| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961420
Identifier: 157961420
GI number: 157961420
Start: 1932743
End: 1933150
Strand: Direct
Name: 157961420
Synonym: Spea_1594
Alternate gene names: NA
Gene position: 1932743-1933150 (Clockwise)
Preceding gene: 157961419
Following gene: 157961421
Centisome position: 37.35
GC content: 44.61
Gene sequence:
>408_bases ATGAAGAACGAAAAGCTAGTCAGAAATCATGATGTCATGAGTCAAGATTATGCCATGATCGATGGGTTGCAAACCGTGGC TGAAGCGATTGAACACGCGGTGAAAAACAAGGTTAACGTGTTATTCGTGAACAAGCGCCATGATGATGACGAGTATGGCA TGGTACTAATGAGTGACATTGCCAAAAAAGTATTGGCACAAGACAGATCGCCTGAGCGAGTCAATGTCTATGAGATCATG GTTAAGCCCGTGCTATGTGTGCCAGGGAGTATGGATGTACGATACAGTGCGCGCTTATTTGATAGGTTCGGTATTACAAA GGCGCCAGTGGTTGAAGAGGGGAGAATTGCAGGACTGGTGAGTTATCACGAAATCGTGCTCAAAGGCATGATTAATAAGA CAAGCTAA
Upstream 100 bases:
>100_bases GTGACTCGGGCAAAGGCATCGCCATTCAAATTGATGTGGAGGACGCCGTCGGAGTCGCTCATCAGGTACAAAAGCTAAGC CATGATATTGAGGATCAAAT
Downstream 100 bases:
>100_bases GCTCACTATCGTCGAGTATAACCGAGCAGGCTATCCACTCGGTTTACCGGCTTTAGCTTTTTAGGCCCGATCTGAAAGTG CTTGAGGCGCTCGCATATAG
Product: signal-transduction protein
Products: NA
Alternate protein names: Signal-Transduction Protein; CBS Domain Containing Protein; CBS Domain Protein; CP12 Polypeptide; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; CP12 Domain Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS
Sequences:
>Translated_135_residues MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS >Mature_135_residues MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15280; Mature: 15280
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH AKKVLAQDRSPERVNVYEIMVKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLV HHHHHHCCCCCCCCHHHHHEECHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH SYHEIVLKGMINKTS HHHHHHHHHHHCCCC >Mature Secondary Structure MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH AKKVLAQDRSPERVNVYEIMVKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLV HHHHHHCCCCCCCCHHHHHEECHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH SYHEIVLKGMINKTS HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA