| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is recX [H]
Identifier: 157961421
GI number: 157961421
Start: 1933349
End: 1934158
Strand: Direct
Name: recX [H]
Synonym: Spea_1595
Alternate gene names: 157961421
Gene position: 1933349-1934158 (Clockwise)
Preceding gene: 157961420
Following gene: 157961423
Centisome position: 37.36
GC content: 42.47
Gene sequence:
>810_bases ATGCAGCGCCCACCATTACGTCAAGCCAAAACCATCGATAATGTGTTTAATAGTGCTTATTGGCATTTGAGCCAGCAGGA TTTCACTATTAATGAAATTCGCACCAAACTCGAACGTAAAACCGAAAACCAAGAATGGATCGATACCGTCCTTGCTAGAC TCATCGAGGGGGGCTACCTAAAAAATGATTTTGACTTTGCCGTGCGTTATTGCGAGCTAGCTTTTAGTCATGAACTCGGT GCTGGGGCAATAAGGCGCAAACTACAACAGCGAGGCGTATCCCTTACAGATATTGATAGCGCAATAGAGCGGGTAACTGA TGAGCAAAATGTCGATGGTTATGAGATGGCAACATCTAGGCTGCTCAGCAGATTTGATAACTTTTATGGCACCAATAAAG AGAAGGTGTATGCACAAATGACGGCAAAAGGCTTTTCTCGAGTAGAAATTGATCACGCATTAGCAGCGCATCCGATGCGT GAAACTTTGCGCAGTAAAATGGCCGTTAAAGCTGACAAAGCGGACTTAAGCACCGAAATTATTAAGTTATATAGCAAGGG AAAAGGTCAAACCCTTATTCAACAGGAGCTTAAGCAGCGACTGATTGATTTAAGCGATTTTGAAGACACCCTGTACCAAT TGACGCTTGCTGGAGATGTTGATTTTTATCAAAGCTGTAAAGTTGAACTAGCTAAGAAGCGCTATGACTTATCGGATTAT AAAGATAAGTCGAAAGCCTATGCCTATTTATCACGTAAGGGCTTCAACAGTGATGAAATCAAAGAGGCGATGAGGCTGGA TGATGAGTAA
Upstream 100 bases:
>100_bases AGCTGCTAACTCGGCTTACCACTTCTAACCTGGGCTCCTCAAGAATGCAGGCTTCTGCTACACTGGCTTTGGTCACTTTT TAATTTAAGTTCAATTCGTT
Downstream 100 bases:
>100_bases TCTACTCAAAATAACTTGTTGTAGGTAAAGTTTCTATATTGAGTAGTCGCTATGTTGGTTCAGCCATAATTTACTCATAT GGCGTAGTAGTTTGTTGATG
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQRPPLRQAKTIDNVFNSAYWHLSQQDFTINEIRTKLERKTENQEWIDTVLARLIEGGYLKNDFDFAVRYCELAFSHELG AGAIRRKLQQRGVSLTDIDSAIERVTDEQNVDGYEMATSRLLSRFDNFYGTNKEKVYAQMTAKGFSRVEIDHALAAHPMR ETLRSKMAVKADKADLSTEIIKLYSKGKGQTLIQQELKQRLIDLSDFEDTLYQLTLAGDVDFYQSCKVELAKKRYDLSDY KDKSKAYAYLSRKGFNSDEIKEAMRLDDE
Sequences:
>Translated_269_residues MQRPPLRQAKTIDNVFNSAYWHLSQQDFTINEIRTKLERKTENQEWIDTVLARLIEGGYLKNDFDFAVRYCELAFSHELG AGAIRRKLQQRGVSLTDIDSAIERVTDEQNVDGYEMATSRLLSRFDNFYGTNKEKVYAQMTAKGFSRVEIDHALAAHPMR ETLRSKMAVKADKADLSTEIIKLYSKGKGQTLIQQELKQRLIDLSDFEDTLYQLTLAGDVDFYQSCKVELAKKRYDLSDY KDKSKAYAYLSRKGFNSDEIKEAMRLDDE >Mature_269_residues MQRPPLRQAKTIDNVFNSAYWHLSQQDFTINEIRTKLERKTENQEWIDTVLARLIEGGYLKNDFDFAVRYCELAFSHELG AGAIRRKLQQRGVSLTDIDSAIERVTDEQNVDGYEMATSRLLSRFDNFYGTNKEKVYAQMTAKGFSRVEIDHALAAHPMR ETLRSKMAVKADKADLSTEIIKLYSKGKGQTLIQQELKQRLIDLSDFEDTLYQLTLAGDVDFYQSCKVELAKKRYDLSDY KDKSKAYAYLSRKGFNSDEIKEAMRLDDE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 31148; Mature: 31148
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPPLRQAKTIDNVFNSAYWHLSQQDFTINEIRTKLERKTENQEWIDTVLARLIEGGYL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC KNDFDFAVRYCELAFSHELGAGAIRRKLQQRGVSLTDIDSAIERVTDEQNVDGYEMATSR CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LLSRFDNFYGTNKEKVYAQMTAKGFSRVEIDHALAAHPMRETLRSKMAVKADKADLSTEI HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKLYSKGKGQTLIQQELKQRLIDLSDFEDTLYQLTLAGDVDFYQSCKVELAKKRYDLSDY HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH KDKSKAYAYLSRKGFNSDEIKEAMRLDDE HHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQRPPLRQAKTIDNVFNSAYWHLSQQDFTINEIRTKLERKTENQEWIDTVLARLIEGGYL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC KNDFDFAVRYCELAFSHELGAGAIRRKLQQRGVSLTDIDSAIERVTDEQNVDGYEMATSR CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LLSRFDNFYGTNKEKVYAQMTAKGFSRVEIDHALAAHPMRETLRSKMAVKADKADLSTEI HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKLYSKGKGQTLIQQELKQRLIDLSDFEDTLYQLTLAGDVDFYQSCKVELAKKRYDLSDY HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH KDKSKAYAYLSRKGFNSDEIKEAMRLDDE HHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA