAGTTAATCATAGCGACACTTGTGGTTGGCTATGTAGCGTTCAGATATTTGGTCCATTACAAATCGAGT ATTCTTGCCAGCACAGCAATGATTAAGAGTTAA
Upstream 100 bases:
>100_bases GGTTAAATTAAATTGAAGCTAAGCTTAATTTAACTTCAATTTTAATTATCAAGCGAACGGAATAGTATAGCGGCATAAAG ATTGGTTCGAGGAAAACGTA
Downstream 100 bases:
>100_bases CGGTATTAAACTGCTTGTTGAAGGTAAAATTATCGGCCTTCAATTATGAGAATAAAAACGGCATCCAAGGATGCCGTTTT TTATGATTTAAACACTGCTG
Product: C4-dicarboxylate transporter/malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTTNNKLRHRVSRLPSPMAGLALAIGSLGWAWESMVPSMDGNGQLVGASIAAVMLLMLVMKFVLHPRVLIEELTHPVVGS VIPTFAMGLMVVSAALGQFNHAVAVGLWLVAIAIHIVFLSMFVYYRAIDFKLDHMVPSWFVPPIGIIVAAVSFPHGSEMQ YQWLADAILTFGMVSYLVMLPVMLYRLIFCEPIADAAKPTIAILAAPASLSLAGYLTISSEPSIIVVGVLLTLALLMTSV IYLAFFHLLRLPFSPGYAAFTFPMVIGATALFKTVHWLVATYGMSTLSFDLLITAKVELIIATLVVGYVAFRYLVHYKSS ILASTAMIKS
Sequences:
>Translated_330_residues MTTNNKLRHRVSRLPSPMAGLALAIGSLGWAWESMVPSMDGNGQLVGASIAAVMLLMLVMKFVLHPRVLIEELTHPVVGS VIPTFAMGLMVVSAALGQFNHAVAVGLWLVAIAIHIVFLSMFVYYRAIDFKLDHMVPSWFVPPIGIIVAAVSFPHGSEMQ YQWLADAILTFGMVSYLVMLPVMLYRLIFCEPIADAAKPTIAILAAPASLSLAGYLTISSEPSIIVVGVLLTLALLMTSV IYLAFFHLLRLPFSPGYAAFTFPMVIGATALFKTVHWLVATYGMSTLSFDLLITAKVELIIATLVVGYVAFRYLVHYKSS ILASTAMIKS >Mature_329_residues TTNNKLRHRVSRLPSPMAGLALAIGSLGWAWESMVPSMDGNGQLVGASIAAVMLLMLVMKFVLHPRVLIEELTHPVVGSV IPTFAMGLMVVSAALGQFNHAVAVGLWLVAIAIHIVFLSMFVYYRAIDFKLDHMVPSWFVPPIGIIVAAVSFPHGSEMQY QWLADAILTFGMVSYLVMLPVMLYRLIFCEPIADAAKPTIAILAAPASLSLAGYLTISSEPSIIVVGVLLTLALLMTSVI YLAFFHLLRLPFSPGYAAFTFPMVIGATALFKTVHWLVATYGMSTLSFDLLITAKVELIIATLVVGYVAFRYLVHYKSSI LASTAMIKS
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 35852; Mature: 35721
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNKLRHRVSRLPSPMAGLALAIGSLGWAWESMVPSMDGNGQLVGASIAAVMLLMLVM CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH KFVLHPRVLIEELTHPVVGSVIPTFAMGLMVVSAALGQFNHAVAVGLWLVAIAIHIVFLS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFVYYRAIDFKLDHMVPSWFVPPIGIIVAAVSFPHGSEMQYQWLADAILTFGMVSYLVML HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PVMLYRLIFCEPIADAAKPTIAILAAPASLSLAGYLTISSEPSIIVVGVLLTLALLMTSV HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHH IYLAFFHLLRLPFSPGYAAFTFPMVIGATALFKTVHWLVATYGMSTLSFDLLITAKVELI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IATLVVGYVAFRYLVHYKSSILASTAMIKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTNNKLRHRVSRLPSPMAGLALAIGSLGWAWESMVPSMDGNGQLVGASIAAVMLLMLVM CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH KFVLHPRVLIEELTHPVVGSVIPTFAMGLMVVSAALGQFNHAVAVGLWLVAIAIHIVFLS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFVYYRAIDFKLDHMVPSWFVPPIGIIVAAVSFPHGSEMQYQWLADAILTFGMVSYLVML HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PVMLYRLIFCEPIADAAKPTIAILAAPASLSLAGYLTISSEPSIIVVGVLLTLALLMTSV HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHH IYLAFFHLLRLPFSPGYAAFTFPMVIGATALFKTVHWLVATYGMSTLSFDLLITAKVELI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IATLVVGYVAFRYLVHYKSSILASTAMIKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]